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(from RefSeq NM_001928)","details":{"Gene ID":"<a href=http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;t=ENSG00000197766.7 class=w target=_blank>ENSG00000197766.7</a>","Transcript ID":"<a href=http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;t=ENST00000327726.10 class=w target=_blank>ENST00000327726.10</a>","Remark":"CAGE supported TSS","UniProt":"<a href=http://www.uniprot.org/uniprot/P00746 class=w target=_blank>P00746</a>","PubMed":"<a href=http://www.ncbi.nlm.nih.gov/pubmed/1374388 class=w target=_blank>1374388</a>","RefSeq":"<a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=Nucleotide&doptcmdl=GenBank&term=NM_001928.2 class=w target=_blank>NM_001928.2</a>, <a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=Nucleotide&doptcmdl=GenBank&term=NP_001919.2 class=w target=_blank>NP_001919.2</a>","Gene bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>","Transcript bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>"},"a1":859642,"b1":863630},{"c":"chr8","a":59119217,"b":59121346,"isgene":true,"type":"gencodeV23","name":"RP11-25K19.1","id":196962,"strand":"+","struct":{"thin":[[59119217,59119285],[59120335,59121346]]},"category":2,"desc":"RP11-25K19.1 (from geneSymbol)","details":{"Gene ID":"<a href=http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;t=ENSG00000167912.5 class=w target=_blank>ENSG00000167912.5</a>","Transcript ID":"<a href=http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;t=ENST00000518993.1 class=w target=_blank>ENST00000518993.1</a>","Gene bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>antisense</a>","Transcript bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>antisense</a>"},"a1":59119217,"b1":59121346},{"c":"chrX","a":20006712,"b":20116996,"isgene":true,"type":"refGene","name":"MAP7D2","id":49996,"strand":"-","struct":{"thin":[[20006712,20008398],[20010776,20010802],[20116879,20116996]],"thick":[[20010802,20011052],[20012348,20012535],[20013053,20013132],[20013568,20013625],[20015222,20015327],[20016093,20016325],[20024950,20025083],[20025680,20025952],[20042501,20042629],[20044363,20044524],[20050823,20050946],[20052877,20052988],[20056679,20056791],[20063413,20063577],[20064727,20064805],[20116749,20116879]]},"desc":"MAP7 domain-containing protein 2 isoform 1","a1":20006712,"b1":20116996},{"c":"chr7","a":27194363,"b":27200106,"isgene":true,"type":"gencodeV23","name":"HOXA13","id":185394,"strand":"-","struct":{"thin":[[27194363,27198197],[27200077,27200106]],"thick":[[27198197,27198442],[27199155,27200077]]},"category":1,"desc":"Homo sapiens homeobox A13 (HOXA13), mRNA. (from RefSeq NM_000522)","details":{"Gene ID":"<a href=http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;t=ENSG00000106031.7 class=w target=_blank>ENSG00000106031.7</a>","Transcript ID":"<a href=http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;t=ENST00000222753.5 class=w target=_blank>ENST00000222753.5</a>","UniProt":"<a href=http://www.uniprot.org/uniprot/P31271 class=w target=_blank>P31271</a>","PubMed":"<a href=http://www.ncbi.nlm.nih.gov/pubmed/1358459 class=w target=_blank>1358459</a><br><a href=http://www.ncbi.nlm.nih.gov/pubmed/1973146 class=w target=_blank>1973146</a>","RefSeq":"<a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=Nucleotide&doptcmdl=GenBank&term=NM_000522.4 class=w target=_blank>NM_000522.4</a>, <a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=Nucleotide&doptcmdl=GenBank&term=NP_000513.2 class=w target=_blank>NP_000513.2</a>","Gene bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>","Transcript bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>"},"a1":27194363,"b1":27200106},{"c":"chr12","a":53993809,"b":53995899,"isgene":true,"type":"gencodeV23","name":"HOXC-AS2","id":41515,"strand":"-","struct":{"thin":[[53993809,53995899]]},"category":4,"desc":"Homo sapiens HOXC cluster antisense RNA 2 (HOXC-AS2), long non-coding RNA. (from RefSeq NR_047505)","details":{"Gene ID":"<a href=http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;t=ENSG00000250133.2 class=w target=_blank>ENSG00000250133.2</a>","Transcript ID":"<a href=http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;t=ENST00000604081.1 class=w target=_blank>ENST00000604081.1</a>","Gene bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>processed_transcript</a>","Transcript bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>retained_intron</a>"},"a1":53993809,"b1":53995899},{"c":"chr7","a":27200420,"b":27206511,"isgene":true,"type":"refGene","name":"HOTTIP","id":44195,"strand":"+","struct":{"thin":[[27200420,27200521],[27200622,27201687],[27201841,27202638],[27204711,27206511]]},"desc":"","a1":27200420,"b1":27206511},{"c":"chr12","a":114408194,"b":114412832,"isgene":true,"type":"refGene","name":"TBX5-AS1","id":11599,"strand":"+","struct":{"thin":[[114408194,114408285],[114408827,114409007],[114409465,114412832]]},"desc":"","a1":114408194,"b1":114412832},{"c":"chr12","a":53990623,"b":54028922,"isgene":true,"type":"gencodeV23","name":"HOXC6","id":41513,"strand":"+","struct":{"thin":[[53990623,53990814],[54028575,54028767]],"thick":[[54028767,54028922]]},"category":1,"desc":"Homo sapiens homeobox C6 (HOXC6), transcript variant 1, mRNA. (from RefSeq NM_004503)","details":{"Gene ID":"<a href=http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;t=ENSG00000197757.7 class=w target=_blank>ENSG00000197757.7</a>","Transcript ID":"<a href=http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;t=ENST00000504315.1 class=w target=_blank>ENST00000504315.1</a>","Remark":"alternative 5' UTR","UniProt":"<a href=http://www.uniprot.org/uniprot/D6RBH4 class=w target=_blank>D6RBH4</a>","PubMed":"<a href=http://www.ncbi.nlm.nih.gov/pubmed/1358459 class=w target=_blank>1358459</a><br><a href=http://www.ncbi.nlm.nih.gov/pubmed/1973146 class=w target=_blank>1973146</a>","Gene bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>","Transcript bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>"},"a1":53990623,"b1":54028922},{"c":"chr12","a":114353929,"b":114408442,"isgene":true,"type":"refGene","name":"TBX5","id":11597,"strand":"-","struct":{"thin":[[114353929,114355531],[114403898,114403936],[114407813,114408442]],"thick":[[114355531,114356106],[114366164,114366391],[114385475,114385567],[114394740,114394893],[114398572,114398720],[114399512,114399632],[114401825,114401920],[114403751,114403898]]},"desc":"T-box transcription factor TBX5 isoform 1","a1":114353929,"b1":114408442},{"c":"chr12","a":54016851,"b":54056030,"isgene":true,"type":"refGene","name":"HOXC4","id":10652,"strand":"+","struct":{"thin":[[54016851,54017414],[54053159,54053276],[54053916,54053922],[54055205,54056030]],"thick":[[54053922,54054361],[54054849,54055205]]},"desc":"homeobox protein Hox-C4","a1":54016851,"b1":54056030},{"c":"chr12","a":53981508,"b":53984324,"isgene":true,"type":"gencodeV23","name":"HOXC-AS3","id":41503,"strand":"-","struct":{"thin":[[53981508,53984324]]},"category":4,"desc":"Homo sapiens HOXC cluster antisense RNA 3 (HOXC-AS3), long non-coding RNA. (from RefSeq NR_047506)","details":{"Gene ID":"<a href=http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;t=ENSG00000251151.2 class=w target=_blank>ENSG00000251151.2</a>","Transcript ID":"<a href=http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;t=ENST00000567780.1 class=w target=_blank>ENST00000567780.1</a>","Gene bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>processed_transcript</a>","Transcript bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>retained_intron</a>"},"a1":53981508,"b1":53984324},{"c":"chr12","a":54017109,"b":54035361,"isgene":true,"type":"gencodeV23","name":"RP11-834C11.14","id":41526,"strand":"+","struct":{"thin":[[54017109,54017414],[54034277,54035361]]},"category":2,"desc":"Homo sapiens homeobox C5, mRNA (cDNA clone IMAGE:3659936). (from mRNA BC034922)","details":{"Gene ID":"<a href=http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;t=ENSG00000273046.1 class=w target=_blank>ENSG00000273046.1</a>","Transcript ID":"<a href=http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;t=ENST00000512206.1 class=w target=_blank>ENST00000512206.1</a>","Gene bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>processed_transcript</a>","Transcript bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>processed_transcript</a>"},"a1":54017109,"b1":54035361},{"c":"chr12","a":54016851,"b":54035360,"isgene":true,"type":"refGene","name":"HOXC5","id":10651,"strand":"+","struct":{"thin":[[54016851,54017414],[54034277,54035360]]},"desc":"","a1":54016851,"b1":54035360},{"c":"chr12","a":53994894,"b":54002888,"isgene":true,"type":"gencodeV23","name":"HOXC9","id":41516,"strand":"+","struct":{"thin":[[53994894,53995016],[54002429,54002888]]},"category":2,"desc":"Homo sapiens homeobox C9 (HOXC9), mRNA. (from RefSeq NM_006897)","details":{"Gene ID":"<a href=http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;t=ENSG00000180806.4 class=w target=_blank>ENSG00000180806.4</a>","Transcript ID":"<a href=http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;t=ENST00000504557.1 class=w target=_blank>ENST00000504557.1</a>","PubMed":"<a href=http://www.ncbi.nlm.nih.gov/pubmed/1973146 class=w target=_blank>1973146</a>","Gene bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>","Transcript bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>processed_transcript</a>"},"a1":53994894,"b1":54002888},{"c":"chr12","a":54019909,"b":54022589,"isgene":true,"type":"gencodeV23","name":"AC012531.25","id":41527,"strand":"+","struct":{"thin":[[54019909,54022589]]},"category":2,"desc":"Homo sapiens cDNA clone IMAGE:5268367. (from mRNA BC041835)","details":{"Gene ID":"<a href=http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;t=ENSG00000260597.1 class=w target=_blank>ENSG00000260597.1</a>","Transcript ID":"<a href=http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;t=ENST00000562848.1 class=w target=_blank>ENST00000562848.1</a>","Gene bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>lincRNA</a>","Transcript bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>lincRNA</a>"},"a1":54019909,"b1":54022589},{"c":"chr12","a":53962307,"b":53974956,"isgene":true,"type":"refGene","name":"HOTAIR","id":10642,"strand":"-","struct":{"thin":[[53962307,53964124],[53965963,53966087],[53966275,53966377],[53967268,53967394],[53968616,53968756],[53974897,53974956]]},"desc":"","a1":53962307,"b1":53974956},{"c":"chr12","a":53985844,"b":54034888,"isgene":true,"type":"gencodeV23","name":"RP11-834C11.12","id":41509,"strand":"+","struct":{"thin":[[54034492,54034888]],"thick":[[53985844,53986010],[54034277,54034492]]},"category":1,"desc":"Nucleus (from UniProt V9GYH0)","details":{"Gene ID":"<a href=http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;t=ENSG00000273049.1 class=w target=_blank>ENSG00000273049.1</a>","Transcript ID":"<a href=http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;t=ENST00000513209.1 class=w target=_blank>ENST00000513209.1</a>","UniProt":"<a href=http://www.uniprot.org/uniprot/V9GYH0 class=w target=_blank>V9GYH0</a>","Gene bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>","Transcript bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>"},"a1":53985844,"b1":54034888},{"c":"chr12","a":53973125,"b":53977643,"isgene":true,"type":"gencodeV23","name":"HOXC11","id":41501,"strand":"+","struct":{"thin":[[53973125,53973241],[53975413,53977643]],"thick":[[53973241,53973923],[53975180,53975413]]},"category":1,"desc":"Homo sapiens homeobox C11 (HOXC11), mRNA. (from RefSeq NM_014212)","details":{"Gene ID":"<a href=http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;t=ENSG00000123388.4 class=w target=_blank>ENSG00000123388.4</a>","Transcript ID":"<a href=http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;t=ENST00000546378.1 class=w target=_blank>ENST00000546378.1</a>","UniProt":"<a href=http://www.uniprot.org/uniprot/O43248 class=w target=_blank>O43248</a>","PubMed":"<a href=http://www.ncbi.nlm.nih.gov/pubmed/1358459 class=w target=_blank>1358459</a><br><a href=http://www.ncbi.nlm.nih.gov/pubmed/1973146 class=w target=_blank>1973146</a>","RefSeq":"<a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=Nucleotide&doptcmdl=GenBank&term=NM_014212.3 class=w target=_blank>NM_014212.3</a>, <a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=Nucleotide&doptcmdl=GenBank&term=NP_055027.1 class=w target=_blank>NP_055027.1</a>","Gene bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>","Transcript bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>"},"a1":53973125,"b1":53977643},{"c":"chr12","a":53985161,"b":53990278,"isgene":true,"type":"refGene","name":"HOXC10","id":10644,"strand":"+","struct":{"thin":[[53985161,53985259],[53989446,53990278]],"thick":[[53985259,53986010],[53989168,53989446]]},"desc":"homeobox protein Hox-C10","a1":53985161,"b1":53990278}],"gss_down":2500,"gss_opt":"genebody","gss_origin":"txstart","gss_up":2500}]}]