[{"type":"bigwig","name":"alphapeaks_new","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/konnie/ATAC/ATAC_allalpha_merge.bw","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":1,"thmin":0,"thmax":1000,"thpercentile":90,"height":45,"summeth":1},"metadata":{}},{"type":"bigwig","name":"betapeaks_new","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/konnie/ATAC/ATAC_allbeta_merged.bw","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":1,"thmin":0,"thmax":1000,"thpercentile":90,"height":45,"summeth":1},"metadata":{}},{"type":"bigwig","name":"deltapeaks_new","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/konnie/ATAC/ATAC_alldelta_merged.bw","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":1,"thmin":0,"thmax":1000,"thpercentile":90,"height":45,"summeth":1},"metadata":{}},{"type":"bigwig","name":"acinarpeaks_new","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/konnie/ATAC/ATAC_allacinar_merged.bw","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":1,"thmin":0,"thmax":1000,"thpercentile":90,"height":45,"summeth":1},"metadata":{}},{"type":"bigwig","name":"ductpeaks_new","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/konnie/ATAC/ATAC_allduct_merged.bw","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":1,"thmin":0,"thmax":1000,"thpercentile":90,"height":45,"summeth":1},"metadata":{}},{"type":"bed","name":"DORs_arda2018","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/konnie/ATAC/DORs_arda2018_sorted.bed.gz","mode":6,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"metadata":{}},{"type":"bed","name":"newDOR_k10","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/konnie/ATAC/newATAC_DORall_k10_sorted.bed.gz","mode":6,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666","logtype":1},"metadata":{}},{"type":"interaction","name":"alpha_m_all","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/hichipper/alpha_m.interactions.scorePET.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":125,"ncolorscore":0,"pfilterscore":30,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"beta_m_all","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/hichipper/beta_m.interactions.scorePET.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":128,"ncolorscore":0,"pfilterscore":30,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"delta_m_all","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/hichipper/delta_m.interactions.scorePET.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":37,"ncolorscore":0,"pfilterscore":30,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"beta_m_all_FH0.05","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/fithichip/beta_m_L.interactions_FitHiC_Q0.05_WashU.bed.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":3,"pg":3,"pb":255,"nr":0,"ng":99,"nb":133,"pcolorscore":23.7274,"ncolorscore":0,"pfilterscore":4,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"alpha_m_all_FH0.05","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/fithichip/alpha_m_L.interactions_FitHiC_Q0.05_WashU.bed.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":3,"pg":3,"pb":255,"nr":0,"ng":99,"nb":133,"pcolorscore":34.3302,"ncolorscore":0,"pfilterscore":4,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"acinar_m_all","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/hichipper/acinar_m.interactions.scorePET.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":250,"ncolorscore":0,"pfilterscore":30,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"duct_m_all","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/hichipper/duct_m.interactions.scorePET.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":188,"ncolorscore":0,"pfilterscore":30,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"acinar_m_all_FH0.05","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/fithichip/acinar_m_L.interactions_FitHiC_Q0.05_WashU.bed.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":3,"pg":3,"pb":255,"nr":0,"ng":99,"nb":133,"pcolorscore":14.7667,"ncolorscore":0,"pfilterscore":4,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"duct_m_all_FH0.05","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/fithichip/duct_m_L.interactions_FitHiC_Q0.05_WashU.bed.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":3,"pg":3,"pb":255,"nr":0,"ng":99,"nb":133,"pcolorscore":22.3164,"ncolorscore":0,"pfilterscore":4,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"delta_m_all_FH0.05","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/fithichip/delta_m_L.interactions_FitHiC_Q0.05_WashU.bed.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":3,"pg":3,"pb":255,"nr":0,"ng":99,"nb":133,"pcolorscore":4.94941,"ncolorscore":0,"pfilterscore":4,"nfilterscore":0,"height":50},"metadata":{}},{"type":"native_track","list":[{"name":"refGene","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#002EB8"},"metadata":{},"details":{"source":"UCSC Genome Browser","download date":"Jan 1, 2012"}},{"name":"rmsk_all","mode":7,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":35,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"showscoreidx":2,"scorenamelst":["Smith-Waterman score","SW score normalized by length","1-divergence%"],"scorescalelst":[{"type":0},{"type":0},{"type":0}],"metadata":{},"categories":{"1":["SINE - short interspersed nuclear elements","#cc0000"],"2":["LINE - long interspersed nuclear element","#FF6600"],"3":["LTR - long terminal repeat element","#006600"],"4":["DNA transposon","#4A72E8"],"5":["Simple repeat, micro-satellite","#AB833B"],"6":["Satellite repeat","#660000"],"7":["Low complexity repeat","#663333"],"8":["RNA repeat","#cc33ff"],"9":["Other repeats","#488E8E"],"10":["Unknown","#5C5C5C"],"-1":["no information","transparent"]}}]},{"type":"bigwig","name":"HiCh_25_alpha_bw","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/JAW/Li_data/sort_HiCh_25_alpha_hg19.bwt2pairs_interaction.bw","mode":"hide","qtc":{"thtype":0},"metadata":{}},{"type":"bed","name":"oldDOR_JAW","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/JAW/DORall.bed.gz","mode":"hide","qtc":{},"metadata":{}},{"type":"bed","name":"newDOR_k8","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/konnie/ATAC/newATAC_DORall_k8_sorted.bed.gz","mode":"hide","qtc":{},"metadata":{}},{"type":"interaction","name":"acinar_HiCh_22","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/hichipper/HiCh_22_acinar.interaction.txt.gz","mode":"hide","qtc":{},"metadata":{}},{"type":"interaction","name":"duct_HiCh_21","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/hichipper/HiCh_21_duct.interactions.scorePET.txt.gz","mode":"hide","qtc":{},"metadata":{}},{"type":"interaction","name":"alpha_HiCh_25","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/hichipper/HiCh_25_alpha.interactions.scorePET.txt.gz","mode":"hide","qtc":{},"metadata":{}},{"type":"interaction","name":"beta_HiCh_24","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/hichipper/HiCh_24_beta.interactions.scorePET.txt.gz","mode":"hide","qtc":{},"metadata":{}},{"type":"interaction","name":"delta_HiCh_27","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/hichipper/HiCh_27_delta.interaction.txt.gz","mode":"hide","qtc":{},"metadata":{}},{"type":"interaction","name":"acinar_22_FH0.05","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/fithichip/HiCh_22_acinar_L.interactions_FitHiC_Q0.05_WashU.bed.gz","mode":"hide","qtc":{},"metadata":{}},{"type":"interaction","name":"duct_21_FH0.05","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/fithichip/HiCh_21_duct_L.interactions_FitHiC_Q0.05_WashU.bed.gz","mode":"hide","qtc":{},"metadata":{}},{"type":"interaction","name":"alpha_25_FH0.05","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/fithichip/HiCh_25_alpha_L.interactions_FitHiC_Q0.05_WashU.bed.gz","mode":"hide","qtc":{},"metadata":{}},{"type":"interaction","name":"beta_24_FH0.05","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/fithichip/HiCh_24_beta_L.interactions_FitHiC_Q0.05_WashU.bed.gz","mode":"hide","qtc":{},"metadata":{}},{"type":"interaction","name":"delta_27_FH0.05","url":"https://hpc.nih.gov/~Arda_Lab_LRBGE/HiChIP/Li/AllMerge_vs_Single/fithichip/HiCh_27_delta_L.interactions_FitHiC_Q0.05_WashU.bed.gz","mode":"hide","qtc":{},"metadata":{}},{"type":"metadata","vocabulary_set":{}},{"type":"coordinate_override","coord":"chr20,16608481,chr20,17638981"}]