[{"type":"bigbed","name":"Vista_Enhancers","url":"http://nordlab.genomecenter.ucdavis.edu/CXTF00/VISTA.enhancers.20180710.bed.bb","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"17pt","fontfamily":"sans-serif","fontbold":true,"bedcolor":"rgb(3, 3, 43)"},"metadata":{}},{"type":"bigwig","name":"E12_H3K27Ac","url":"http://nordlab.genomecenter.ucdavis.edu/CXTF00/H3K27ac_5-1_WT_ChIP_CCTTCA_rep1_trimmed.fq.gz.srt.bam.normalizedRPKM.coverage.bw","mode":1,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":127,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":1,"thmin":0,"thmax":150,"thpercentile":100,"height":40,"summeth":1},"metadata":{}},{"type":"bigwig","name":"E12_Emx2","url":"http://nordlab.genomecenter.ucdavis.edu/CXTF00/Emx2PosE12_5_S16_L003_R1_001_trimmed.fq.gz.srt.bam.normalizedRPKM.coverage.bw","mode":1,"qtc":{"anglescale":1,"pr":236,"pg":20,"pb":20,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":40,"summeth":1},"metadata":{}},{"type":"bigwig","name":"E12_CTF1","url":"http://nordlab.genomecenter.ucdavis.edu/CXTF00/CoupTF1_e12.5_ChIP_AAGACG_L007_rep1_trimmed.fq.gz.srt.bam.normalizedRPKM.coverage.bw","mode":1,"qtc":{"anglescale":1,"pr":44,"pg":179,"pb":74,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":40,"summeth":1},"metadata":{}},{"type":"bigwig","name":"E12_Pax6","url":"http://nordlab.genomecenter.ucdavis.edu/CXTF00/Pax6_e12.5_ChIP_CCTTCA_L004_rep1_trimmed.fq.gz.srt.bam.normalizedRPKM.coverage.bw","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":187,"pb":242,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":1,"thmin":0,"thmax":150,"thpercentile":100,"height":40,"summeth":1},"metadata":{}},{"type":"bigwig","name":"E12_Pbx1","url":"http://nordlab.genomecenter.ucdavis.edu/CXTF00/Pbx1_e12.5_ChIP_CGATGT_L001_rep1_trimmed.fq.gz.srt.bam.normalizedRPKM.coverage.bw","mode":1,"qtc":{"anglescale":1,"pr":179,"pg":102,"pb":255,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":1,"thmin":0,"thmax":150,"thpercentile":90,"height":40,"summeth":1},"metadata":{}},{"type":"native_track","list":[{"name":"refGene","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#002EB8"},"metadata":{},"details":{"source":"UCSC Genome Browser","download date":"Nov. 28, 2013"}}]},{"type":"bigbed","name":"H3K27Ac Called Peak","url":"http://nordlab.genomecenter.ucdavis.edu/CXTF00/H3K27ac_Cx_WT_rep1_trim-vs.Input.no_model_peaks.broadPeak.bb","mode":"hide","qtc":{"textcolor":"rgb(255, 0, 127)","bedcolor":"rgb(255, 0, 127)"},"metadata":{}},{"type":"bigbed","name":"Emx2 Called Peak","url":"http://nordlab.genomecenter.ucdavis.edu/CXTF00/Emx2_e12.5_Cx_WT_rep1_trim-vs.Input.no_model_peaks.narrowPeak.bb","mode":"hide","qtc":{"fontsize":"19pt"},"metadata":{}},{"type":"bigbed","name":"Emx2 Called Peak","url":"http://nordlab.genomecenter.ucdavis.edu/CXTF00/Emx2_e12.5_Cx_WT_rep2_trim-vs.Input.no_model_peaks.narrowPeak.bb","mode":"hide","qtc":{"textcolor":"rgb(236, 20, 20)","bedcolor":"rgb(236, 20, 20)"},"metadata":{}},{"type":"hic","name":"E12_PlaqSeq","url":"https://dl.dropboxusercontent.com/s/z4xwbs537zzk9zi/IJ038.IJ056.hic","mode":"hide","qtc":{"pfilterscore":40,"nfilterscore":0,"matrix":"observed","norm":"NONE","unit_res":"BP","bin_size":"10000"},"metadata":{}},{"type":"metadata","vocabulary_set":{"md1":"https://vizhub.wustl.edu/metadata/Experimental_assays","md2":"https://vizhub.wustl.edu/metadata/Institutions","md3":"https://vizhub.wustl.edu/metadata/mouse/Sample-encode"},"show_terms":{"md1":["Assay"],"md3":["Sample"]}},{"type":"coordinate_override","coord":"chr2,61489468,chr2,61663946"}]