[{"type":"bigwig","name":"7skAr1.fq.bigWig","url":"http://brc.wustl.edu/SPACE/shaopengliu/atac_v1/20190114_Yoo_ATAC_DOR/step3.2_rmbl_7skAr1.fq.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":50,"summeth":1},"metadata":{}},{"type":"bigwig","name":"7skBr1.fq.bigWig","url":"http://brc.wustl.edu/SPACE/shaopengliu/atac_v1/20190114_Yoo_ATAC_DOR/step3.2_rmbl_7skBr1.fq.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":50,"summeth":1},"metadata":{}},{"type":"bigwig","name":"ctrlAr1.fq.bigWig","url":"http://brc.wustl.edu/SPACE/shaopengliu/atac_v1/20190114_Yoo_ATAC_DOR/step3.2_rmbl_ctrlAr1.fq.bigWig","mode":1,"qtc":{"anglescale":1,"pr":232,"pg":76,"pb":56,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":50,"summeth":1},"metadata":{}},{"type":"bigwig","name":"ctrlBr1.fq.bigWig","url":"http://brc.wustl.edu/SPACE/shaopengliu/atac_v1/20190114_Yoo_ATAC_DOR/step3.2_rmbl_ctrlBr1.fq.bigWig","mode":1,"qtc":{"anglescale":1,"pr":232,"pg":76,"pb":56,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":50,"summeth":1},"metadata":{}},{"type":"bigwig","name":"fibAr1.fq.bigWig","url":"http://brc.wustl.edu/SPACE/shaopengliu/atac_v1/20190114_Yoo_ATAC_DOR/step3.2_rmbl_fibAr1.fq.bigWig","mode":1,"qtc":{"anglescale":1,"pr":49,"pg":232,"pb":64,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":50,"summeth":1},"metadata":{}},{"type":"bigwig","name":"fibBr1.fq.bigWig","url":"http://brc.wustl.edu/SPACE/shaopengliu/atac_v1/20190114_Yoo_ATAC_DOR/step3.2_rmbl_fibBr1.fq.bigWig","mode":1,"qtc":{"anglescale":1,"pr":49,"pg":232,"pb":64,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":50,"summeth":1},"metadata":{}},{"type":"bed","name":"merged_6_peak","url":"http://brc.wustl.edu/SPACE/shaopengliu/atac_v1/20190114_Yoo_ATAC_DOR/merged_sorted_peaks.narrowPeak.gz","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"metadata":{}},{"type":"native_track","list":[{"name":"refGene","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#002EB8"},"metadata":{},"details":{"source":"UCSC Genome Browser","download date":"March 7, 2014"}},{"name":"rmsk_all","mode":7,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":35,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"showscoreidx":2,"scorenamelst":["Smith-Waterman score","SW score normalized by length","1-divergence%"],"scorescalelst":[{"type":0},{"type":0},{"type":0}],"metadata":{},"categories":{"1":["SINE - short interspersed nuclear elements","#cc0000"],"2":["LINE - long interspersed nuclear element","#FF6600"],"3":["LTR - long terminal repeat element","#006600"],"4":["DNA transposon","#4A72E8"],"5":["Simple repeat, micro-satellite","#AB833B"],"6":["Satellite repeat","#660000"],"7":["Low complexity repeat","#663333"],"8":["RNA repeat","#cc33ff"],"9":["Other repeats","#488E8E"],"10":["Unknown","#5C5C5C"],"11":["Retroposon","#EA53C4"],"-1":["no information","transparent"]}}]},{"type":"metadata","vocabulary_set":{}},{"type":"run_genesetview","list":[{"c":"chr1","a":35599540,"a1":35599540,"b":35644844,"b1":35644844,"isgene":true,"name":"PSMB2","strand":"+","f3a":-1,"f3b":-1,"f5a":35641844,"f5b":35644844},{"c":"chr1","a":154206706,"a1":154206706,"b":154223797,"b1":154223797,"isgene":true,"name":"C1orf43","strand":"+","f3a":-1,"f3b":-1,"f5a":154220797,"f5b":154223797},{"c":"chr15","a":34084016,"a1":34084016,"b":34104948,"b1":34104948,"isgene":true,"name":"EMC7","strand":"+","f3a":-1,"f3b":-1,"f5a":34101948,"f5b":34104948},{"c":"chr19","a":58551565,"a1":58551565,"b":58558124,"b1":58558124,"isgene":true,"name":"CHMP2A","strand":"+","f3a":-1,"f3b":-1,"f5a":58555124,"f5b":58558124},{"c":"chr12","a":110491096,"a1":110491096,"b":110505117,"b1":110505117,"isgene":true,"name":"VPS29","strand":"+","f3a":-1,"f3b":-1,"f5a":110502117,"f5b":110505117},{"c":"chr22","a":24553008,"a1":24553008,"b":24609980,"b1":24609980,"isgene":true,"name":"SNRPD3","strand":"+","f3a":-1,"f3b":-1,"f5a":24553008,"f5b":24556008},{"c":"chrX","a":134457152,"a1":134457152,"b":134500668,"b1":134500668,"isgene":true,"name":"HPRT1","strand":"+","f3a":-1,"f3b":-1,"f5a":134457152,"f5b":134460152}],"viewrange":["PSMB2",35599654,"HPRT1",134500668]},{"type":"geneset_ripe","list":[{"name":"A set of 7 genes","lst":[{"c":"chr1","a":35599540,"b":35641844,"isgene":true,"type":"refGene","name":"PSMB2","id":1088,"strand":"-","struct":{"thin":[[35599540,35603266],[35641432,35641844]],"thick":[[35603266,35603374],[35605232,35605282],[35609245,35609408],[35631273,35631344],[35636309,35636432],[35641341,35641432]]},"desc":"proteasome subunit beta type-2 isoform 1","a1":35599540,"b1":35644844,"f3b":-1,"f3a":-1,"f5b":35644844,"f5a":35641844},{"c":"chr1","a":154206706,"b":154220797,"isgene":true,"type":"refGene","name":"C1orf43","id":2899,"strand":"-","struct":{"thin":[[154206706,154207452],[154220407,154220797]],"thick":[[154207452,154207648],[154212319,154212378],[154212457,154212624],[154213892,154213946],[154214456,154214574],[154219835,154219937],[154220341,154220407]]},"desc":"uncharacterized protein C1orf43 isoform 3","a1":154206706,"b1":154223797,"f3b":-1,"f3a":-1,"f5b":154223797,"f5a":154220797},{"c":"chr15","a":34084016,"b":34101948,"isgene":true,"type":"gencodeV23","name":"EMC7","id":60323,"strand":"-","struct":{"thin":[[34084016,34084333],[34101839,34101948]],"thick":[[34084333,34084486],[34088052,34088133],[34090316,34090455],[34095894,34096014],[34101603,34101839]]},"category":1,"desc":"Homo sapiens ER membrane protein complex subunit 7 (EMC7), mRNA. (from RefSeq NM_020154)","details":{"Gene ID":"<a href=http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;t=ENSG00000134153.9 class=w target=_blank>ENSG00000134153.9</a>","Transcript ID":"<a href=http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;t=ENST00000256545.8 class=w target=_blank>ENST00000256545.8</a>","UniProt":"<a href=http://www.uniprot.org/uniprot/Q9NPA0 class=w target=_blank>Q9NPA0</a>","PubMed":"<a href=http://www.ncbi.nlm.nih.gov/pubmed/10873569 class=w target=_blank>10873569</a><br><a href=http://www.ncbi.nlm.nih.gov/pubmed/22119785 class=w target=_blank>22119785</a>","RefSeq":"<a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=Nucleotide&doptcmdl=GenBank&term=NM_020154.2 class=w target=_blank>NM_020154.2</a>, <a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=Nucleotide&doptcmdl=GenBank&term=NP_064539.1 class=w target=_blank>NP_064539.1</a>","Gene bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>","Transcript bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>"},"a1":34084016,"b1":34104948,"f3b":-1,"f3a":-1,"f5b":34104948,"f5a":34101948},{"c":"chr19","a":58551565,"b":58555124,"isgene":true,"type":"refGene","name":"CHMP2A","id":24764,"strand":"-","struct":{"thin":[[58551565,58551648],[58554212,58554236],[58554987,58555124]],"thick":[[58551648,58551776],[58551905,58551967],[58552054,58552185],[58552258,58552438],[58554044,58554212]]},"desc":"charged multivesicular body protein 2a","a1":58551565,"b1":58558124,"f3b":-1,"f3a":-1,"f5b":58558124,"f5a":58555124},{"c":"chr12","a":110491096,"b":110502117,"isgene":true,"type":"gencodeV23","name":"VPS29","id":45718,"strand":"-","struct":{"thin":[[110491096,110492004],[110502051,110502117]],"thick":[[110492004,110492122],[110492995,110493231],[110496011,110496203],[110502048,110502051]]},"category":1,"desc":"Homo sapiens vacuolar protein sorting 29 homolog (S. cerevisiae) (VPS29), transcript variant 1, mRNA. (from RefSeq NM_016226)","details":{"Gene ID":"<a href=http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;t=ENSG00000111237.18 class=w target=_blank>ENSG00000111237.18</a>","Transcript ID":"<a href=http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;t=ENST00000549578.5 class=w target=_blank>ENST00000549578.5</a>","UniProt":"<a href=http://www.uniprot.org/uniprot/Q9UBQ0 class=w target=_blank>Q9UBQ0</a>","PubMed":"<a href=http://www.ncbi.nlm.nih.gov/pubmed/11062004 class=w target=_blank>11062004</a>","RefSeq":"<a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=Nucleotide&doptcmdl=GenBank&term=NM_016226.4 class=w target=_blank>NM_016226.4</a>, <a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=Nucleotide&doptcmdl=GenBank&term=NP_057310.1 class=w target=_blank>NP_057310.1</a>","Gene bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>","Transcript bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>"},"a1":110491096,"b1":110505117,"f3b":-1,"f3a":-1,"f5b":110505117,"f5a":110502117},{"c":"chr22","a":24556008,"b":24609980,"isgene":true,"type":"gencodeV23","name":"SNRPD3","id":132923,"strand":"+","struct":{"thin":[[24556008,24556071],[24557656,24557674],[24571977,24572017],[24583681,24583808],[24607953,24608023],[24609964,24609980]],"thick":[[24557674,24557800],[24567983,24568176],[24571915,24571977]]},"category":1,"desc":"The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt H3BT13)","details":{"Gene ID":"<a href=http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;t=ENSG00000100028.11 class=w target=_blank>ENSG00000100028.11</a>","Transcript ID":"<a href=http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;t=ENST00000404603.5 class=w target=_blank>ENST00000404603.5</a>","UniProt":"<a href=http://www.uniprot.org/uniprot/P62318 class=w target=_blank>P62318</a>","PubMed":"<a href=http://www.ncbi.nlm.nih.gov/pubmed/7527560 class=w target=_blank>7527560</a><br><a href=http://www.ncbi.nlm.nih.gov/pubmed/1701240 class=w target=_blank>1701240</a>","Gene bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>","Transcript bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>nonsense_mediated_decay</a>"},"a1":24553008,"b1":24609980,"f3b":-1,"f3a":-1,"f5b":24556008,"f5a":24553008},{"c":"chrX","a":134460152,"b":134500668,"strand":"+","type":"gencodeV23","name":"HPRT1","desc":"Homo sapiens hypoxanthine phosphoribosyltransferase 1 (HPRT1), mRNA. (from RefSeq NM_000194)","isgene":true,"a1":134457152,"b1":134500668,"f3b":-1,"f3a":-1,"f5b":134460152,"f5a":134457152}],"gss_down":5000,"gss_opt":"genebodypromoter","gss_origin":"genebody","gss_up":5000}]}]