[{"type":"bigwig","name":"STAR_AN_EVT_c3.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_AN_EVT_c3.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"#ECFFC7"},"metadata":{}},{"type":"bigwig","name":"STAR_H9_EVT_c3.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_H9_EVT_c3.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"#ECFFC7"},"metadata":{}},{"type":"bigwig","name":"STAR_AN_naive_c4.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_AN_naive_c4.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"#E8FDFF"},"metadata":{}},{"type":"bigwig","name":"STAR_H9_naive_c4.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_H9_naive_c4.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"#E8FDFF"},"metadata":{}},{"type":"bigwig","name":"STAR_AN_naive_TSC_c5.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_AN_naive_TSC_c5.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"#FFE4D9"},"metadata":{}},{"type":"bigwig","name":"STAR_H9_naive_TSC_c5.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_H9_naive_TSC_c5.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"#FFE4D9"},"metadata":{}},{"type":"bigwig","name":"STAR_H9_c1.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_H9_c1.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"#FFE4D9"},"metadata":{}},{"type":"bigwig","name":"STAR_AN_c1.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_AN_c1.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"#FFE4D9"},"metadata":{}},{"type":"bigwig","name":"STAR_AN_primed_c6.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_AN_primed_c6.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"#E3FFEE"},"metadata":{}},{"type":"bigwig","name":"STAR_H9_primed_c6.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_H9_primed_c6.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"#E3FFEE"},"metadata":{}},{"type":"bigwig","name":"STAR_AN_primed_TSC_c8.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_AN_primed_TSC_c8.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"#FFEBF0"},"metadata":{}},{"type":"bigwig","name":"STAR_H9_primed_TSC_c8.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_H9_primed_TSC_c8.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"#FFEBF0"},"metadata":{}},{"type":"bigwig","name":"naive_vs_TSC_plus","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk/4_5_region_plus.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":1,"thmin":-100,"thmax":100,"thpercentile":90,"height":25,"summeth":1},"metadata":{}},{"type":"bigwig","name":"naive_vs_TSC_minus","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk/4_5_region_minus.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":1,"thmin":-100,"thmax":100,"thpercentile":90,"height":25,"summeth":1},"metadata":{}},{"type":"bigwig","name":"prime_vs_primeTSC_plus","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk/6_8_region_plus.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":1,"thmin":-100,"thmax":100,"thpercentile":90,"height":25,"summeth":1,"bg":"#FDFFC4"},"metadata":{}},{"type":"bigwig","name":"prime_vs_primeTSC_minus","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk/6_8_region_minus.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":1,"thmin":-100,"thmax":100,"thpercentile":90,"height":25,"summeth":1,"bg":"#FDFFC4"},"metadata":{}},{"type":"bigwig","name":"STAR_BT5_rep1_c10.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_BT5_rep1_c10.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"#E6E1EB"},"metadata":{}},{"type":"bigwig","name":"STAR_BT5_rep2_c10.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_BT5_rep2_c10.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"#E6E1EB"},"metadata":{}},{"type":"bigwig","name":"STAR_AN_STB_c9.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_AN_STB_c9.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"#FDFFCF"},"metadata":{}},{"type":"bigwig","name":"STAR_H9_STB_c9.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_H9_STB_c9.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"#FDFFCF"},"metadata":{}},{"type":"bigwig","name":"STAR_H9_capacitated_rep1_c2.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_H9_capacitated_rep1_c2.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1},"metadata":{}},{"type":"bigwig","name":"STAR_H9_capacitated_rep2_c2.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_H9_capacitated_rep2_c2.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1},"metadata":{}},{"type":"bigwig","name":"STAR_H9_primed_StemPro_c7.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_H9_primed_StemPro_c7.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1},"metadata":{}},{"type":"bigwig","name":"STAR_WIBR3_naive_TSC_c11.10M_norm.bigWig","url":"http://regmedsrv1.wustl.edu/Public_SPACE/shuhua/Public_html/snRNA_study/firstexon_study/AFME_elife_bulk//STAR_WIBR3_naive_TSC_c11.10M_norm.bigWig","mode":1,"qtc":{"anglescale":1,"pr":60,"pg":103,"pb":232,"nr":255,"ng":0,"nb":0,"pth":"rgb(42,72,162)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1},"metadata":{}},{"type":"native_track","list":[{"name":"gencodeV23","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"metadata":{},"categories":{"1":["coding","rgb(0,60,179)"],"2":["non-coding","rgb(0,128,0)"],"3":["pseudogene","rgb(230,0,172)"],"4":["problem","rgb(255,0,0)"],"5":["polyA","rgb(0,0,51)"],"-1":["no information","transparent"]}},{"name":"rmsk_all","mode":7,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":35,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"showscoreidx":2,"scorenamelst":["Smith-Waterman score","SW score normalized by length","1-divergence%"],"scorescalelst":[{"type":0},{"type":0},{"type":0}],"metadata":{},"categories":{"1":["SINE - short interspersed nuclear elements","#cc0000"],"2":["LINE - long interspersed nuclear element","#FF6600"],"3":["LTR - long terminal repeat element","#006600"],"4":["DNA transposon","#4A72E8"],"5":["Simple repeat, micro-satellite","#AB833B"],"6":["Satellite repeat","#660000"],"7":["Low complexity repeat","#663333"],"8":["RNA repeat","#cc33ff"],"9":["Other repeats","#488E8E"],"10":["Unknown","#5C5C5C"],"11":["Retroposon","#EA53C4"],"-1":["no information","transparent"]}}]},{"type":"metadata","vocabulary_set":{}},{"type":"coordinate_override","coord":"chr15,43592781,chr15,43595294"}]