[{"type":"bigwig","name":"MEL cell line SMC3 signal","url":"http://epgg-test.wustl.edu/d/mm9/ENCFF001NZP.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":1,"thmin":0,"thmax":100,"thpercentile":90,"height":75,"summeth":1},"metadata":{"md1":["24613"],"md2":["30018"],"md3":["10021"]},"details":{"Antibody accession":"ENCAB000AKX","Assay":"ChIP-seq","Assembly":"mm9","Biological replicate":"","Biosample Age":"","Biosample life stage":"unknown","Biosample organism":"Mus musculus","Biosample phase":"","Biosample sex":"unknown","Biosample subcellular fraction term name":"","Biosample synchronization stage":"","Biosample term id":"EFO:0003971","Biosample term name":"MEL cell line","Biosample treatments":"","Biosample type":"immortalized cell line","Derived from":"","Experiment accession":"ENCSR000ETL","Experiment date released":"2011-09-19","Experiment target":"SMC3-mouse","File accession":"ENCFF001NZP","File download URL":"https://www.encodeproject.org/files/ENCFF001NZP/@@download/ENCFF001NZP.bigWig","File format":"bigWig","Lab":"Michael Snyder, Stanford","Library crosslinking method":"","Library depleted in":"","Library extraction method":"see document","Library fragmentation method":"","Library lysis method":"see document","Library made from":"DNA","Library size range":"","Output type":"signal","Paired end":"","Paired with":"","Platform":"","Project":"ENCODE","RBNS protein concentration":"","Read length":"","Run type":"","Size":"345588870","Technical replicate":"","md5sum":"17d95b9f3be676392133adb0d5d0ae5d"}},{"type":"interaction","name":"HiCCUPS_mES_Cohesin.bed","url":"http://epigenomegateway.wustl.edu/browser/t/1142565101.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":111,"pg":88,"pb":184,"nr":0,"ng":99,"nb":133,"pcolorscore":3,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"ChIA_PET_mES_Cohesin_1.bed","url":"http://epigenomegateway.wustl.edu/browser/t/852900089.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":178,"pb":158,"nr":0,"ng":99,"nb":133,"pcolorscore":3,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"hichipper_RefPeak.bed","url":"http://epigenomegateway.wustl.edu/browser/t/1503698408.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":138,"pg":103,"pb":184,"nr":0,"ng":99,"nb":133,"pcolorscore":9,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"hichipper_PETFilt_RefPeak.bed","url":"http://epigenomegateway.wustl.edu/browser/t/1874367795.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":53,"pg":53,"pb":184,"nr":0,"ng":99,"nb":133,"pcolorscore":300,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"FitHiChIP_P2P_1_CoverageBias.bed","url":"http://epigenomegateway.wustl.edu/browser/t/978766097.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":1,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":155,"pg":110,"pb":184,"nr":0,"ng":99,"nb":133,"pcolorscore":10,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"FitHiChIP_P2P_0_CoverageBias.bed","url":"http://epigenomegateway.wustl.edu/browser/t/1544436180.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":1,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":57,"pg":137,"pb":184,"nr":0,"ng":99,"nb":133,"pcolorscore":37.3508,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"FitHiChIP_P2P_1_ICEBias.bed","url":"http://epigenomegateway.wustl.edu/browser/t/787037146.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":33.5756,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"FitHiChIP_P2P_0_ICEBias.bed","url":"http://epigenomegateway.wustl.edu/browser/t/351208574.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":36.7802,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"FitHiChIP_P2P_0.bed","url":"http://epigenomegateway.wustl.edu/browser/t/84827989.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":84.9791,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50},"metadata":{}},{"type":"native_track","list":[{"name":"refGene","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#002EB8"},"metadata":{},"details":{"source":"UCSC Genome Browser","download date":"Nov. 28, 2013"}},{"name":"rmsk_all","mode":7,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":35,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"showscoreidx":2,"scorenamelst":["Smith-Waterman score","SW score normalized by length","1-divergence%"],"scorescalelst":[{"type":0},{"type":0},{"type":0}],"metadata":{},"categories":{"1":["SINE - short interspersed nuclear elements","#cc0000"],"2":["LINE - long interspersed nuclear element","#FF6600"],"3":["LTR - long terminal repeat element","#006600"],"4":["DNA transposon","#4A72E8"],"5":["Simple repeat, micro-satellite","#AB833B"],"6":["Satellite repeat","#660000"],"7":["Low complexity repeat","#663333"],"8":["RNA repeat","#cc33ff"],"9":["Other repeats","#488E8E"],"10":["Unknown","#5C5C5C"],"-1":["no information","transparent"]}}]},{"type":"interaction","name":"HiCCUPS_mES_Cohesin.bed","url":"http://epigenomegateway.wustl.edu/browser/t/2033592289.txt.gz","mode":"hide","qtc":{"pfilterscore":0,"nfilterscore":0,"pcolorscore":0,"ncolorscore":0},"metadata":{}},{"type":"interaction","name":"HiCCUPS_mES_Cohesin.bed","url":"http://epigenomegateway.wustl.edu/browser/t/629819004.txt.gz","mode":"hide","qtc":{"pfilterscore":0,"nfilterscore":0,"pcolorscore":0,"ncolorscore":0},"metadata":{}},{"type":"interaction","name":"ChIA_PET_mES_Cohesin_1.bed","url":"http://epigenomegateway.wustl.edu/browser/t/1300843314.txt.gz","mode":"hide","qtc":{"pfilterscore":0,"nfilterscore":0,"pcolorscore":0,"ncolorscore":0},"metadata":{}},{"type":"metadata","vocabulary_set":{"md1":"http://vizhub.wustl.edu/metadata/Experimental_assays","md2":"http://vizhub.wustl.edu/metadata/Institutions","md3":"http://vizhub.wustl.edu/metadata/mouse/Sample-encode"},"show_terms":{"md1":["Assay"],"md3":["Sample"]}},{"type":"coordinate_override","coord":"chr1,58743306,chr1,61256688"}]