[{"type":"bigwig","name":"ES-Bruce4 H3K36me3 signal","url":"http://epgg-test.wustl.edu/d/mm9/ENCFF001KDY.bigWig","mode":1,"qtc":{"anglescale":1,"pr":33,"pg":97,"pb":11,"nr":255,"ng":0,"nb":0,"pth":"rgb(23,67,7)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"metadata":{"md4":["22020"],"md5":["30002"],"md6":["10012"]},"details":{"Antibody accession":"ENCAB000ADV","Assay":"ChIP-seq","Assembly":"mm9","Biological replicate":"","Biosample Age":"","Biosample life stage":"embryonic","Biosample organism":"Mus musculus","Biosample phase":"","Biosample sex":"male","Biosample subcellular fraction term name":"","Biosample synchronization stage":"","Biosample term id":"EFO:0005483","Biosample term name":"ES-Bruce4","Biosample treatments":"","Biosample type":"stem cell","Derived from":"","Experiment accession":"ENCSR000CFO","Experiment date released":"2012-09-05","Experiment target":"H3K36me3-mouse","File accession":"ENCFF001KDY","File download URL":"https://www.encodeproject.org/files/ENCFF001KDY/@@download/ENCFF001KDY.bigWig","File format":"bigWig","Lab":"Bing Ren, UCSD","Library crosslinking method":"","Library depleted in":"","Library extraction method":"see document","Library fragmentation method":"","Library lysis method":"see document","Library made from":"DNA","Library size range":"","Output type":"signal","Paired end":"","Paired with":"","Platform":"","Project":"ENCODE","RBNS protein concentration":"","Read length":"","Run type":"","Size":"55980325","Technical replicate":"","md5sum":"7814e690cef224d10802a49778b97ae8"}},{"type":"bigwig","name":"ES-Bruce4 H3K27ac signal","url":"http://epgg-test.wustl.edu/d/mm9/ENCFF001KDN.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":150,"nr":255,"ng":0,"nb":0,"pth":"rgb(0,0,105)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"metadata":{"md4":["22019"],"md5":["30002"],"md6":["10012"]},"details":{"Antibody accession":"ENCAB000ADS","Assay":"ChIP-seq","Assembly":"mm9","Biological replicate":"","Biosample Age":"","Biosample life stage":"embryonic","Biosample organism":"Mus musculus","Biosample phase":"","Biosample sex":"male","Biosample subcellular fraction term name":"","Biosample synchronization stage":"","Biosample term id":"EFO:0005483","Biosample term name":"ES-Bruce4","Biosample treatments":"","Biosample type":"stem cell","Derived from":"","Experiment accession":"ENCSR000CDE","Experiment date released":"2012-03-28","Experiment target":"H3K27ac-mouse","File accession":"ENCFF001KDN","File download URL":"https://www.encodeproject.org/files/ENCFF001KDN/@@download/ENCFF001KDN.bigWig","File format":"bigWig","Lab":"Bing Ren, UCSD","Library crosslinking method":"","Library depleted in":"","Library extraction method":"see document","Library fragmentation method":"","Library lysis method":"see document","Library made from":"DNA","Library size range":"","Output type":"signal","Paired end":"","Paired with":"","Platform":"","Project":"ENCODE","RBNS protein concentration":"","Read length":"","Run type":"","Size":"51066122","Technical replicate":"","md5sum":"62fff3b89a1b22f8a31206ba9ca97f22"}},{"type":"bigwig","name":"ES-Bruce4 H3K4me1 signal","url":"http://epgg-test.wustl.edu/d/mm9/ENCFF001KEH.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":133,"pb":66,"nr":255,"ng":0,"nb":0,"pth":"rgb(0,93,46)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"metadata":{"md4":["22010"],"md5":["30002"],"md6":["10012"]},"details":{"Antibody accession":"ENCAB000ADX","Assay":"ChIP-seq","Assembly":"mm9","Biological replicate":"","Biosample Age":"","Biosample life stage":"embryonic","Biosample organism":"Mus musculus","Biosample phase":"","Biosample sex":"male","Biosample subcellular fraction term name":"","Biosample synchronization stage":"","Biosample term id":"EFO:0005483","Biosample term name":"ES-Bruce4","Biosample treatments":"","Biosample type":"stem cell","Derived from":"","Experiment accession":"ENCSR000CBF","Experiment date released":"2011-06-24","Experiment target":"H3K4me1-mouse","File accession":"ENCFF001KEH","File download URL":"https://www.encodeproject.org/files/ENCFF001KEH/@@download/ENCFF001KEH.bigWig","File format":"bigWig","Lab":"Bing Ren, UCSD","Library crosslinking method":"","Library depleted in":"","Library extraction method":"see document","Library fragmentation method":"","Library lysis method":"see document","Library made from":"DNA","Library size range":"","Output type":"signal","Paired end":"","Paired with":"","Platform":"","Project":"ENCODE","RBNS protein concentration":"","Read length":"","Run type":"","Size":"53661280","Technical replicate":"","md5sum":"7f5a86a7352e7d4283f1fbac2bf5f372"}},{"type":"bigwig","name":"ES-Bruce4 H3K4me3 signal","url":"http://epgg-test.wustl.edu/d/mm9/ENCFF001KEM.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":117,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"rgb(0,81,0)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"metadata":{"md4":["22009"],"md5":["30002"],"md6":["10012"]},"details":{"Antibody accession":"ENCAB000ANL","Assay":"ChIP-seq","Assembly":"mm9","Biological replicate":"","Biosample Age":"","Biosample life stage":"embryonic","Biosample organism":"Mus musculus","Biosample phase":"","Biosample sex":"male","Biosample subcellular fraction term name":"","Biosample synchronization stage":"","Biosample term id":"EFO:0005483","Biosample term name":"ES-Bruce4","Biosample treatments":"","Biosample type":"stem cell","Derived from":"","Experiment accession":"ENCSR000CBG","Experiment date released":"2011-06-24","Experiment target":"H3K4me3-mouse","File accession":"ENCFF001KEM","File download URL":"https://www.encodeproject.org/files/ENCFF001KEM/@@download/ENCFF001KEM.bigWig","File format":"bigWig","Lab":"Bing Ren, UCSD","Library crosslinking method":"","Library depleted in":"","Library extraction method":"see document","Library fragmentation method":"","Library lysis method":"see document","Library made from":"DNA","Library size range":"","Output type":"signal","Paired end":"","Paired with":"","Platform":"","Project":"ENCODE","RBNS protein concentration":"","Read length":"","Run type":"","Size":"30676817","Technical replicate":"","md5sum":"570ab75f95582f9e0428567bed9f5bbb"}},{"type":"bigwig","name":"ES-Bruce4 H3K27me3 signal","url":"http://epgg-test.wustl.edu/d/mm9/ENCFF001KDS.bigWig","mode":1,"qtc":{"anglescale":1,"pr":180,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"rgb(125,0,0)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"metadata":{"md4":["22018"],"md5":["30002"],"md6":["10012"]},"details":{"Antibody accession":"ENCAB000ADT","Assay":"ChIP-seq","Assembly":"mm9","Biological replicate":"","Biosample Age":"","Biosample life stage":"embryonic","Biosample organism":"Mus musculus","Biosample phase":"","Biosample sex":"male","Biosample subcellular fraction term name":"","Biosample synchronization stage":"","Biosample term id":"EFO:0005483","Biosample term name":"ES-Bruce4","Biosample treatments":"","Biosample type":"stem cell","Derived from":"","Experiment accession":"ENCSR000CFN","Experiment date released":"2012-09-05","Experiment target":"H3K27me3-mouse","File accession":"ENCFF001KDS","File download URL":"https://www.encodeproject.org/files/ENCFF001KDS/@@download/ENCFF001KDS.bigWig","File format":"bigWig","Lab":"Bing Ren, UCSD","Library crosslinking method":"","Library depleted in":"","Library extraction method":"see document","Library fragmentation method":"","Library lysis method":"see document","Library made from":"DNA","Library size range":"","Output type":"signal","Paired end":"","Paired with":"","Platform":"","Project":"ENCODE","RBNS protein concentration":"","Read length":"","Run type":"","Size":"71410844","Technical replicate":"","md5sum":"d4e6adc3751b6d1113a4a4a622029ac3"}},{"type":"bigwig","name":"ES-Bruce4 H3K9me3 signal","url":"http://epgg-test.wustl.edu/d/mm9/ENCFF001KDG.bigWig","mode":1,"qtc":{"anglescale":1,"pr":159,"pg":0,"pb":72,"nr":255,"ng":0,"nb":0,"pth":"rgb(111,0,50)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"metadata":{"md4":["22012"],"md5":["30002"],"md6":["10012"]},"details":{"Antibody accession":"ENCAB000ANX","Assay":"ChIP-seq","Assembly":"mm9","Biological replicate":"","Biosample Age":"","Biosample life stage":"embryonic","Biosample organism":"Mus musculus","Biosample phase":"","Biosample sex":"male","Biosample subcellular fraction term name":"","Biosample synchronization stage":"","Biosample term id":"EFO:0005483","Biosample term name":"ES-Bruce4","Biosample treatments":"","Biosample type":"stem cell","Derived from":"","Experiment accession":"ENCSR000CFZ","Experiment date released":"2012-09-05","Experiment target":"H3K9me3-mouse","File accession":"ENCFF001KDG","File download URL":"https://www.encodeproject.org/files/ENCFF001KDG/@@download/ENCFF001KDG.bigWig","File format":"bigWig","Lab":"Bing Ren, UCSD","Library crosslinking method":"","Library depleted in":"","Library extraction method":"see document","Library fragmentation method":"","Library lysis method":"see document","Library made from":"DNA","Library size range":"","Output type":"signal","Paired end":"","Paired with":"","Platform":"","Project":"ENCODE","RBNS protein concentration":"","Read length":"","Run type":"","Size":"82982104","Technical replicate":"","md5sum":"853bdb1efe92e3f753f6f93043020b87"}},{"type":"bigwig","name":"ES-Bruce4 POLR2A signal","url":"http://epgg-test.wustl.edu/d/mm9/ENCFF001LJI.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"metadata":{"md4":["24719"],"md5":["30002"],"md6":["10012"]},"details":{"Antibody accession":"ENCAB281FBQ","Assay":"ChIP-seq","Assembly":"mm9","Biological replicate":"","Biosample Age":"","Biosample life stage":"embryonic","Biosample organism":"Mus musculus","Biosample phase":"","Biosample sex":"male","Biosample subcellular fraction term name":"","Biosample synchronization stage":"","Biosample term id":"EFO:0005483","Biosample term name":"ES-Bruce4","Biosample treatments":"","Biosample type":"stem cell","Derived from":"","Experiment accession":"ENCSR000CCC","Experiment date released":"2011-07-22","Experiment target":"POLR2A-mouse","File accession":"ENCFF001LJI","File download URL":"https://www.encodeproject.org/files/ENCFF001LJI/@@download/ENCFF001LJI.bigWig","File format":"bigWig","Lab":"Bing Ren, UCSD","Library crosslinking method":"","Library depleted in":"","Library extraction method":"see document","Library fragmentation method":"","Library lysis method":"see document","Library made from":"DNA","Library size range":"","Output type":"signal","Paired end":"","Paired with":"","Platform":"","Project":"ENCODE","RBNS protein concentration":"","Read length":"","Run type":"","Size":"76951994","Technical replicate":"","md5sum":"a294a68a4cc6834752848f3a35d6a3e8"}},{"type":"bed","name":"iMN.ES-MN_iNgn2.Isl1.Lhx3_Day4+Dox.ChIP-seq_Isl1-2_rep1_vs-pseudo_JD_(peaks__bed)].bed","url":"http://epigenomegateway.wustl.edu/browser/t/1540144747.txt.gz","mode":6,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":255,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":20,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666","smooth":5},"metadata":{}},{"type":"bed","name":"iMN.ES-MN_iNgn2.Isl1.Lhx3_Day4+Dox-RA-Hh.ChIP-seq_iLhx3-V5_rep1_[MACS_on_data_17_and_data_26_(peaks__bed)]_JD.bed","url":"http://epigenomegateway.wustl.edu/browser/t/986891378.txt.gz","mode":6,"qtc":{"anglescale":1,"pr":173,"pg":112,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":30,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666","smooth":5},"metadata":{}},{"type":"bigwig","name":"ES-Bruce4 CTCF signal","url":"http://epgg-test.wustl.edu/d/mm9/ENCFF001LIR.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"metadata":{"md4":["24001"],"md5":["30002"],"md6":["10012"]},"details":{"Antibody accession":"ENCAB210NHK","Assay":"ChIP-seq","Assembly":"mm9","Biological replicate":"","Biosample Age":"","Biosample life stage":"embryonic","Biosample organism":"Mus musculus","Biosample phase":"","Biosample sex":"male","Biosample subcellular fraction term name":"","Biosample synchronization stage":"","Biosample term id":"EFO:0005483","Biosample term name":"ES-Bruce4","Biosample treatments":"","Biosample type":"stem cell","Derived from":"","Experiment accession":"ENCSR000CCB","Experiment date released":"2011-07-22","Experiment target":"CTCF-mouse","File accession":"ENCFF001LIR","File download URL":"https://www.encodeproject.org/files/ENCFF001LIR/@@download/ENCFF001LIR.bigWig","File format":"bigWig","Lab":"Bing Ren, UCSD","Library crosslinking method":"","Library depleted in":"","Library extraction method":"see document","Library fragmentation method":"","Library lysis method":"see document","Library made from":"DNA","Library size range":"","Output type":"signal","Paired end":"","Paired with":"","Platform":"","Project":"ENCODE","RBNS protein concentration":"","Read length":"","Run type":"","Size":"74672152","Technical replicate":"","md5sum":"cd5bb360fd3b7f6ba363298d9725db24"}},{"type":"interaction","name":"GIS ESCell ChIA-PET interactions","url":"http://egg.wustl.edu/d/mm9/GSE28247_st3ab.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":10,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":10},"metadata":{"md1":["10002"],"md2":["149"]},"geolst":["GSE28247"]},{"type":"interaction","name":"ESCell Hi-C (NcoI 20kb)","url":"http://egg.wustl.edu/d/mm9/Esc_20kb_NcoI.gz","mode":5,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":94.3454228082261,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":10},"metadata":{"md1":["10049"],"md2":["148"]},"geolst":["GSM862722"]},{"type":"native_track","list":[{"name":"refGene","mode":2,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"rgb(0, 0, 0)","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"rgb(105, 105, 105)","bg":null},"metadata":{},"details":{"source":"UCSC Genome Browser","download date":"Nov. 28, 2013"}}]},{"type":"metadata","vocabulary_set":{"md1":"http://vizhub.wustl.edu/metadata/mouse/Samples","md2":"http://vizhub.wustl.edu/metadata/mouse/Mouse_Assay_metadata","md3":"http://vizhub.wustl.edu/metadata/mouse/Mouse_Institution_metadata","md4":"http://vizhub.wustl.edu/metadata/Experimental_assays","md5":"http://vizhub.wustl.edu/metadata/Institutions","md6":"http://vizhub.wustl.edu/metadata/mouse/Sample-encode"},"show_terms":{"md1":["Sample"],"md2":["Assay"],"md4":["Assay"],"md6":["Sample"]}},{"type":"coordinate_override","coord":"chr5,28032830,chr5,30711258"}]