[{"type":"BED","name":"viewpoints.bed","url":"http://epigenomegateway.wustl.edu/browser/t/1562462379.txt.gz","mode":3,"qtc":{"anglescale":1,"pr":0,"pg":77,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"}},{"type":"interaction","name":"SOX9_TSS_correlations.interact_datatxt","url":"http://epigenomegateway.wustl.edu/browser/t/1576184050.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":0,"pg":128,"pb":0,"nr":106,"ng":90,"nb":205,"pcolorscore":0.918181818181818,"ncolorscore":-0.627272727272727,"pfilterscore":0,"nfilterscore":0,"height":50}},{"type":"bigWig","name":"H3K27Ac M011","url":"http://ucsctracks.aertslab.org/users/dsvet/ChIP_H3K27ac_MM011.nofirst5bp.minMQ4.sorted.to200bp.bw","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":225,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":1,"thmin":0,"thmax":40,"thpercentile":95,"height":70,"summeth":2,"smooth":5,"bg":"rgb(255,255,255)"}},{"type":"interaction","name":"4C_MM047_peak1.minMQ4.sorted.EB.txt","url":"http://epigenomegateway.wustl.edu/browser/t/96912259.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":1,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":255,"pg":0,"pb":0,"nr":0,"ng":99,"nb":133,"pcolorscore":0,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50}},{"type":"interaction","name":"4C_MM011_peak1_sox9_2.minMQ4.sorted.EB.txt","url":"http://epigenomegateway.wustl.edu/browser/t/445879089.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":1,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":255,"pg":0,"pb":255,"nr":0,"ng":128,"nb":128,"pcolorscore":0,"ncolorscore":-1,"pfilterscore":0,"nfilterscore":0,"height":50,"bg":null}},{"type":"bigWig","name":"H3K27Ac M047","url":"http://ucsctracks.aertslab.org/users/dsvet/ChIP_H3K27ac_MM047.nofirst5bp.minMQ4.sorted.to200bp.bw","mode":1,"qtc":{"anglescale":1,"pr":211,"pg":19,"pb":57,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":1,"thmin":0,"thmax":40,"thpercentile":95,"height":80,"summeth":2,"smooth":5,"bg":"rgb(255,255,255)"}},{"type":"interaction","name":"4C_MM047_sox9_2.minMQ4.sorted.EB.txt","url":"http://epigenomegateway.wustl.edu/browser/t/2098992879.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":255,"pg":0,"pb":0,"nr":0,"ng":99,"nb":133,"pcolorscore":3886.79782031145,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50,"bg":"rgb(255,255,255)"}},{"type":"interaction","name":"4C_MM047_peak1_sox9_2.minMQ4.sorted.EB.txt","url":"http://epigenomegateway.wustl.edu/browser/t/865571999.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":1,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":255,"pg":0,"pb":255,"nr":0,"ng":128,"nb":128,"pcolorscore":0,"ncolorscore":-1,"pfilterscore":0,"nfilterscore":0,"height":50,"bg":null}},{"type":"interaction","name":"4C_MM011_sox9_2.minMQ4.sorted.EB.txt","url":"http://epigenomegateway.wustl.edu/browser/t/713184309.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":0,"pg":0,"pb":255,"nr":0,"ng":99,"nb":133,"pcolorscore":4314.8896149373,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50}},{"type":"interaction","name":"4C_MM011_peak1.minMQ4.sorted.EB.txt","url":"http://epigenomegateway.wustl.edu/browser/t/851233214.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":1,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":0,"pg":0,"pb":214,"nr":0,"ng":99,"nb":133,"pcolorscore":0,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50,"bg":null}},{"type":"bigWig","name":"Stam SK-N-SH RA CTCF","url":"http://egg.wustl.edu/d/hg19/GSM749667_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14009","24001","30004"],"details":{"cell":"SK-N-SH_RA","cell organism":"Human","cell description":"neuroblastoma cell line, treatment: differentiated with retinoic acid. (Biedler, et al. Morphology and Growth, Tumorigenicity, and Cytogenetics of Human Neuroblastoma Cells in Continuous Culture. Cancer Research 33, 2643-2652, November 1973.)","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749667_hg19_wgEncodeUwTfbsSknshraCtcfStdRawRep2.bigWig"},"geolst":["GSM749667"]},{"type":"bigWig","name":"Stam HMF CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749665_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13084","24001","30004"],"details":{"cell":"HMF","cell organism":"Human","cell description":"human mammary fibroblasts","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749665_hg19_wgEncodeUwTfbsHmfCtcfStdRawRep1.bigWig"},"geolst":["GSM749665"]},{"type":"bigWig","name":"UW ChipSeq HCM CTCFRep2","url":"http://egg.wustl.edu/d/hg19/GSM1022677_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13081","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"HCM","cell organism":"human","cell description":"cardiac myocytes","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000946","labexpid":"DS18567","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"2","original_filename":"GSM1022677_hg19_wgEncodeUwTfbsHcmCtcfStdRawRep2.bigWig"},"geolst":["GSM1022677"]},{"type":"bigWig","name":"Stam GM12878 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749704_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13047","24001","30004"],"details":{"cell":"GM12878","cell organism":"Human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749704_hg19_wgEncodeUwTfbsGm12878CtcfStdRawRep1.bigWig"},"geolst":["GSM749704"]},{"type":"bigWig","name":"UT-A ChipSeq Pancreas OC","url":"http://egg.wustl.edu/d/hg19/GSM1006881_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13227","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003454","labversion":"baseAlignCounts.pl v 1","replicate":"1","antibody":"CTCF","original_filename":"GSM1006881_hg19_wgEncodeOpenChromChipPancreasocCtcfBaseOverlapSignalRep1.bigWig"},"geolst":["GSM1006881"]},{"type":"bigWig","name":"Stam GM06990 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749708_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13076","24001","30004"],"details":{"cell":"GM06990","cell organism":"Human","cell description":"Lymphoblastoid, International HapMap Project, CEPH/Utah, Treatment: Epstein-Barr Virus transformed","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749708_hg19_wgEncodeUwTfbsGm06990CtcfStdRawRep1.bigWig"},"geolst":["GSM749708"]},{"type":"bigWig","name":"Stam GM12865 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749740_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13094","24001","30004"],"details":{"cell":"GM12865","cell organism":"Human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749740_hg19_wgEncodeUwTfbsGm12865CtcfStdRawRep1.bigWig"},"geolst":["GSM749740"]},{"type":"bigWig","name":"UT-A ChipSeq GM13977 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1006869_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14046","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003444","labversion":"baseAlignCounts.pl v 1","replicate":"1","cell sex":"F","antibody":"CTCF","original_filename":"GSM1006869_hg19_wgEncodeOpenChromChipGm13977CtcfBaseOverlapSignalRep1.bigWig"},"geolst":["GSM1006869"]},{"type":"bigWig","name":"Stam NHEK CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749707_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13056","24001","30004"],"details":{"cell":"NHEK","cell organism":"Human","cell description":"epidermal keratinocytes","cell karyotype":"normal","cell lineage":"ectoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749707_hg19_wgEncodeUwTfbsNhekCtcfStdRawRep1.bigWig"},"geolst":["GSM749707"]},{"type":"bigWig","name":"UT-A ChipSeq Medullo CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1006893_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14020","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003441","labversion":"baseAlignCounts.pl v 1","replicate":"1,2","cell sex":"U","antibody":"CTCF","original_filename":"GSM1006893_hg19_wgEncodeOpenChromChipMedulloCtcfBaseOverlapSignal.bigWig"},"geolst":["GSM1006893"]},{"type":"bigWig","name":"UT-A ChipSeq Gliobla CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822303_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14048","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"Gliobla","cell organism":"human","cell description":"glioblastoma, these cells (aka H54 and D54) come from a surgical resection from a patient with glioblastoma multiforme (WHO Grade IV). D54 is a commonly studied glioblastoma cell line (Bao et al., 2006) that has been thoroughly described by S Bigner (1981). (PMID: 7252524)","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"Gliobla/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822303_hg19_wgEncodeOpenChromChipGlioblaCtcfSig.bigWig"},"geolst":["GSM822303"]},{"type":"bigWig","name":"UT-A ChipSeq Gliobla CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822303_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14048","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"Gliobla","cell organism":"human","cell description":"glioblastoma, these cells (aka H54 and D54) come from a surgical resection from a patient with glioblastoma multiforme (WHO Grade IV). D54 is a commonly studied glioblastoma cell line (Bao et al., 2006) that has been thoroughly described by S Bigner (1981). (PMID: 7252524)","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"Gliobla/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822303_hg19_wgEncodeOpenChromChipGlioblaCtcfBaseOverlapSignal.bigWig"},"geolst":["GSM822303"]},{"type":"bigWig","name":"UT-A ChipSeq MCF-7 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822305_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14028","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"MCF-7","cell organism":"human","cell description":"mammary gland, adenocarcinoma. (PMID: 4357757)","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"MCF-7/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822305_hg19_wgEncodeOpenChromChipMcf7CtcfBaseOverlapSignal.bigWig"},"geolst":["GSM822305"]},{"type":"bigWig","name":"UT-A ChipSeq MCF-7 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822305_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14028","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"MCF-7","cell organism":"human","cell description":"mammary gland, adenocarcinoma. (PMID: 4357757)","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"MCF-7/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822305_hg19_wgEncodeOpenChromChipMcf7CtcfSig.bigWig"},"geolst":["GSM822305"]},{"type":"bigWig","name":"UW ChipSeq A549 CTCFRep2","url":"http://egg.wustl.edu/d/hg19/GSM1022639_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14011","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"A549","cell organism":"human","cell description":"epithelial cell line derived from a lung carcinoma tissue. (PMID: 175022), This line was initiated in 1972 by D.J. Giard, et al. through explant culture of lung carcinomatous tissue from a 58-year-old caucasian male. - ATCC, newly promoted to tier 2: not in 2011 analysis","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH001904","labexpid":"DS18302","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"2","original_filename":"GSM1022639_hg19_wgEncodeUwTfbsA549CtcfStdRawRep2.bigWig"},"geolst":["GSM1022639"]},{"type":"bigWig","name":"Stam HUVEC CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749674_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13052","24001","30004"],"details":{"cell":"HUVEC","cell organism":"Human","cell description":"umbilical vein endothelial cells","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749674_hg19_wgEncodeUwTfbsHuvecCtcfStdRawRep1.bigWig"},"geolst":["GSM749674"]},{"type":"bigWig","name":"Stam GM12864 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749676_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13093","24001","30004"],"details":{"cell":"GM12864","cell organism":"Human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749676_hg19_wgEncodeUwTfbsGm12864CtcfStdRawRep1.bigWig"},"geolst":["GSM749676"]},{"type":"bigWig","name":"Stanford ChipSeq GM12878 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM935611_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13047","24001","30018"],"details":{"lab":"Stanford","lab description":"Snyder - Stanford University","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12878","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"CTCF_(SC-15914)","antibody antibodydescription":"Goat polyclonal, epitope mapping near the C-terminus of CTCF of human origin. Antibody Target: CTCF","antibody targetdescription":"Transcriptional regulator with 11 highly conserved zinc finger domains. Depending on context, can bind a histone acetyltransferase (HAT)-containing complex and function as transcriptional activator or bind a histone deacetylase (HDAC)-containing complex and function as transcriptional repressor. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation. Can dimerize, mediating long-range chromatin looping. When bound to chromatin, provides an anchor point for nucleosomes positioning. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites.","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-15914","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000625","replicate":"1","original_filename":"GSM935611_hg19_wgEncodeSydhTfbsGm12878Ctcfsc15914c20StdSig.bigWig"},"geolst":["GSM935611"]},{"type":"bigWig","name":"Bernstein NHEK CTCF","url":"http://egg.wustl.edu/d/hg19/GSM733636_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13056","24001","30003"],"details":{"cell":"NHEK","cell organism":"Human","cell description":"Normal Human Epidermal Keratinocytes","cell karyotype":"normal","cell lineage":"ectoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","original_filename":"GSM733636_hg19_wgEncodeBroadHistoneNhekCtcfStdSig.bigWig"},"geolst":["GSM733636"]},{"type":"bigWig","name":"UT-A ChipSeq LNCaP CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1006874_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14012","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003452","labversion":"baseAlignCounts.pl v 1","replicate":"1","cell sex":"M","antibody":"CTCF","original_filename":"GSM1006874_hg19_wgEncodeOpenChromChipLncapCtcfBaseOverlapSignalRep1.bigWig"},"geolst":["GSM1006874"]},{"type":"bigWig","name":"UT-A ChipSeq Spleen OC","url":"http://egg.wustl.edu/d/hg19/GSM1006883_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13234","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003455","labversion":"baseAlignCounts.pl v 1","replicate":"1","antibody":"CTCF","original_filename":"GSM1006883_hg19_wgEncodeOpenChromChipSpleenocCtcfBaseOverlapSignalRep1.bigWig"},"geolst":["GSM1006883"]},{"type":"bigWig","name":"UT-A ChipSeq GM13976 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1006885_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13278","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003443","labversion":"baseAlignCounts.pl v 1","replicate":"1","cell sex":"F","antibody":"CTCF","original_filename":"GSM1006885_hg19_wgEncodeOpenChromChipGm13976CtcfBaseOverlapSignalRep1.bigWig"},"geolst":["GSM1006885"]},{"type":"bigWig","name":"UT-A ChipSeq GM13976 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1006885_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13278","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003443","labversion":"baseAlignCounts.pl v 1","replicate":"1","cell sex":"F","antibody":"CTCF","original_filename":"GSM1006885_hg19_wgEncodeOpenChromChipGm13976CtcfSigRep1.bigWig"},"geolst":["GSM1006885"]},{"type":"bigWig","name":"UT-A ChipSeq LNCaP androgen","url":"http://egg.wustl.edu/d/hg19/GSM1006887_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14012","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003452","labversion":"baseAlignCounts.pl v 1","replicate":"1","cell sex":"M","treatment":"androgen","treatment description":"12 hrs with 1 nM Methyltrienolone (R1881) (Crawford)","antibody":"CTCF","original_filename":"GSM1006887_hg19_wgEncodeOpenChromChipLncapCtcfAndroSigRep1.bigWig"},"geolst":["GSM1006887"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq H1-hESC CTCF","url":"http://egg.wustl.edu/d/hg19/GSM803419_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["11101","24001","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"H1-hESC","cell organism":"human","cell description":"embryonic stem cells","cell karyotype":"normal","cell lineage":"inner cell mass","cell sex":"M","antibody":"CTCF_(SC-5916)","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin.","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-5916","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v041610.2","protocol description":"2x10^7 cells, fragmentation by probe-in sonicator, one 15-cycle round of PCR (Myers)","controlid":"SL1398","labexpid":"SL2688","replicate":"1","replicate description":"tier 1","original_filename":"GSM803419_hg19_wgEncodeHaibTfbsH1hescCtcfsc5916V0416102RawRep1.bigWig"},"geolst":["GSM803419"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq H1-hESC CTCF","url":"http://egg.wustl.edu/d/hg19/GSM803419_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["11101","24001","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"H1-hESC","cell organism":"human","cell description":"embryonic stem cells","cell karyotype":"normal","cell lineage":"inner cell mass","cell sex":"M","antibody":"CTCF_(SC-5916)","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin.","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-5916","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v041610.2","protocol description":"2x10^7 cells, fragmentation by probe-in sonicator, one 15-cycle round of PCR (Myers)","controlid":"SL1398","labexpid":"SL2688","replicate":"1","replicate description":"tier 1","original_filename":"GSM803419_hg19_wgEncodeHaibTfbsH1hescCtcfsc5916V0416102RawRep2.bigWig"},"geolst":["GSM803419"]},{"type":"bigWig","name":"UT-A ChipSeq GM19238 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822278_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13065","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM19238","cell organism":"human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, Yoruba in Ibadan, Nigera, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"generic_female","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822278_hg19_wgEncodeOpenChromChipGm19238CtcfBaseOverlapSignal.bigWig"},"geolst":["GSM822278"]},{"type":"bigWig","name":"Stam WERI-Rb-1 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749679_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14010","24001","30004"],"details":{"cell":"WERI-Rb-1","cell organism":"Human","cell description":"retinoblastoma (PMID: 844036)","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749679_hg19_wgEncodeUwTfbsWerirb1CtcfStdRawRep2.bigWig"},"geolst":["GSM749679"]},{"type":"bigWig","name":"Stanford ChipSeq SK-N-SH CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1003633_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14016","24001","30018"],"details":{"lab":"Stanford","lab description":"Snyder - Stanford University","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"SK-N-SH","cell organism":"human","cell description":"neuroblastoma, newly promoted to tier 2: not in 2011 analysis, the SK-N-SH line was established from a neuroblastoma in a 4 year old individual.","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"CTCF_(SC-15914)","antibody antibodydescription":"Goat polyclonal, epitope mapping near the C-terminus of CTCF of human origin. Antibody Target: CTCF","antibody targetdescription":"Transcriptional regulator with 11 highly conserved zinc finger domains. Depending on context, can bind a histone acetyltransferase (HAT)-containing complex and function as transcriptional activator or bind a histone deacetylase (HDAC)-containing complex and function as transcriptional repressor. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation. Can dimerize, mediating long-range chromatin looping. When bound to chromatin, provides an anchor point for nucleosomes positioning. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites.","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-15914","control":"IgG-rab","control description":"Input signal from Normal Rabbit IgG ChIP-seq.","controlid":"wgEncodeEH003393","original_filename":"GSM1003633_hg19_wgEncodeSydhTfbsSknshCtcfbIggrabSig.bigWig"},"geolst":["GSM1003633"]},{"type":"bigWig","name":"Broad ChipSeq Dnd41 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1003464_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14044","24001","30003"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"Dnd41/Input/std","replicate":"1,2","softwareversion":"ScriptureVPaperR3","cell sex":"M","antibody":"CTCF","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","original_filename":"GSM1003464_hg19_wgEncodeBroadHistoneDnd41CtcfSig.bigWig"},"geolst":["GSM1003464"]},{"type":"bigWig","name":"Stam HRPEpiC CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749673_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13088","24001","30004"],"details":{"cell":"HRPEpiC","cell organism":"Human","cell description":"Human Retinal Pigment Epithelial Cells","cell lineage":"ectoderm","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749673_hg19_wgEncodeUwTfbsHrpeCtcfStdRawRep1.bigWig"},"geolst":["GSM749673"]},{"type":"bigWig","name":"UW ChipSeq RPTEC CTCFRep1","url":"http://egg.wustl.edu/d/hg19/GSM1022667_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13113","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"RPTEC","cell organism":"human","cell description":"renal proximal tubule epithelial cells","cell karyotype":"normal","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH002045","labexpid":"DS18338","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"1","original_filename":"GSM1022667_hg19_wgEncodeUwTfbsRptecCtcfStdRawRep1.bigWig"},"geolst":["GSM1022667"]},{"type":"bigWig","name":"UW ChipSeq HMEC CTCFRep2","url":"http://egg.wustl.edu/d/hg19/GSM1022631_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13049","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"HMEC","cell organism":"human","cell description":"mammary epithelial cells","cell karyotype":"normal","cell lineage":"ectoderm","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000466","labexpid":"DS18569","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"2","original_filename":"GSM1022631_hg19_wgEncodeUwTfbsHmecCtcfStdRawRep2.bigWig"},"geolst":["GSM1022631"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq A549 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM803456_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14011","24001","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"A549","cell organism":"human","cell description":"epithelial cell line derived from a lung carcinoma tissue. (PMID: 175022), This line was initiated in 1972 by D.J. Giard, et al. through explant culture of lung carcinomatous tissue from a 58-year-old caucasian male. - ATCC","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF_(SC-5916)","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin.","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-5916","treatment":"EtOH_0.02pct","treatment description":"1 h with 0.02% EtOH (Myers)","protocol":"PCR1x","protocol description":"1-cycle of PCR (Myers)","controlid":"SL475","labexpid":"SL1205","replicate":"1","replicate description":"tier 1","original_filename":"GSM803456_hg19_wgEncodeHaibTfbsA549Ctcfsc5916Pcr1xEtoh02RawRep2.bigWig"},"geolst":["GSM803456"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq A549 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM803456_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14011","24001","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"A549","cell organism":"human","cell description":"epithelial cell line derived from a lung carcinoma tissue. (PMID: 175022), This line was initiated in 1972 by D.J. Giard, et al. through explant culture of lung carcinomatous tissue from a 58-year-old caucasian male. - ATCC","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF_(SC-5916)","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin.","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-5916","treatment":"EtOH_0.02pct","treatment description":"1 h with 0.02% EtOH (Myers)","protocol":"PCR1x","protocol description":"1-cycle of PCR (Myers)","controlid":"SL475","labexpid":"SL1205","replicate":"1","replicate description":"tier 1","original_filename":"GSM803456_hg19_wgEncodeHaibTfbsA549Ctcfsc5916Pcr1xEtoh02RawRep1.bigWig"},"geolst":["GSM803456"]},{"type":"bigWig","name":"UT-A ChipSeq A549 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822289_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14011","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"A549","cell organism":"human","cell description":"epithelial cell line derived from a lung carcinoma tissue. (PMID: 175022), This line was initiated in 1972 by D.J. Giard, et al. through explant culture of lung carcinomatous tissue from a 58-year-old caucasian male. - ATCC","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"A549/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822289_hg19_wgEncodeOpenChromChipA549CtcfBaseOverlapSignal.bigWig"},"geolst":["GSM822289"]},{"type":"bigWig","name":"UW ChipSeq WI-38 CTCFRep1","url":"http://egg.wustl.edu/d/hg19/GSM1022637_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13114","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"WI-38","cell organism":"human","cell description":"embryonic lung fibroblast cells, hTERT immortalized, includes Raf1 construct","cell karyotype":"normal","cell lineage":"endoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH001903","labexpid":"DS18347","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"1","original_filename":"GSM1022637_hg19_wgEncodeUwTfbsWi38CtcfStdRawRep1.bigWig"},"geolst":["GSM1022637"]},{"type":"bigWig","name":"UW ChipSeq HA-sp CTCFRep2","url":"http://egg.wustl.edu/d/hg19/GSM1022668_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13077","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"HA-sp","cell organism":"human","cell description":"astrocytes spinal cord","cell karyotype":"normal","cell lineage":"ectoderm","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000974","labexpid":"DS18987","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"2","original_filename":"GSM1022668_hg19_wgEncodeUwTfbsHaspCtcfStdRawRep2.bigWig"},"geolst":["GSM1022668"]},{"type":"bigWig","name":"Stam HCFaa CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749732_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13080","24001","30004"],"details":{"cell":"HCFaa","cell organism":"Human","cell description":"Human Cardiac Fibroblasts-Adult Atrial","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749732_hg19_wgEncodeUwTfbsHcfaaCtcfStdRawRep1.bigWig"},"geolst":["GSM749732"]},{"type":"bigWig","name":"UT-A ChipSeq MCF-7 serum","url":"http://egg.wustl.edu/d/hg19/GSM1006878_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14028","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH000589","labversion":"baseAlignCounts.pl v 1","replicate":"1,2","cell sex":"F","treatment":"serum_starved_media","treatment description":"Grown with normal serum levels (10%), then switched to media containing low level of FBS (0.05%) for 72 hours","antibody":"CTCF","original_filename":"GSM1006878_hg19_wgEncodeOpenChromChipMcf7CtcfSerumstvdBaseOverlapSignal.bigWig"},"geolst":["GSM1006878"]},{"type":"bigWig","name":"UT-A ChipSeq MCF-7 serum","url":"http://egg.wustl.edu/d/hg19/GSM1006878_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14028","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH000589","labversion":"baseAlignCounts.pl v 1","replicate":"1,2","cell sex":"F","treatment":"serum_starved_media","treatment description":"Grown with normal serum levels (10%), then switched to media containing low level of FBS (0.05%) for 72 hours","antibody":"CTCF","original_filename":"GSM1006878_hg19_wgEncodeOpenChromChipMcf7CtcfSerumstvdSig.bigWig"},"geolst":["GSM1006878"]},{"type":"bigWig","name":"Bernstein HSMM CTCF","url":"http://egg.wustl.edu/d/hg19/GSM733762_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13050","24001","30003"],"details":{"cell":"HSMM","cell organism":"Human","cell description":"Normal Human Skeletal Muscle Myoblasts","cell karyotype":"normal","cell sex":"B","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","original_filename":"GSM733762_hg19_wgEncodeBroadHistoneHsmmCtcfStdSig.bigWig"},"geolst":["GSM733762"]},{"type":"bigWig","name":"UW ChipSeq HAc CTCFRep2","url":"http://egg.wustl.edu/d/hg19/GSM1022662_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13125","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"HAc","cell organism":"human","cell description":"astrocytes-cerebellar","cell karyotype":"normal","cell lineage":"ectoderm","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH002165","labexpid":"DS18312","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"2","original_filename":"GSM1022662_hg19_wgEncodeUwTfbsHacCtcfStdRawRep2.bigWig"},"geolst":["GSM1022662"]},{"type":"bigWig","name":"UT-A ChipSeq GM20000 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1006873_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14047","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003449","labversion":"baseAlignCounts.pl v 1","replicate":"1","cell sex":"M","antibody":"CTCF","original_filename":"GSM1006873_hg19_wgEncodeOpenChromChipGm20000CtcfSigRep1.bigWig"},"geolst":["GSM1006873"]},{"type":"bigWig","name":"Stam GM12873 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749730_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13096","24001","30004"],"details":{"cell":"GM12873","cell organism":"Human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749730_hg19_wgEncodeUwTfbsGm12873CtcfStdRawRep1.bigWig"},"geolst":["GSM749730"]},{"type":"bigWig","name":"Stam HeLa-S3 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749739_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14001","24001","30004"],"details":{"cell":"HeLa-S3","cell organism":"Human","cell description":"cervical carcinoma","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749739_hg19_wgEncodeUwTfbsHelas3CtcfStdRawRep2.bigWig"},"geolst":["GSM749739"]},{"type":"bigWig","name":"UW ChipSeq AG04450 CTCFRep2","url":"http://egg.wustl.edu/d/hg19/GSM1022635_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["12011","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"AG04450","cell organism":"human","cell description":"fetal lung fibroblast","cell karyotype":"normal","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000930","labexpid":"DS18603","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"2","original_filename":"GSM1022635_hg19_wgEncodeUwTfbsAg04450CtcfStdRawRep2.bigWig"},"geolst":["GSM1022635"]},{"type":"bigWig","name":"Stam HCPEpiC CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749735_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13082","24001","30004"],"details":{"cell":"HCPEpiC","cell organism":"Human","cell description":"Human Choroid Plexus Epithelial Cells","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749735_hg19_wgEncodeUwTfbsHcpeCtcfStdRawRep1.bigWig"},"geolst":["GSM749735"]},{"type":"bigWig","name":"Stam HRE CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749737_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13087","24001","30004"],"details":{"cell":"HRE","cell organism":"Human","cell description":"Human Renal Epithelial cells (normal)","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749737_hg19_wgEncodeUwTfbsHreCtcfStdRawRep2.bigWig"},"geolst":["GSM749737"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq MCF-7 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1010734_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14028","24001","30015"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin. Antibody Target: CTCF","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotechnology","antibody vendorid":"sc-5916","controlid":"SL16757,SL13504","labexpid":"SL13463,SL16333","softwareversion":"MACS","cell sex":"F","antibody":"CTCF_(SC-5916)","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v042211.1","protocol description":"Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)","replicate":"1,2","original_filename":"GSM1010734_hg19_wgEncodeHaibTfbsMcf7CtcfcV0422111RawRep1.bigWig"},"geolst":["GSM1010734"]},{"type":"bigWig","name":"UT-A ChipSeq MCF-7 serum","url":"http://egg.wustl.edu/d/hg19/GSM1006875_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14028","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH000589","labversion":"baseAlignCounts.pl v 1","replicate":"1,2","cell sex":"F","treatment":"serum_stimulated_media","treatment description":"Grown with normal serum levels (10%), then switched back to normal serum levels (10% FBS) for 3 hours.","antibody":"CTCF","original_filename":"GSM1006875_hg19_wgEncodeOpenChromChipMcf7CtcfSerumstimBaseOverlapSignal.bigWig"},"geolst":["GSM1006875"]},{"type":"bigWig","name":"UT-A ChipSeq MCF-7 serum","url":"http://egg.wustl.edu/d/hg19/GSM1006875_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14028","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH000589","labversion":"baseAlignCounts.pl v 1","replicate":"1,2","cell sex":"F","treatment":"serum_stimulated_media","treatment description":"Grown with normal serum levels (10%), then switched back to normal serum levels (10% FBS) for 3 hours.","antibody":"CTCF","original_filename":"GSM1006875_hg19_wgEncodeOpenChromChipMcf7CtcfSerumstimSig.bigWig"},"geolst":["GSM1006875"]},{"type":"bigWig","name":"UT-A ChipSeq GM19239 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822277_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13066","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM19239","cell organism":"human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, Yoruba in Ibadan, Nigera, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"generic_male","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822277_hg19_wgEncodeOpenChromChipGm19239CtcfSig.bigWig"},"geolst":["GSM822277"]},{"type":"bigWig","name":"Bernstein K562 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM733719_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14018","24001","30003"],"details":{"cell":"K562","cell organism":"Human","cell description":"leukemia","cell karyotype":"cancer","cell lineage":"The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","original_filename":"GSM733719_hg19_wgEncodeBroadHistoneK562CtcfStdSig.bigWig"},"geolst":["GSM733719"]},{"type":"bigWig","name":"UT-A ChipSeq GM19239 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822277_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13066","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM19239","cell organism":"human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, Yoruba in Ibadan, Nigera, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"generic_male","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822277_hg19_wgEncodeOpenChromChipGm19239CtcfBaseOverlapSignal.bigWig"},"geolst":["GSM822277"]},{"type":"bigWig","name":"Bernstein NH-A CTCF","url":"http://egg.wustl.edu/d/hg19/GSM733765_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13054","24001","30003"],"details":{"cell":"NH-A","cell organism":"Human","cell description":"normal human astrocytes","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","original_filename":"GSM733765_hg19_wgEncodeBroadHistoneNhaCtcfStdSig.bigWig"},"geolst":["GSM733765"]},{"type":"bigWig","name":"UT-A ChipSeq GM12891 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822294_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13063","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12891","cell organism":"human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1463, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"generic_male","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822294_hg19_wgEncodeOpenChromChipGm12891CtcfSig.bigWig"},"geolst":["GSM822294"]},{"type":"bigWig","name":"UT-A ChipSeq GM12891 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822294_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13063","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12891","cell organism":"human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1463, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"generic_male","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822294_hg19_wgEncodeOpenChromChipGm12891CtcfBaseOverlapSignal.bigWig"},"geolst":["GSM822294"]},{"type":"bigWig","name":"Broad ChipSeq A549 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1003582_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14011","24001","30003"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"A549/DEX_100nM/Input/std","replicate":"1,2","softwareversion":"ScriptureVPaperR3","cell sex":"M","antibody":"CTCF","treatment":"DEX_100nM","treatment description":"1 h with 100 nM Dexamethasone (Myers)","control":"std","control description":"Standard input signal for most experiments.","labversion":"Illumina_HiSeq_2000","labversion description":"Illumina HiSeq 2000","original_filename":"GSM1003582_hg19_wgEncodeBroadHistoneA549CtcfDex100nmSig.bigWig"},"geolst":["GSM1003582"]},{"type":"bigWig","name":"UT-A ChipSeq HUVEC CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822279_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13052","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"HUVEC","cell organism":"human","cell description":"umbilical vein endothelial cells","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"HUVEC/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822279_hg19_wgEncodeOpenChromChipHuvecCtcfBaseOverlapSignal.bigWig"},"geolst":["GSM822279"]},{"type":"bigWig","name":"UT-A ChipSeq HUVEC CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822279_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13052","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"HUVEC","cell organism":"human","cell description":"umbilical vein endothelial cells","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"HUVEC/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822279_hg19_wgEncodeOpenChromChipHuvecCtcfSig.bigWig"},"geolst":["GSM822279"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq HCT-116 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1010903_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14005","24001","30015"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin. Antibody Target: CTCF","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotechnology","antibody vendorid":"sc-5916","controlid":"SL12247,SL12246","labexpid":"SL13074,SL12242","softwareversion":"MACS","cell sex":"M","antibody":"CTCF_(SC-5916)","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v042211.1","protocol description":"Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)","replicate":"1,2","original_filename":"GSM1010903_hg19_wgEncodeHaibTfbsHct116CtcfcV0422111RawRep2.bigWig"},"geolst":["GSM1010903"]},{"type":"bigWig","name":"Stam HL-60 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749688_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14006","24001","30004"],"details":{"cell":"HL-60","cell organism":"Human","cell description":"Human promyelocytic leukemia cells. (PMID: 276884)","cell karyotype":"cancer","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749688_hg19_wgEncodeUwTfbsHl60CtcfStdRawRep1.bigWig"},"geolst":["GSM749688"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq HepG2 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM803486_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13048","24001","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"HepG2","cell organism":"human","cell description":"liver carcinoma","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF_(SC-5916)","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin.","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-5916","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v041610.1","protocol description":"2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)","controlid":"SL1781","labexpid":"SL3176","replicate":"1","replicate description":"tier 1","original_filename":"GSM803486_hg19_wgEncodeHaibTfbsHepg2Ctcfsc5916V0416101RawRep2.bigWig"},"geolst":["GSM803486"]},{"type":"bigWig","name":"UT-A ChipSeq ProgFib CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822272_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13069","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"ProgFib","cell organism":"human","cell description":"fibroblasts, Hutchinson-Gilford progeria syndrome (cell line HGPS, HGADFN167, progeria research foundation)","cell karyotype":"unknown","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"ProgFib/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822272_hg19_wgEncodeOpenChromChipProgfibCtcfSig.bigWig"},"geolst":["GSM822272"]},{"type":"bigWig","name":"UT-A ChipSeq ProgFib CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822272_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13069","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"ProgFib","cell organism":"human","cell description":"fibroblasts, Hutchinson-Gilford progeria syndrome (cell line HGPS, HGADFN167, progeria research foundation)","cell karyotype":"unknown","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"ProgFib/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822272_hg19_wgEncodeOpenChromChipProgfibCtcfBaseOverlapSignal.bigWig"},"geolst":["GSM822272"]},{"type":"bigWig","name":"Stam HEK293 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749687_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["12012","24001","30004"],"details":{"cell":"HEK293","cell organism":"Human","cell description":"embryonic kidney. (PMID: 11967234)","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749687_hg19_wgEncodeUwTfbsHek293CtcfStdRawRep2.bigWig"},"geolst":["GSM749687"]},{"type":"bigWig","name":"Stam HPAF CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749681_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13085","24001","30004"],"details":{"cell":"HPAF","cell organism":"Human","cell description":"Human Pulmonary Artery Fibroblasts","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749681_hg19_wgEncodeUwTfbsHpafCtcfStdRawRep1.bigWig"},"geolst":["GSM749681"]},{"type":"bigWig","name":"Stam HepG2 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749683_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13048","24001","30004"],"details":{"cell":"HepG2","cell organism":"Human","cell description":"liver carcinoma","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749683_hg19_wgEncodeUwTfbsHepg2CtcfStdRawRep2.bigWig"},"geolst":["GSM749683"]},{"type":"bigWig","name":"Stam Caco-2 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749689_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14004","24001","30004"],"details":{"cell":"Caco-2","cell organism":"Human","cell description":"colorectal adenocarcinoma. (PMID: 1939345)","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749689_hg19_wgEncodeUwTfbsCaco2CtcfStdRawRep2.bigWig"},"geolst":["GSM749689"]},{"type":"bigWig","name":"UW ChipSeq MCF-7 CTCFRep1","url":"http://egg.wustl.edu/d/hg19/GSM1022658_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14028","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"MCF-7","cell organism":"human","cell description":"mammary gland, adenocarcinoma. (PMID: 4357757), newly promoted to tier 2: not in 2011 analysis","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000968","labexpid":"DS16200","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"1","original_filename":"GSM1022658_hg19_wgEncodeUwTfbsMcf7CtcfStdRawRep1.bigWig"},"geolst":["GSM1022658"]},{"type":"bigWig","name":"UW ChipSeq GM12867 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM849301_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13139","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"ChIP-seq","cell":"GM12867","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed.","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"GM12867/None/Input/std","labexpid":"DS10995","labversion":"Bowtie 0.12.7","replicate":"1","replicate description":"tier 1","original_filename":"GSM849301_hg19_wgEncodeUwTfbsGm12867CtcfStdRawRep2.bigWig"},"geolst":["GSM849301"]},{"type":"bigWig","name":"UW ChipSeq GM12867 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM849301_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13139","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"ChIP-seq","cell":"GM12867","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed.","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"GM12867/None/Input/std","labexpid":"DS10995","labversion":"Bowtie 0.12.7","replicate":"1","replicate description":"tier 1","original_filename":"GSM849301_hg19_wgEncodeUwTfbsGm12867CtcfStdRawRep1.bigWig"},"geolst":["GSM849301"]},{"type":"bigWig","name":"UT-A ChipSeq GM12892 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822299_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13064","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12892","cell organism":"human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1463, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"generic_female","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822299_hg19_wgEncodeOpenChromChipGm12892CtcfSig.bigWig"},"geolst":["GSM822299"]},{"type":"bigWig","name":"UT-A ChipSeq GM12892 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822299_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13064","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12892","cell organism":"human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1463, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"generic_female","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822299_hg19_wgEncodeOpenChromChipGm12892CtcfBaseOverlapSignal.bigWig"},"geolst":["GSM822299"]},{"type":"bigWig","name":"UW ChipSeq GM12869 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM849303_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13136","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"ChIP-seq","cell":"GM12869","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed.","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"GM12869/None/Input/std","labexpid":"DS10997","labversion":"Bowtie 0.12.7","replicate":"1","replicate description":"tier 1","original_filename":"GSM849303_hg19_wgEncodeUwTfbsGm12869CtcfStdRawRep2.bigWig"},"geolst":["GSM849303"]},{"type":"bigWig","name":"UW ChipSeq GM12866 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM849305_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13138","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"ChIP-seq","cell":"GM12866","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed.","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"GM12866/None/Input/std","labexpid":"DS10994","labversion":"Bowtie 0.12.7","replicate":"1","replicate description":"tier 1","original_filename":"GSM849305_hg19_wgEncodeUwTfbsGm12866CtcfStdRawRep1.bigWig"},"geolst":["GSM849305"]},{"type":"bigWig","name":"Stanford ChipSeq A549 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1003606_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14011","24001","30018"],"details":{"lab":"Stanford","lab description":"Snyder - Stanford University","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"A549","cell organism":"human","cell description":"epithelial cell line derived from a lung carcinoma tissue. (PMID: 175022), This line was initiated in 1972 by D.J. Giard, et al. through explant culture of lung carcinomatous tissue from a 58-year-old caucasian male. - ATCC, newly promoted to tier 2: not in 2011 analysis","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"CTCF_(SC-15914)","antibody antibodydescription":"Goat polyclonal, epitope mapping near the C-terminus of CTCF of human origin. Antibody Target: CTCF","antibody targetdescription":"Transcriptional regulator with 11 highly conserved zinc finger domains. Depending on context, can bind a histone acetyltransferase (HAT)-containing complex and function as transcriptional activator or bind a histone deacetylase (HDAC)-containing complex and function as transcriptional repressor. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation. Can dimerize, mediating long-range chromatin looping. When bound to chromatin, provides an anchor point for nucleosomes positioning. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites.","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-15914","control":"IgG-rab","control description":"Input signal from Normal Rabbit IgG ChIP-seq.","controlid":"wgEncodeEH002819","original_filename":"GSM1003606_hg19_wgEncodeSydhTfbsA549CtcfbIggrabSig.bigWig"},"geolst":["GSM1003606"]},{"type":"bigWig","name":"Stam GM12875 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749764_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13098","24001","30004"],"details":{"cell":"GM12875","cell organism":"Human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749764_hg19_wgEncodeUwTfbsGm12875CtcfStdRawRep1.bigWig"},"geolst":["GSM749764"]},{"type":"bigWig","name":"Stam GM12864 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749762_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13093","24001","30004"],"details":{"cell":"GM12864","cell organism":"Human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749762_hg19_wgEncodeUwTfbsGm12864CtcfStdRawRep2.bigWig"},"geolst":["GSM749762"]},{"type":"bigWig","name":"Broad ChipSeq Monocytes-CD14+ RO01746","url":"http://egg.wustl.edu/d/hg19/GSM1003508_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13068","24001","30003"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"Monocytes-CD14+_RO01746/None/Input/std","replicate":"1,2","softwareversion":"ScriptureVPaperR3","cell sex":"F","antibody":"CTCF","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","labversion":"Illumina_HiSeq_2000","labversion description":"Illumina HiSeq 2000","original_filename":"GSM1003508_hg19_wgEncodeBroadHistoneMonocd14ro1746CtcfSig.bigWig"},"geolst":["GSM1003508"]},{"type":"bigWig","name":"Stam WERI-Rb-1 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749768_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14010","24001","30004"],"details":{"cell":"WERI-Rb-1","cell organism":"Human","cell description":"retinoblastoma (PMID: 844036)","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749768_hg19_wgEncodeUwTfbsWerirb1CtcfStdRawRep1.bigWig"},"geolst":["GSM749768"]},{"type":"bigWig","name":"Stam HeLa-S3 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749729_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14001","24001","30004"],"details":{"cell":"HeLa-S3","cell organism":"Human","cell description":"cervical carcinoma","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749729_hg19_wgEncodeUwTfbsHelas3CtcfStdRawRep1.bigWig"},"geolst":["GSM749729"]},{"type":"bigWig","name":"UW ChipSeq HAc CTCFRep1","url":"http://egg.wustl.edu/d/hg19/GSM1022661_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13125","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"HAc","cell organism":"human","cell description":"astrocytes-cerebellar","cell karyotype":"normal","cell lineage":"ectoderm","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH002165","labexpid":"DS18313","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"1","original_filename":"GSM1022661_hg19_wgEncodeUwTfbsHacCtcfStdRawRep1.bigWig"},"geolst":["GSM1022661"]},{"type":"bigWig","name":"Stam GM12865 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749725_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13094","24001","30004"],"details":{"cell":"GM12865","cell organism":"Human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749725_hg19_wgEncodeUwTfbsGm12865CtcfStdRawRep2.bigWig"},"geolst":["GSM749725"]},{"type":"bigWig","name":"Broad ChipSeq CD20+ CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1003474_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13132","24001","30003"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"CD20+/None/Input/std","replicate":"1,3,2","softwareversion":"ScriptureVPaperR3","cell sex":"F","antibody":"CTCF","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","labversion":"Illumina_HiSeq_2000","labversion description":"Illumina HiSeq 2000","original_filename":"GSM1003474_hg19_wgEncodeBroadHistoneCd20CtcfSig.bigWig"},"geolst":["GSM1003474"]},{"type":"bigWig","name":"UT-A ChipSeq A549 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822289_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14011","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"A549","cell organism":"human","cell description":"epithelial cell line derived from a lung carcinoma tissue. (PMID: 175022), This line was initiated in 1972 by D.J. Giard, et al. through explant culture of lung carcinomatous tissue from a 58-year-old caucasian male. - ATCC","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"A549/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822289_hg19_wgEncodeOpenChromChipA549CtcfSig.bigWig"},"geolst":["GSM822289"]},{"type":"bigWig","name":"UW ChipSeq NHDF-neo CTCFRep2","url":"http://egg.wustl.edu/d/hg19/GSM1022676_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13090","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"NHDF-neo","cell organism":"human","cell description":"neonatal dermal fibroblasts","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000972","labexpid":"DS16205","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"2","original_filename":"GSM1022676_hg19_wgEncodeUwTfbsNhdfneoCtcfStdRawRep2.bigWig"},"geolst":["GSM1022676"]},{"type":"bigWig","name":"UW ChipSeq NB4 CTCFRep1","url":"http://egg.wustl.edu/d/hg19/GSM1022643_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14008","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"NB4","cell organism":"human","cell description":"acute promyelocytic leukemia cell line. (PMID: 1995093)","cell karyotype":"cancer","cell lineage":"mesoderm","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000970","labexpid":"DS16345","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"1","original_filename":"GSM1022643_hg19_wgEncodeUwTfbsNb4CtcfStdRawRep1.bigWig"},"geolst":["GSM1022643"]},{"type":"bigWig","name":"UW ChipSeq A549 CTCFRep1","url":"http://egg.wustl.edu/d/hg19/GSM1022640_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14011","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"A549","cell organism":"human","cell description":"epithelial cell line derived from a lung carcinoma tissue. (PMID: 175022), This line was initiated in 1972 by D.J. Giard, et al. through explant culture of lung carcinomatous tissue from a 58-year-old caucasian male. - ATCC, newly promoted to tier 2: not in 2011 analysis","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH001904","labexpid":"DS18303","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"1","original_filename":"GSM1022640_hg19_wgEncodeUwTfbsA549CtcfStdRawRep1.bigWig"},"geolst":["GSM1022640"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq HCT-116 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1010903_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14005","24001","30015"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin. Antibody Target: CTCF","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotechnology","antibody vendorid":"sc-5916","controlid":"SL12247,SL12246","labexpid":"SL13074,SL12242","softwareversion":"MACS","cell sex":"M","antibody":"CTCF_(SC-5916)","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v042211.1","protocol description":"Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)","replicate":"1,2","original_filename":"GSM1010903_hg19_wgEncodeHaibTfbsHct116CtcfcV0422111RawRep1.bigWig"},"geolst":["GSM1010903"]},{"type":"bigWig","name":"Stam AG04449 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749695_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["12010","24001","30004"],"details":{"cell":"AG04449","cell organism":"Human","cell description":"fetal buttock/thigh fibroblast","cell karyotype":"normal","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749695_hg19_wgEncodeUwTfbsAg04449CtcfStdRawRep1.bigWig"},"geolst":["GSM749695"]},{"type":"bigWig","name":"Stam SK-N-SH RA CTCF","url":"http://egg.wustl.edu/d/hg19/GSM749693_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14009","24001","30004"],"details":{"cell":"SK-N-SH_RA","cell organism":"Human","cell description":"neuroblastoma cell line, treatment: differentiated with retinoic acid. (Biedler, et al. Morphology and Growth, Tumorigenicity, and Cytogenetics of Human Neuroblastoma Cells in Continuous Culture. Cancer Research 33, 2643-2652, November 1973.)","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749693_hg19_wgEncodeUwTfbsSknshraCtcfStdRawRep1.bigWig"},"geolst":["GSM749693"]},{"type":"bigWig","name":"Stam HPF CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749699_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13086","24001","30004"],"details":{"cell":"HPF","cell organism":"Human","cell description":"Human Pulmonary Fibroblasts isolated from lung tissue","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749699_hg19_wgEncodeUwTfbsHpfCtcfStdRawRep1.bigWig"},"geolst":["GSM749699"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq T-47D CTCF","url":"http://egg.wustl.edu/d/hg19/GSM803348_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14014","24001","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"T-47D","cell organism":"human","cell description":"T-47D is a human epithelial cell line derived from an mammary ductal carcinoma.","cell karyotype":"cancer","cell sex":"F","antibody":"CTCF_(SC-5916)","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin.","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-5916","treatment":"DMSO_0.02pct","treatment description":"1 h with 0.02% DMSO (Myers)","protocol":"v041610.2","protocol description":"2x10^7 cells, fragmentation by probe-in sonicator, one 15-cycle round of PCR (Myers)","controlid":"SL1881","labexpid":"SL2634","replicate":"1","replicate description":"tier 1","original_filename":"GSM803348_hg19_wgEncodeHaibTfbsT47dCtcfsc5916V0416102Dm002p1hRawRep1.bigWig"},"geolst":["GSM803348"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq T-47D CTCF","url":"http://egg.wustl.edu/d/hg19/GSM803348_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14014","24001","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"T-47D","cell organism":"human","cell description":"T-47D is a human epithelial cell line derived from an mammary ductal carcinoma.","cell karyotype":"cancer","cell sex":"F","antibody":"CTCF_(SC-5916)","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin.","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-5916","treatment":"DMSO_0.02pct","treatment description":"1 h with 0.02% DMSO (Myers)","protocol":"v041610.2","protocol description":"2x10^7 cells, fragmentation by probe-in sonicator, one 15-cycle round of PCR (Myers)","controlid":"SL1881","labexpid":"SL2634","replicate":"1","replicate description":"tier 1","original_filename":"GSM803348_hg19_wgEncodeHaibTfbsT47dCtcfsc5916V0416102Dm002p1hRawRep2.bigWig"},"geolst":["GSM803348"]},{"type":"bigWig","name":"UW ChipSeq BE2 C","url":"http://egg.wustl.edu/d/hg19/GSM1022653_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14030","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"BE2_C","cell organism":"human","cell description":"neuroblastoma, BE-C is a clone of the SK-N-BE neuroblastoma cell line (see ATCC CRL-2271) that was established in November of 1972 from a bone marrow biopsy taken from a 2-year-old individual with disseminated neuroblastoma after repeated courses of chemotherapy and radiotherapy.","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH001892","labexpid":"DS18307","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"1","original_filename":"GSM1022653_hg19_wgEncodeUwTfbsBe2cCtcfStdRawRep1.bigWig"},"geolst":["GSM1022653"]},{"type":"bigWig","name":"UW ChipSeq HCT-116 CTCFRep1","url":"http://egg.wustl.edu/d/hg19/GSM1022652_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14005","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"HCT-116","cell organism":"human","cell description":"colorectal carcinoma (PMID: 7214343)","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000950","labexpid":"DS18710","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"1","original_filename":"GSM1022652_hg19_wgEncodeUwTfbsHct116CtcfStdRawRep1.bigWig"},"geolst":["GSM1022652"]},{"type":"bigWig","name":"Stam BJ CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749752_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13075","24001","30004"],"details":{"cell":"BJ","cell organism":"Human","cell description":"skin fibroblast, The line was established from skin taken from normal foreskin. - ATCC.  (PMID: 9916803)","cell karyotype":"normal","cell lineage":"ectoderm","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749752_hg19_wgEncodeUwTfbsBjCtcfStdRawRep2.bigWig"},"geolst":["GSM749752"]},{"type":"bigWig","name":"Stam AG10803 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749714_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13073","24001","30004"],"details":{"cell":"AG10803","cell organism":"Human","cell description":"abdominal skin fibroblasts from apparently heathly 22 year old","cell karyotype":"8% of the cells examined showing random chromosome loss, 2% showing random chromosome gain, and 2% showing 69,XYY -Coriell","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749714_hg19_wgEncodeUwTfbsAg10803CtcfStdRawRep1.bigWig"},"geolst":["GSM749714"]},{"type":"bigWig","name":"UT-A ChipSeq GM20000 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1006873_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14047","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003449","labversion":"baseAlignCounts.pl v 1","replicate":"1","cell sex":"M","antibody":"CTCF","original_filename":"GSM1006873_hg19_wgEncodeOpenChromChipGm20000CtcfBaseOverlapSignalRep1.bigWig"},"geolst":["GSM1006873"]},{"type":"bigWig","name":"UT-A ChipSeq LNCaP androgen","url":"http://egg.wustl.edu/d/hg19/GSM1006887_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14012","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003452","labversion":"baseAlignCounts.pl v 1","replicate":"1","cell sex":"M","treatment":"androgen","treatment description":"12 hrs with 1 nM Methyltrienolone (R1881) (Crawford)","antibody":"CTCF","original_filename":"GSM1006887_hg19_wgEncodeOpenChromChipLncapCtcfAndroBaseOverlapSignalRep1.bigWig"},"geolst":["GSM1006887"]},{"type":"bigWig","name":"Bernstein HSMMtube CTCF","url":"http://egg.wustl.edu/d/hg19/GSM733783_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13051","24001","30003"],"details":{"cell":"HSMMtube","cell organism":"Human","cell description":"Normal Human Skeletal Muscle Myotubes","cell karyotype":"normal","cell sex":"B","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","original_filename":"GSM733783_hg19_wgEncodeBroadHistoneHsmmtCtcfStdSig.bigWig"},"geolst":["GSM733783"]},{"type":"bigWig","name":"Stam HBMEC CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749710_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13078","24001","30004"],"details":{"cell":"HBMEC","cell organism":"Human","cell description":"Human Brain Microvascular Endothelial Cells","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749710_hg19_wgEncodeUwTfbsHbmecCtcfStdRawRep2.bigWig"},"geolst":["GSM749710"]},{"type":"bigWig","name":"UW ChipSeq GM12868 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM849300_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13135","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"ChIP-seq","cell":"GM12868","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed.","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"GM12868/None/Input/std","labexpid":"DS10996","labversion":"Bowtie 0.12.7","replicate":"1","replicate description":"tier 1","original_filename":"GSM849300_hg19_wgEncodeUwTfbsGm12868CtcfStdRawRep1.bigWig"},"geolst":["GSM849300"]},{"type":"bigWig","name":"UW ChipSeq NHDF-neo CTCFRep1","url":"http://egg.wustl.edu/d/hg19/GSM1022675_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13090","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"NHDF-neo","cell organism":"human","cell description":"neonatal dermal fibroblasts","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000972","labexpid":"DS16204","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"1","original_filename":"GSM1022675_hg19_wgEncodeUwTfbsNhdfneoCtcfStdRawRep1.bigWig"},"geolst":["GSM1022675"]},{"type":"bigWig","name":"Stam HEK293 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749668_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["12012","24001","30004"],"details":{"cell":"HEK293","cell organism":"Human","cell description":"embryonic kidney. (PMID: 11967234)","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749668_hg19_wgEncodeUwTfbsHek293CtcfStdRawRep1.bigWig"},"geolst":["GSM749668"]},{"type":"bigWig","name":"Stam AG10803 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749759_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13073","24001","30004"],"details":{"cell":"AG10803","cell organism":"Human","cell description":"abdominal skin fibroblasts from apparently heathly 22 year old","cell karyotype":"8% of the cells examined showing random chromosome loss, 2% showing random chromosome gain, and 2% showing 69,XYY -Coriell","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749759_hg19_wgEncodeUwTfbsAg10803CtcfStdRawRep2.bigWig"},"geolst":["GSM749759"]},{"type":"bigWig","name":"Stam HMEC CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749753_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13049","24001","30004"],"details":{"cell":"HMEC","cell organism":"Human","cell description":"Human Mammary Epithelial Cells","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749753_hg19_wgEncodeUwTfbsHmecCtcfStdRawRep1.bigWig"},"geolst":["GSM749753"]},{"type":"bigWig","name":"Bernstein HeLa-S3 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM733785_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14001","24001","30003"],"details":{"cell":"HeLa-S3","cell organism":"Human","cell description":"cervical carcinoma","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","original_filename":"GSM733785_hg19_wgEncodeBroadHistoneHelas3CtcfStdSig.bigWig"},"geolst":["GSM733785"]},{"type":"bigWig","name":"Stam HPAF CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749751_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13085","24001","30004"],"details":{"cell":"HPAF","cell organism":"Human","cell description":"Human Pulmonary Artery Fibroblasts","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749751_hg19_wgEncodeUwTfbsHpafCtcfStdRawRep2.bigWig"},"geolst":["GSM749751"]},{"type":"bigWig","name":"Stam HUVEC CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749749_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13052","24001","30004"],"details":{"cell":"HUVEC","cell organism":"Human","cell description":"umbilical vein endothelial cells","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749749_hg19_wgEncodeUwTfbsHuvecCtcfStdRawRep2.bigWig"},"geolst":["GSM749749"]},{"type":"bigWig","name":"UT-A ChipSeq GM12878 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822312_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13047","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"GM12878/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822312_hg19_wgEncodeOpenChromChipGm12878CtcfBaseOverlapSignal.bigWig"},"geolst":["GSM822312"]},{"type":"bigWig","name":"UT-A ChipSeq GM12878 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822312_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13047","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"GM12878/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822312_hg19_wgEncodeOpenChromChipGm12878CtcfSig.bigWig"},"geolst":["GSM822312"]},{"type":"bigWig","name":"UW ChipSeq HFF-Myc CTCFRep1","url":"http://egg.wustl.edu/d/hg19/GSM1022671_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13104","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"HFF-Myc","cell organism":"human","cell description":"foreskin fibroblast cells expressing canine cMyc","cell karyotype":"normal","cell lineage":"fibroblast","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH001896","labexpid":"DS18322","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"1","original_filename":"GSM1022671_hg19_wgEncodeUwTfbsHffmycCtcfStdRawRep1.bigWig"},"geolst":["GSM1022671"]},{"type":"bigWig","name":"Bernstein NHLF CTCF","url":"http://egg.wustl.edu/d/hg19/GSM733695_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13057","24001","30003"],"details":{"cell":"NHLF","cell organism":"Human","cell description":"Normal Human Lung Fibroblasts","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","original_filename":"GSM733695_hg19_wgEncodeBroadHistoneNhlfCtcfStdSig.bigWig"},"geolst":["GSM733695"]},{"type":"bigWig","name":"UT-A ChipSeq MCF-7 vehicle","url":"http://egg.wustl.edu/d/hg19/GSM822308_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14028","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"MCF-7","cell organism":"human","cell description":"mammary gland, adenocarcinoma. (PMID: 4357757)","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"F","treatment":"vehicle","treatment description":"Charcoal stripped hormone-free FBS for 72 hours (Crawford)","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"MCF-7/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822308_hg19_wgEncodeOpenChromChipMcf7CtcfVehSig.bigWig"},"geolst":["GSM822308"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq K562 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1010820_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14018","24001","30015"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin. Antibody Target: CTCF","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotechnology","antibody vendorid":"sc-5916","controlid":"SL1396,SL1397","labexpid":"SL3075,SL5605","softwareversion":"MACS","cell sex":"F","antibody":"CTCF_(SC-5916)","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"PCR1x","protocol description":"one 15-cycle round of PCR (Myers)","replicate":"1,2","original_filename":"GSM1010820_hg19_wgEncodeHaibTfbsK562CtcfcPcr1xRawRep1V2.bigWig"},"geolst":["GSM1010820"]},{"type":"bigWig","name":"UW ChipSeq HFF CTCFRep1","url":"http://egg.wustl.edu/d/hg19/GSM1022644_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13122","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"HFF","cell organism":"human","cell description":"foreskin fibroblast","cell karyotype":"normal","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH002043","labexpid":"DS18318","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"1","original_filename":"GSM1022644_hg19_wgEncodeUwTfbsHffCtcfStdRawRep1.bigWig"},"geolst":["GSM1022644"]},{"type":"bigWig","name":"UW ChipSeq GM12871 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM849304_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13137","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"ChIP-seq","cell":"GM12871","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed.","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"GM12871/None/Input/std","labexpid":"DS10999","labversion":"Bowtie 0.12.7","replicate":"1","replicate description":"tier 1","original_filename":"GSM849304_hg19_wgEncodeUwTfbsGm12871CtcfStdRawRep2.bigWig"},"geolst":["GSM849304"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq HepG2 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM803486_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13048","24001","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"HepG2","cell organism":"human","cell description":"liver carcinoma","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF_(SC-5916)","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin.","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-5916","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v041610.1","protocol description":"2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)","controlid":"SL1781","labexpid":"SL3176","replicate":"1","replicate description":"tier 1","original_filename":"GSM803486_hg19_wgEncodeHaibTfbsHepg2Ctcfsc5916V0416101RawRep1.bigWig"},"geolst":["GSM803486"]},{"type":"bigWig","name":"Stam GM06990 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749705_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13076","24001","30004"],"details":{"cell":"GM06990","cell organism":"Human","cell description":"Lymphoblastoid, International HapMap Project, CEPH/Utah, Treatment: Epstein-Barr Virus transformed","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749705_hg19_wgEncodeUwTfbsGm06990CtcfStdRawRep2.bigWig"},"geolst":["GSM749705"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq K562 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1010820_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14018","24001","30015"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin. Antibody Target: CTCF","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotechnology","antibody vendorid":"sc-5916","controlid":"SL1396,SL1397","labexpid":"SL3075,SL5605","softwareversion":"MACS","cell sex":"F","antibody":"CTCF_(SC-5916)","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"PCR1x","protocol description":"one 15-cycle round of PCR (Myers)","replicate":"1,2","original_filename":"GSM1010820_hg19_wgEncodeHaibTfbsK562CtcfcPcr1xRawRep2.bigWig"},"geolst":["GSM1010820"]},{"type":"bigWig","name":"Stam AG04449 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749678_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["12010","24001","30004"],"details":{"cell":"AG04449","cell organism":"Human","cell description":"fetal buttock/thigh fibroblast","cell karyotype":"normal","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749678_hg19_wgEncodeUwTfbsAg04449CtcfStdRawRep2.bigWig"},"geolst":["GSM749678"]},{"type":"bigWig","name":"UW ChipSeq HRPEpiC CTCFRep2","url":"http://egg.wustl.edu/d/hg19/GSM1022665_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13088","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"HRPEpiC","cell organism":"human","cell description":"retinal pigment epithelial cells","cell karyotype":"normal","cell lineage":"ectoderm","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000962","labexpid":"DS18570","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"2","original_filename":"GSM1022665_hg19_wgEncodeUwTfbsHrpeCtcfStdRawRep2.bigWig"},"geolst":["GSM1022665"]},{"type":"bigWig","name":"Stam Caco-2 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749748_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14004","24001","30004"],"details":{"cell":"Caco-2","cell organism":"Human","cell description":"colorectal adenocarcinoma. (PMID: 1939345)","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749748_hg19_wgEncodeUwTfbsCaco2CtcfStdRawRep1.bigWig"},"geolst":["GSM749748"]},{"type":"bigWig","name":"Stam GM12875 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749670_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13098","24001","30004"],"details":{"cell":"GM12875","cell organism":"Human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749670_hg19_wgEncodeUwTfbsGm12875CtcfStdRawRep2.bigWig"},"geolst":["GSM749670"]},{"type":"bigWig","name":"Stam HBMEC CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749743_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13078","24001","30004"],"details":{"cell":"HBMEC","cell organism":"Human","cell description":"Human Brain Microvascular Endothelial Cells","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749743_hg19_wgEncodeUwTfbsHbmecCtcfStdRawRep1.bigWig"},"geolst":["GSM749743"]},{"type":"bigWig","name":"Stam HCPEpiC CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749745_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13082","24001","30004"],"details":{"cell":"HCPEpiC","cell organism":"Human","cell description":"Human Choroid Plexus Epithelial Cells","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749745_hg19_wgEncodeUwTfbsHcpeCtcfStdRawRep2.bigWig"},"geolst":["GSM749745"]},{"type":"bigWig","name":"Stam GM12878 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749706_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13047","24001","30004"],"details":{"cell":"GM12878","cell organism":"Human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749706_hg19_wgEncodeUwTfbsGm12878CtcfStdRawRep2.bigWig"},"geolst":["GSM749706"]},{"type":"bigWig","name":"Stam NHEK CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749747_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13056","24001","30004"],"details":{"cell":"NHEK","cell organism":"Human","cell description":"epidermal keratinocytes","cell karyotype":"normal","cell lineage":"ectoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749747_hg19_wgEncodeUwTfbsNhekCtcfStdRawRep2.bigWig"},"geolst":["GSM749747"]},{"type":"bigWig","name":"Stam GM12874 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749741_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13097","24001","30004"],"details":{"cell":"GM12874","cell organism":"Human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749741_hg19_wgEncodeUwTfbsGm12874CtcfStdRawRep2.bigWig"},"geolst":["GSM749741"]},{"type":"bigWig","name":"Bernstein HepG2 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM733645_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13048","24001","30003"],"details":{"cell":"HepG2","cell organism":"Human","cell description":"liver carcinoma","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","original_filename":"GSM733645_hg19_wgEncodeBroadHistoneHepg2CtcfStdSig.bigWig"},"geolst":["GSM733645"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq A549 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM803453_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14011","24001","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"A549","cell organism":"human","cell description":"epithelial cell line derived from a lung carcinoma tissue. (PMID: 175022), This line was initiated in 1972 by D.J. Giard, et al. through explant culture of lung carcinomatous tissue from a 58-year-old caucasian male. - ATCC","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF_(SC-5916)","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin.","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-5916","treatment":"DEX_100nM","treatment description":"1 h with 100 nM DEX (Myers)","protocol":"PCR1x","protocol description":"1-cycle of PCR (Myers)","controlid":"SL474","labexpid":"SL1204","replicate":"1","replicate description":"tier 1","original_filename":"GSM803453_hg19_wgEncodeHaibTfbsA549Ctcfsc5916Pcr1xDex100nmRawRep2.bigWig"},"geolst":["GSM803453"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq A549 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM803453_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14011","24001","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"A549","cell organism":"human","cell description":"epithelial cell line derived from a lung carcinoma tissue. (PMID: 175022), This line was initiated in 1972 by D.J. Giard, et al. through explant culture of lung carcinomatous tissue from a 58-year-old caucasian male. - ATCC","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF_(SC-5916)","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin.","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-5916","treatment":"DEX_100nM","treatment description":"1 h with 100 nM DEX (Myers)","protocol":"PCR1x","protocol description":"1-cycle of PCR (Myers)","controlid":"SL474","labexpid":"SL1204","replicate":"1","replicate description":"tier 1","original_filename":"GSM803453_hg19_wgEncodeHaibTfbsA549Ctcfsc5916Pcr1xDex100nmRawRep1.bigWig"},"geolst":["GSM803453"]},{"type":"bigWig","name":"Bernstein NHDF-Ad CTCF","url":"http://egg.wustl.edu/d/hg19/GSM733744_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13055","24001","30003"],"details":{"cell":"NHDF-Ad","cell organism":"Human","cell description":"Adult Normal Human Dermal Fibroblasts","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","original_filename":"GSM733744_hg19_wgEncodeBroadHistoneNhdfadCtcfStdSig.bigWig"},"geolst":["GSM733744"]},{"type":"bigWig","name":"Stam HMF CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749675_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13084","24001","30004"],"details":{"cell":"HMF","cell organism":"Human","cell description":"human mammary fibroblasts","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749675_hg19_wgEncodeUwTfbsHmfCtcfStdRawRep2.bigWig"},"geolst":["GSM749675"]},{"type":"bigWig","name":"Stam BJ CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749677_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13075","24001","30004"],"details":{"cell":"BJ","cell organism":"Human","cell description":"skin fibroblast, The line was established from skin taken from normal foreskin. - ATCC.  (PMID: 9916803)","cell karyotype":"normal","cell lineage":"ectoderm","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749677_hg19_wgEncodeUwTfbsBjCtcfStdRawRep1.bigWig"},"geolst":["GSM749677"]},{"type":"bigWig","name":"UW ChipSeq HCT-116 CTCFRep2","url":"http://egg.wustl.edu/d/hg19/GSM1022651_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14005","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"HCT-116","cell organism":"human","cell description":"colorectal carcinoma (PMID: 7214343)","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000950","labexpid":"DS18568","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"2","original_filename":"GSM1022651_hg19_wgEncodeUwTfbsHct116CtcfStdRawRep2.bigWig"},"geolst":["GSM1022651"]},{"type":"bigWig","name":"Stam K562 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749733_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14018","24001","30004"],"details":{"cell":"K562","cell organism":"Human","cell description":"leukemia, The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC","cell karyotype":"cancer","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749733_hg19_wgEncodeUwTfbsK562CtcfStdRawRep2.bigWig"},"geolst":["GSM749733"]},{"type":"bigWig","name":"UT-A ChipSeq MCF-7 estrogen","url":"http://egg.wustl.edu/d/hg19/GSM822309_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14028","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"MCF-7","cell organism":"human","cell description":"mammary gland, adenocarcinoma. (PMID: 4357757)","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"F","treatment":"estrogen","treatment description":"45 min with 100 nM Estradiol (Crawford)","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"MCF-7/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822309_hg19_wgEncodeOpenChromChipMcf7CtcfEstroBaseOverlapSignal.bigWig"},"geolst":["GSM822309"]},{"type":"bigWig","name":"UW ChipSeq MCF-7 CTCFRep2","url":"http://egg.wustl.edu/d/hg19/GSM1022663_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14028","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"MCF-7","cell organism":"human","cell description":"mammary gland, adenocarcinoma. (PMID: 4357757), newly promoted to tier 2: not in 2011 analysis","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000968","labexpid":"DS16199","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"2","original_filename":"GSM1022663_hg19_wgEncodeUwTfbsMcf7CtcfStdRawRep2.bigWig"},"geolst":["GSM1022663"]},{"type":"bigWig","name":"UT-A ChipSeq Fibrobl CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822281_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13061","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"Fibrobl","cell organism":"human","cell description":"Normal child fibroblast, donor sex: female","cell karyotype":"normal","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"Fibrobl/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822281_hg19_wgEncodeOpenChromChipFibroblCtcfBaseOverlapSignal.bigWig"},"geolst":["GSM822281"]},{"type":"bigWig","name":"UT-A ChipSeq Fibrobl CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822281_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13061","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"Fibrobl","cell organism":"human","cell description":"Normal child fibroblast, donor sex: female","cell karyotype":"normal","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"Fibrobl/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822281_hg19_wgEncodeOpenChromChipFibroblCtcfSig.bigWig"},"geolst":["GSM822281"]},{"type":"bigWig","name":"UW ChipSeq WI-38 CTCFRep2","url":"http://egg.wustl.edu/d/hg19/GSM1022634_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13114","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"WI-38","cell organism":"human","cell description":"embryonic lung fibroblast cells, hTERT immortalized, includes Raf1 construct","cell karyotype":"normal","cell lineage":"endoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH001903","labexpid":"DS18348","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"2","original_filename":"GSM1022634_hg19_wgEncodeUwTfbsWi38CtcfStdRawRep2.bigWig"},"geolst":["GSM1022634"]},{"type":"bigWig","name":"UT-A ChipSeq HepG2 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822287_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13048","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"HepG2","cell organism":"human","cell description":"liver carcinoma","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"HepG2/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822287_hg19_wgEncodeOpenChromChipHepg2CtcfSig.bigWig"},"geolst":["GSM822287"]},{"type":"bigWig","name":"UT-A ChipSeq HepG2 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822287_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13048","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"HepG2","cell organism":"human","cell description":"liver carcinoma","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"HepG2/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822287_hg19_wgEncodeOpenChromChipHepg2CtcfBaseOverlapSignal.bigWig"},"geolst":["GSM822287"]},{"type":"bigWig","name":"UT-A ChipSeq HeLa-S3 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822285_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14001","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"HeLa-S3","cell organism":"human","cell description":"cervical carcinoma","cell karyotype":"cancer","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"HeLa-S3/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822285_hg19_wgEncodeOpenChromChipHelas3CtcfBaseOverlapSignal.bigWig"},"geolst":["GSM822285"]},{"type":"bigWig","name":"UT-A ChipSeq HeLa-S3 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822285_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14001","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"HeLa-S3","cell organism":"human","cell description":"cervical carcinoma","cell karyotype":"cancer","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"HeLa-S3/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822285_hg19_wgEncodeOpenChromChipHelas3CtcfSig.bigWig"},"geolst":["GSM822285"]},{"type":"bigWig","name":"UW ChipSeq GM12865 CTCFRep3","url":"http://egg.wustl.edu/d/hg19/GSM1022636_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13094","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12865","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000458","labexpid":"DS13756","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"3","original_filename":"GSM1022636_hg19_wgEncodeUwTfbsGm12865CtcfStdRawRep3.bigWig"},"geolst":["GSM1022636"]},{"type":"bigWig","name":"UW ChipSeq HVMF CTCFRep1","url":"http://egg.wustl.edu/d/hg19/GSM1022630_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13089","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"HVMF","cell organism":"human","cell description":"villous mesenchymal fibroblast cells","cell karyotype":"normal","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000964","labexpid":"DS18571","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"1","original_filename":"GSM1022630_hg19_wgEncodeUwTfbsHvmfCtcfStdRawRep1.bigWig"},"geolst":["GSM1022630"]},{"type":"bigWig","name":"Stam AoAF CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749736_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13074","24001","30004"],"details":{"cell":"AoAF","cell organism":"Human","cell description":"aortic adventitial fibroblast cells","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749736_hg19_wgEncodeUwTfbsAoafCtcfStdRawRep2.bigWig"},"geolst":["GSM749736"]},{"type":"bigWig","name":"UT-A ChipSeq Lung OC","url":"http://egg.wustl.edu/d/hg19/GSM1006882_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13233","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003453","labversion":"baseAlignCounts.pl v 1","replicate":"1","antibody":"CTCF","original_filename":"GSM1006882_hg19_wgEncodeOpenChromChipLungocCtcfSigRep1.bigWig"},"geolst":["GSM1006882"]},{"type":"bigWig","name":"UT-A ChipSeq Lung OC","url":"http://egg.wustl.edu/d/hg19/GSM1006882_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13233","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003453","labversion":"baseAlignCounts.pl v 1","replicate":"1","antibody":"CTCF","original_filename":"GSM1006882_hg19_wgEncodeOpenChromChipLungocCtcfBaseOverlapSignalRep1.bigWig"},"geolst":["GSM1006882"]},{"type":"bigWig","name":"UT-A ChipSeq Kidney OC","url":"http://egg.wustl.edu/d/hg19/GSM1006886_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13226","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003451","labversion":"baseAlignCounts.pl v 1","replicate":"1","antibody":"CTCF","original_filename":"GSM1006886_hg19_wgEncodeOpenChromChipKidneyocCtcfBaseOverlapSignalRep1.bigWig"},"geolst":["GSM1006886"]},{"type":"bigWig","name":"UT-A ChipSeq Spleen OC","url":"http://egg.wustl.edu/d/hg19/GSM1006883_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13234","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003455","labversion":"baseAlignCounts.pl v 1","replicate":"1","antibody":"CTCF","original_filename":"GSM1006883_hg19_wgEncodeOpenChromChipSpleenocCtcfSigRep1.bigWig"},"geolst":["GSM1006883"]},{"type":"bigWig","name":"UT-A ChipSeq LNCaP CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1006874_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14012","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003452","labversion":"baseAlignCounts.pl v 1","replicate":"1","cell sex":"M","antibody":"CTCF","original_filename":"GSM1006874_hg19_wgEncodeOpenChromChipLncapCtcfSigRep1.bigWig"},"geolst":["GSM1006874"]},{"type":"bigWig","name":"UT-A ChipSeq GM19238 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822278_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13065","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM19238","cell organism":"human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, Yoruba in Ibadan, Nigera, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"generic_female","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822278_hg19_wgEncodeOpenChromChipGm19238CtcfSig.bigWig"},"geolst":["GSM822278"]},{"type":"bigWig","name":"UT-A ChipSeq GM19240 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822276_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13067","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM19240","cell organism":"human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, Yoruba in Ibadan, Nigera, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"generic_female","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822276_hg19_wgEncodeOpenChromChipGm19240CtcfSig.bigWig"},"geolst":["GSM822276"]},{"type":"bigWig","name":"UT-A ChipSeq GM19240 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822276_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13067","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM19240","cell organism":"human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, Yoruba in Ibadan, Nigera, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"generic_female","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822276_hg19_wgEncodeOpenChromChipGm19240CtcfBaseOverlapSignal.bigWig"},"geolst":["GSM822276"]},{"type":"bigWig","name":"UW ChipSeq RPTEC CTCFRep2","url":"http://egg.wustl.edu/d/hg19/GSM1022666_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13113","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"RPTEC","cell organism":"human","cell description":"renal proximal tubule epithelial cells","cell karyotype":"normal","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH002045","labexpid":"DS18337","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"2","original_filename":"GSM1022666_hg19_wgEncodeUwTfbsRptecCtcfStdRawRep2.bigWig"},"geolst":["GSM1022666"]},{"type":"bigWig","name":"UT-A ChipSeq GM10266 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1006870_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14045","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003447","labversion":"baseAlignCounts.pl v 1","replicate":"1","cell sex":"M","antibody":"CTCF","original_filename":"GSM1006870_hg19_wgEncodeOpenChromChipGm10266CtcfBaseOverlapSignalRep1.bigWig"},"geolst":["GSM1006870"]},{"type":"bigWig","name":"UT-A ChipSeq GM10266 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1006870_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14045","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003447","labversion":"baseAlignCounts.pl v 1","replicate":"1","cell sex":"M","antibody":"CTCF","original_filename":"GSM1006870_hg19_wgEncodeOpenChromChipGm10266CtcfSigRep1.bigWig"},"geolst":["GSM1006870"]},{"type":"bigWig","name":"UW ChipSeq GM12864 CTCFRep3","url":"http://egg.wustl.edu/d/hg19/GSM1022664_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13093","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12864","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000457","labexpid":"DS14431","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"3","original_filename":"GSM1022664_hg19_wgEncodeUwTfbsGm12864CtcfStdRawRep3.bigWig"},"geolst":["GSM1022664"]},{"type":"bigWig","name":"UT-A ChipSeq NHEK CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822271_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13056","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"NHEK","cell organism":"human","cell description":"epidermal keratinocytes","cell karyotype":"normal","cell lineage":"ectoderm","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"generic_female","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822271_hg19_wgEncodeOpenChromChipNhekCtcfBaseOverlapSignal.bigWig"},"geolst":["GSM822271"]},{"type":"bigWig","name":"UT-A ChipSeq NHEK CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822271_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13056","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"NHEK","cell organism":"human","cell description":"epidermal keratinocytes","cell karyotype":"normal","cell lineage":"ectoderm","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"generic_female","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822271_hg19_wgEncodeOpenChromChipNhekCtcfSig.bigWig"},"geolst":["GSM822271"]},{"type":"bigWig","name":"UW ChipSeq GM12872 CTCFRep3","url":"http://egg.wustl.edu/d/hg19/GSM1022633_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13095","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12872","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000459","labexpid":"DS14432","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"3","original_filename":"GSM1022633_hg19_wgEncodeUwTfbsGm12872CtcfStdRawRep3.bigWig"},"geolst":["GSM1022633"]},{"type":"bigWig","name":"UW ChipSeq HVMF CTCFRep2","url":"http://egg.wustl.edu/d/hg19/GSM1022628_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13089","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"HVMF","cell organism":"human","cell description":"villous mesenchymal fibroblast cells","cell karyotype":"normal","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000964","labexpid":"DS18572","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"2","original_filename":"GSM1022628_hg19_wgEncodeUwTfbsHvmfCtcfStdRawRep2.bigWig"},"geolst":["GSM1022628"]},{"type":"bigWig","name":"Bernstein HUVEC CTCF","url":"http://egg.wustl.edu/d/hg19/GSM733716_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13052","24001","30003"],"details":{"cell":"HUVEC","cell organism":"Human","cell description":"Human Umbilical Vein Endothelial Cell","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","original_filename":"GSM733716_hg19_wgEncodeBroadHistoneHuvecCtcfStdSig.bigWig"},"geolst":["GSM733716"]},{"type":"bigWig","name":"Broad ChipSeq A549 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1003581_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14011","24001","30003"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"A549/EtOH_0.02pct/Input/std","replicate":"1,2","softwareversion":"ScriptureVPaperR3","cell sex":"M","antibody":"CTCF","treatment":"EtOH_0.02pct","treatment description":"1 h with 0.02% Ethanol (Myers)","control":"std","control description":"Standard input signal for most experiments.","labversion":"Illumina_HiSeq_2000","labversion description":"Illumina HiSeq 2000","original_filename":"GSM1003581_hg19_wgEncodeBroadHistoneA549CtcfEtoh02Sig.bigWig"},"geolst":["GSM1003581"]},{"type":"bigWig","name":"UT-A ChipSeq MCF-7 vehicle","url":"http://egg.wustl.edu/d/hg19/GSM822308_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14028","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"MCF-7","cell organism":"human","cell description":"mammary gland, adenocarcinoma. (PMID: 4357757)","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"F","treatment":"vehicle","treatment description":"Charcoal stripped hormone-free FBS for 72 hours (Crawford)","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"MCF-7/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822308_hg19_wgEncodeOpenChromChipMcf7CtcfVehBaseOverlapSignal.bigWig"},"geolst":["GSM822308"]},{"type":"bigWig","name":"Stam SAEC CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749779_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13091","24001","30004"],"details":{"cell":"SAEC","cell organism":"Human","cell description":"Small Airway Epithelial Cells","cell karyotype":"normal","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749779_hg19_wgEncodeUwTfbsSaecCtcfStdRawRep2.bigWig"},"geolst":["GSM749779"]},{"type":"bigWig","name":"UT-A ChipSeq H1-hESC CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822297_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["11101","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"H1-hESC","cell organism":"human","cell description":"embryonic stem cells","cell karyotype":"normal","cell lineage":"inner cell mass","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"generic_male","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822297_hg19_wgEncodeOpenChromChipH1hescCtcfBaseOverlapSignal.bigWig"},"geolst":["GSM822297"]},{"type":"bigWig","name":"UT-A ChipSeq H1-hESC CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822297_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["11101","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"H1-hESC","cell organism":"human","cell description":"embryonic stem cells","cell karyotype":"normal","cell lineage":"inner cell mass","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"generic_male","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822297_hg19_wgEncodeOpenChromChipH1hescCtcfSig.bigWig"},"geolst":["GSM822297"]},{"type":"bigWig","name":"Bernstein GM12878 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM733752_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13047","24001","30003"],"details":{"cell":"GM12878","cell organism":"Human","cell description":"lymphoblastoid","cell karyotype":"relatively normal","cell lineage":"International HapMap Project - CEPH/Utah - European Caucasion","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","original_filename":"GSM733752_hg19_wgEncodeBroadHistoneGm12878CtcfStdSig.bigWig"},"geolst":["GSM733752"]},{"type":"bigWig","name":"UW ChipSeq GM12868 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM849300_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13135","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"ChIP-seq","cell":"GM12868","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed.","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"GM12868/None/Input/std","labexpid":"DS10996","labversion":"Bowtie 0.12.7","replicate":"1","replicate description":"tier 1","original_filename":"GSM849300_hg19_wgEncodeUwTfbsGm12868CtcfStdRawRep2.bigWig"},"geolst":["GSM849300"]},{"type":"bigWig","name":"UW ChipSeq GM12870 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM849302_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13140","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"ChIP-seq","cell":"GM12870","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed.","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"GM12870/None/Input/std","labexpid":"DS10998","labversion":"Bowtie 0.12.7","replicate":"1","replicate description":"tier 1","original_filename":"GSM849302_hg19_wgEncodeUwTfbsGm12870CtcfStdRawRep1.bigWig"},"geolst":["GSM849302"]},{"type":"bigWig","name":"UW ChipSeq GM12870 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM849302_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13140","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"ChIP-seq","cell":"GM12870","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed.","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"GM12870/None/Input/std","labexpid":"DS10998","labversion":"Bowtie 0.12.7","replicate":"1","replicate description":"tier 1","original_filename":"GSM849302_hg19_wgEncodeUwTfbsGm12870CtcfStdRawRep2.bigWig"},"geolst":["GSM849302"]},{"type":"bigWig","name":"UW ChipSeq GM12869 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM849303_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13136","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"ChIP-seq","cell":"GM12869","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed.","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"GM12869/None/Input/std","labexpid":"DS10997","labversion":"Bowtie 0.12.7","replicate":"1","replicate description":"tier 1","original_filename":"GSM849303_hg19_wgEncodeUwTfbsGm12869CtcfStdRawRep1.bigWig"},"geolst":["GSM849303"]},{"type":"bigWig","name":"UW ChipSeq GM12871 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM849304_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13137","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"ChIP-seq","cell":"GM12871","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed.","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"GM12871/None/Input/std","labexpid":"DS10999","labversion":"Bowtie 0.12.7","replicate":"1","replicate description":"tier 1","original_filename":"GSM849304_hg19_wgEncodeUwTfbsGm12871CtcfStdRawRep1.bigWig"},"geolst":["GSM849304"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq ECC-1 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1010774_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14017","24001","30015"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin. Antibody Target: CTCF","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotechnology","antibody vendorid":"sc-5916","controlid":"SL1882","labexpid":"SL3447,SL2630","softwareversion":"MACS","cell sex":"F","antibody":"CTCF_(SC-5916)","treatment":"DMSO_0.02pct","treatment description":"1 h with 0.02% Dimethyl sufloxide (DMSO) (Myers)","protocol":"v041610.2","protocol description":"2x10^7 cells, fragmentation by probe-in sonicator, one 15-cycle round of PCR (Myers)","replicate":"1,2","original_filename":"GSM1010774_hg19_wgEncodeHaibTfbsEcc1CtcfcV0416102Dm002p1hRawRep1.bigWig"},"geolst":["GSM1010774"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq ECC-1 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1010774_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14017","24001","30015"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin. Antibody Target: CTCF","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotechnology","antibody vendorid":"sc-5916","controlid":"SL1882","labexpid":"SL3447,SL2630","softwareversion":"MACS","cell sex":"F","antibody":"CTCF_(SC-5916)","treatment":"DMSO_0.02pct","treatment description":"1 h with 0.02% Dimethyl sufloxide (DMSO) (Myers)","protocol":"v041610.2","protocol description":"2x10^7 cells, fragmentation by probe-in sonicator, one 15-cycle round of PCR (Myers)","replicate":"1,2","original_filename":"GSM1010774_hg19_wgEncodeHaibTfbsEcc1CtcfcV0416102Dm002p1hRawRep2.bigWig"},"geolst":["GSM1010774"]},{"type":"bigWig","name":"Stam HRE CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749727_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13087","24001","30004"],"details":{"cell":"HRE","cell organism":"Human","cell description":"Human Renal Epithelial cells (normal)","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749727_hg19_wgEncodeUwTfbsHreCtcfStdRawRep1.bigWig"},"geolst":["GSM749727"]},{"type":"bigWig","name":"Stam AG09319 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749723_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13072","24001","30004"],"details":{"cell":"AG09319","cell organism":"Human","cell description":"gum tissue fibroblasts from apparently heathly 24 year old","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749723_hg19_wgEncodeUwTfbsAg09319CtcfStdRawRep2.bigWig"},"geolst":["GSM749723"]},{"type":"bigWig","name":"UW ChipSeq HCM CTCFRep1","url":"http://egg.wustl.edu/d/hg19/GSM1022657_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13081","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"HCM","cell organism":"human","cell description":"cardiac myocytes","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000946","labexpid":"DS18566","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"1","original_filename":"GSM1022657_hg19_wgEncodeUwTfbsHcmCtcfStdRawRep1.bigWig"},"geolst":["GSM1022657"]},{"type":"bigWig","name":"Stam AG09319 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749728_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13072","24001","30004"],"details":{"cell":"AG09319","cell organism":"Human","cell description":"gum tissue fibroblasts from apparently heathly 24 year old","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749728_hg19_wgEncodeUwTfbsAg09319CtcfStdRawRep1.bigWig"},"geolst":["GSM749728"]},{"type":"bigWig","name":"UW ChipSeq NHLF CTCFRep1","url":"http://egg.wustl.edu/d/hg19/GSM1022626_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13057","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"NHLF","cell organism":"human","cell description":"lung fibroblasts","cell karyotype":"normal","cell lineage":"endoderm","cell sex":"U","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH002043","labexpid":"DS16349","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"1","original_filename":"GSM1022626_hg19_wgEncodeUwTfbsNhlfCtcfStdRawRep1.bigWig"},"geolst":["GSM1022626"]},{"type":"bigWig","name":"UT-A ChipSeq MCF-7 estrogen","url":"http://egg.wustl.edu/d/hg19/GSM822309_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14028","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"MCF-7","cell organism":"human","cell description":"mammary gland, adenocarcinoma. (PMID: 4357757)","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"F","treatment":"estrogen","treatment description":"45 min with 100 nM Estradiol (Crawford)","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"MCF-7/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822309_hg19_wgEncodeOpenChromChipMcf7CtcfEstroSig.bigWig"},"geolst":["GSM822309"]},{"type":"bigWig","name":"Stam HEEpiC CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749726_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13083","24001","30004"],"details":{"cell":"HEEpiC","cell organism":"Human","cell description":"Human Esophageal Epithelial Cells","cell lineage":"endoderm","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749726_hg19_wgEncodeUwTfbsHeeCtcfStdRawRep2.bigWig"},"geolst":["GSM749726"]},{"type":"bigWig","name":"UW ChipSeq BE2 C","url":"http://egg.wustl.edu/d/hg19/GSM1022650_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14030","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"BE2_C","cell organism":"human","cell description":"neuroblastoma, BE-C is a clone of the SK-N-BE neuroblastoma cell line (see ATCC CRL-2271) that was established in November of 1972 from a bone marrow biopsy taken from a 2-year-old individual with disseminated neuroblastoma after repeated courses of chemotherapy and radiotherapy.","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH001892","labexpid":"DS18308","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"2","original_filename":"GSM1022650_hg19_wgEncodeUwTfbsBe2cCtcfStdRawRep2.bigWig"},"geolst":["GSM1022650"]},{"type":"bigWig","name":"Bernstein H1-hESC CTCF","url":"http://egg.wustl.edu/d/hg19/GSM733672_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["11101","24001","30003"],"details":{"cell":"H1-hESC","cell organism":"Human","cell description":"Human Embryonic Stem Cells","cell karyotype":"normal","cell lineage":"embryonic stem cells","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","original_filename":"GSM733672_hg19_wgEncodeBroadHistoneH1hescCtcfStdSig.bigWig"},"geolst":["GSM733672"]},{"type":"bigWig","name":"UW ChipSeq GM12866 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM849305_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13138","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"ChIP-seq","cell":"GM12866","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed.","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"GM12866/None/Input/std","labexpid":"DS10994","labversion":"Bowtie 0.12.7","replicate":"1","replicate description":"tier 1","original_filename":"GSM849305_hg19_wgEncodeUwTfbsGm12866CtcfStdRawRep2.bigWig"},"geolst":["GSM849305"]},{"type":"bigWig","name":"Stam GM12873 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749686_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13096","24001","30004"],"details":{"cell":"GM12873","cell organism":"Human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749686_hg19_wgEncodeUwTfbsGm12873CtcfStdRawRep2.bigWig"},"geolst":["GSM749686"]},{"type":"bigWig","name":"Stam AG09309 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749680_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13071","24001","30004"],"details":{"cell":"AG09309","cell organism":"Human","cell description":"adult toe fibroblast from apparently healthy 21 year old","cell karyotype":"7% of the cells examined showing random chromosome loss/gain -Coriell","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749680_hg19_wgEncodeUwTfbsAg09309CtcfStdRawRep2.bigWig"},"geolst":["GSM749680"]},{"type":"bigWig","name":"UW ChipSeq GM12873 CTCFRep3","url":"http://egg.wustl.edu/d/hg19/GSM1022629_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13096","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12873","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000460","labexpid":"DS14433","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"3","original_filename":"GSM1022629_hg19_wgEncodeUwTfbsGm12873CtcfStdRawRep3.bigWig"},"geolst":["GSM1022629"]},{"type":"bigWig","name":"Stam SAEC CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749684_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13091","24001","30004"],"details":{"cell":"SAEC","cell organism":"Human","cell description":"Small Airway Epithelial Cells","cell karyotype":"normal","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749684_hg19_wgEncodeUwTfbsSaecCtcfStdRawRep1.bigWig"},"geolst":["GSM749684"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq SK-N-SH RA","url":"http://egg.wustl.edu/d/hg19/GSM803333_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14009","24001","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"SK-N-SH_RA","cell organism":"human","cell description":"neuroblastoma cell line, treatment: differentiated with retinoic acid. (Biedler, et al. Morphology and Growth, Tumorigenicity, and Cytogenetics of Human Neuroblastoma Cells in Continuous Culture. Cancer Research 33, 2643-2652, November 1973.)","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v041610.2","protocol description":"2x10^7 cells, fragmentation by probe-in sonicator, one 15-cycle round of PCR (Myers)","controlid":"SL2905","labexpid":"SL2906","replicate":"1","replicate description":"tier 1","original_filename":"GSM803333_hg19_wgEncodeHaibTfbsSknshraCtcfV0416102RawRep2.bigWig"},"geolst":["GSM803333"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq SK-N-SH RA","url":"http://egg.wustl.edu/d/hg19/GSM803333_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14009","24001","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"SK-N-SH_RA","cell organism":"human","cell description":"neuroblastoma cell line, treatment: differentiated with retinoic acid. (Biedler, et al. Morphology and Growth, Tumorigenicity, and Cytogenetics of Human Neuroblastoma Cells in Continuous Culture. Cancer Research 33, 2643-2652, November 1973.)","cell karyotype":"cancer","cell lineage":"ectoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v041610.2","protocol description":"2x10^7 cells, fragmentation by probe-in sonicator, one 15-cycle round of PCR (Myers)","controlid":"SL2905","labexpid":"SL2906","replicate":"1","replicate description":"tier 1","original_filename":"GSM803333_hg19_wgEncodeHaibTfbsSknshraCtcfV0416102RawRep1.bigWig"},"geolst":["GSM803333"]},{"type":"bigWig","name":"UW ChipSeq HFF-Myc CTCFRep2","url":"http://egg.wustl.edu/d/hg19/GSM1022669_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13104","24001","30004"],"details":{"lab":"UW","lab description":"Stamatoyannopoulous - University of Washington","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"HFF-Myc","cell organism":"human","cell description":"foreskin fibroblast cells expressing canine cMyc","cell karyotype":"normal","cell lineage":"fibroblast","cell sex":"M","antibody":"CTCF","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH001896","labexpid":"DS18323","labversion":"Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75","replicate":"2","original_filename":"GSM1022669_hg19_wgEncodeUwTfbsHffmycCtcfStdRawRep2.bigWig"},"geolst":["GSM1022669"]},{"type":"bigWig","name":"UT-A ChipSeq GM13977 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1006869_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14046","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003444","labversion":"baseAlignCounts.pl v 1","replicate":"1","cell sex":"F","antibody":"CTCF","original_filename":"GSM1006869_hg19_wgEncodeOpenChromChipGm13977CtcfSigRep1.bigWig"},"geolst":["GSM1006869"]},{"type":"bigWig","name":"Stam AG04450 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749769_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["12011","24001","30004"],"details":{"cell":"AG04450","cell organism":"Human","cell description":"fetal lung fibroblast","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749769_hg19_wgEncodeUwTfbsAg04450CtcfStdRawRep1.bigWig"},"geolst":["GSM749769"]},{"type":"bigWig","name":"Stanford ChipSeq IMR90 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM935404_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["11310","24001","30018"],"details":{"lab":"Stanford","lab description":"Snyder - Stanford University","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"IMR90","cell organism":"human","cell description":"fetal lung fibroblasts, newly promoted to tier 2: not in 2011 analysis","cell karyotype":"normal","cell lineage":"endoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"CTCF_(SC-15914)","antibody antibodydescription":"Goat polyclonal, epitope mapping near the C-terminus of CTCF of human origin. Antibody Target: CTCF","antibody targetdescription":"Transcriptional regulator with 11 highly conserved zinc finger domains. Depending on context, can bind a histone acetyltransferase (HAT)-containing complex and function as transcriptional activator or bind a histone deacetylase (HDAC)-containing complex and function as transcriptional repressor. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation. Can dimerize, mediating long-range chromatin looping. When bound to chromatin, provides an anchor point for nucleosomes positioning. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites.","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-15914","control":"IgG-rab","control description":"Input signal from Normal Rabbit IgG ChIP-seq.","controlid":"wgEncodeEH002808","replicate":"1","original_filename":"GSM935404_hg19_wgEncodeSydhTfbsImr90CtcfbIggrabSig.bigWig"},"geolst":["GSM935404"]},{"type":"bigWig","name":"Bernstein HMEC CTCF","url":"http://egg.wustl.edu/d/hg19/GSM733724_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13049","24001","30003"],"details":{"cell":"HMEC","cell organism":"Human","cell description":"Human Mammary Epithelial Cells","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","original_filename":"GSM733724_hg19_wgEncodeBroadHistoneHmecCtcfStdSig.bigWig"},"geolst":["GSM733724"]},{"type":"bigWig","name":"UT-A ChipSeq Pancreas OC","url":"http://egg.wustl.edu/d/hg19/GSM1006881_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13227","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003454","labversion":"baseAlignCounts.pl v 1","replicate":"1","antibody":"CTCF","original_filename":"GSM1006881_hg19_wgEncodeOpenChromChipPancreasocCtcfSigRep1.bigWig"},"geolst":["GSM1006881"]},{"type":"bigWig","name":"Stam HEEpiC CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749712_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13083","24001","30004"],"details":{"cell":"HEEpiC","cell organism":"Human","cell description":"Human Esophageal Epithelial Cells","cell lineage":"endoderm","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749712_hg19_wgEncodeUwTfbsHeeCtcfStdRawRep1.bigWig"},"geolst":["GSM749712"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq MCF-7 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1010734_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14028","24001","30015"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin. Antibody Target: CTCF","antibody targetdescription":"This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotechnology","antibody vendorid":"sc-5916","controlid":"SL16757,SL13504","labexpid":"SL13463,SL16333","softwareversion":"MACS","cell sex":"F","antibody":"CTCF_(SC-5916)","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v042211.1","protocol description":"Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)","replicate":"1,2","original_filename":"GSM1010734_hg19_wgEncodeHaibTfbsMcf7CtcfcV0422111RawRep2.bigWig"},"geolst":["GSM1010734"]},{"type":"bigWig","name":"Stam HepG2 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749715_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13048","24001","30004"],"details":{"cell":"HepG2","cell organism":"Human","cell description":"liver carcinoma","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749715_hg19_wgEncodeUwTfbsHepg2CtcfStdRawRep1.bigWig"},"geolst":["GSM749715"]},{"type":"bigWig","name":"Stam GM12874 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749757_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13097","24001","30004"],"details":{"cell":"GM12874","cell organism":"Human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749757_hg19_wgEncodeUwTfbsGm12874CtcfStdRawRep1.bigWig"},"geolst":["GSM749757"]},{"type":"bigWig","name":"Stanford ChipSeq K562 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM935407_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14018","24001","30018"],"details":{"lab":"Stanford","lab description":"Snyder - Stanford University","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"K562","cell organism":"human","cell description":"leukemia, The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC","cell karyotype":"cancer","cell lineage":"mesoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"CTCF_(SC-15914)","antibody antibodydescription":"Goat polyclonal, epitope mapping near the C-terminus of CTCF of human origin. Antibody Target: CTCF","antibody targetdescription":"Transcriptional regulator with 11 highly conserved zinc finger domains. Depending on context, can bind a histone acetyltransferase (HAT)-containing complex and function as transcriptional activator or bind a histone deacetylase (HDAC)-containing complex and function as transcriptional repressor. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation. Can dimerize, mediating long-range chromatin looping. When bound to chromatin, provides an anchor point for nucleosomes positioning. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites.","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-15914","control":"IgG-rab","control description":"Input signal from Normal Rabbit IgG ChIP-seq.","controlid":"wgEncodeEH001795","replicate":"1","original_filename":"GSM935407_hg19_wgEncodeSydhTfbsK562CtcfbIggrabSig.bigWig"},"geolst":["GSM935407"]},{"type":"bigWig","name":"Stam GM12801 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749711_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13092","24001","30004"],"details":{"cell":"GM12801","cell organism":"Human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749711_hg19_wgEncodeUwTfbsGm12801CtcfStdRawRep1.bigWig"},"geolst":["GSM749711"]},{"type":"bigWig","name":"Stam HPF CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749717_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13086","24001","30004"],"details":{"cell":"HPF","cell organism":"Human","cell description":"Human Pulmonary Fibroblasts isolated from lung tissue","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749717_hg19_wgEncodeUwTfbsHpfCtcfStdRawRep2.bigWig"},"geolst":["GSM749717"]},{"type":"bigWig","name":"Bernstein Osteobl CTCF","url":"http://egg.wustl.edu/d/hg19/GSM733784_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13058","24001","30003"],"details":{"cell":"Osteobl","cell organism":"Human","cell description":"Normal human osteoblasts (NHOst)","cell karyotype":"normal","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","original_filename":"GSM733784_hg19_wgEncodeBroadHistoneOsteoblCtcfStdSig.bigWig"},"geolst":["GSM733784"]},{"type":"bigWig","name":"Stam AG09309 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749750_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13071","24001","30004"],"details":{"cell":"AG09309","cell organism":"Human","cell description":"adult toe fibroblast from apparently healthy 21 year old","cell karyotype":"7% of the cells examined showing random chromosome loss/gain -Coriell","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749750_hg19_wgEncodeUwTfbsAg09309CtcfStdRawRep1.bigWig"},"geolst":["GSM749750"]},{"type":"bigWig","name":"UT-A ChipSeq K562 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822311_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14018","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"K562","cell organism":"human","cell description":"leukemia, The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC","cell karyotype":"cancer","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"K562/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822311_hg19_wgEncodeOpenChromChipK562CtcfSig.bigWig"},"geolst":["GSM822311"]},{"type":"bigWig","name":"UT-A ChipSeq K562 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM822311_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14018","24001","30009"],"details":{"lab":"UT-A","lab description":"Iyer - University of Texas at Austin","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"K562","cell organism":"human","cell description":"leukemia, The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC","cell karyotype":"cancer","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"K562/Input","labversion":"align_on_cluster_bwa.pl v 1","replicate":"1","replicate description":"tier 1","original_filename":"GSM822311_hg19_wgEncodeOpenChromChipK562CtcfBaseOverlapSignal.bigWig"},"geolst":["GSM822311"]},{"type":"bigWig","name":"UT-A ChipSeq Medullo CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1006893_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14020","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003441","labversion":"baseAlignCounts.pl v 1","replicate":"1,2","cell sex":"U","antibody":"CTCF","original_filename":"GSM1006893_hg19_wgEncodeOpenChromChipMedulloCtcfSig.bigWig"},"geolst":["GSM1006893"]},{"type":"bigWig","name":"Stam AoAF CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749666_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13074","24001","30004"],"details":{"cell":"AoAF","cell organism":"Human","cell description":"aortic adventitial fibroblast cells","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749666_hg19_wgEncodeUwTfbsAoafCtcfStdRawRep1.bigWig"},"geolst":["GSM749666"]},{"type":"bigWig","name":"Stam HA-sp CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749696_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13077","24001","30004"],"details":{"cell":"HA-sp","cell organism":"Human","cell description":"Human astrocytes spinal cord","cell karyotype":"normal","cell lineage":"Astrocytic","cell sex":"U","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749696_hg19_wgEncodeUwTfbsHaspCtcfStdRawRep1.bigWig"},"geolst":["GSM749696"]},{"type":"bigWig","name":"Stam GM12872 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749694_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13095","24001","30004"],"details":{"cell":"GM12872","cell organism":"Human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749694_hg19_wgEncodeUwTfbsGm12872CtcfStdRawRep1.bigWig"},"geolst":["GSM749694"]},{"type":"bigWig","name":"Stam GM12872 CTCF 2","url":"http://egg.wustl.edu/d/hg19/GSM749692_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13095","24001","30004"],"details":{"cell":"GM12872","cell organism":"Human","cell description":"B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, Treatment: Epstein-Barr Virus transformed","cell karyotype":"unknown","cell lineage":"mesoderm","cell sex":"M","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"2","original_filename":"GSM749692_hg19_wgEncodeUwTfbsGm12872CtcfStdRawRep2.bigWig"},"geolst":["GSM749692"]},{"type":"bigWig","name":"Stam K562 CTCF 1","url":"http://egg.wustl.edu/d/hg19/GSM749690_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["14018","24001","30004"],"details":{"cell":"K562","cell organism":"Human","cell description":"leukemia, The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC","cell karyotype":"cancer","cell lineage":"mesoderm","cell sex":"F","antibody":"CTCF","antibody description":"rabbit polyclonal","antibody target description":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendor name":"Millipore","replicate":"1","original_filename":"GSM749690_hg19_wgEncodeUwTfbsK562CtcfStdRawRep1.bigWig"},"geolst":["GSM749690"]},{"type":"bigWig","name":"UT-A ChipSeq Kidney OC","url":"http://egg.wustl.edu/d/hg19/GSM1006886_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13226","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003451","labversion":"baseAlignCounts.pl v 1","replicate":"1","antibody":"CTCF","original_filename":"GSM1006886_hg19_wgEncodeOpenChromChipKidneyocCtcfSigRep1.bigWig"},"geolst":["GSM1006886"]},{"type":"bigWig","name":"UT-A ChipSeq GM10248 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1006891_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13279","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003442","labversion":"baseAlignCounts.pl v 1","replicate":"1","cell sex":"M","antibody":"CTCF","original_filename":"GSM1006891_hg19_wgEncodeOpenChromChipGm10248CtcfSigRep1.bigWig"},"geolst":["GSM1006891"]},{"type":"bigWig","name":"UT-A ChipSeq GM10248 CTCF","url":"http://egg.wustl.edu/d/hg19/GSM1006891_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"annotation":["13279","24001","30009"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"rabbit polyclonal. Antibody Target: CTCF","antibody targetdescription":"CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.","antibody vendorname":"Millipore","antibody vendorid":"07-729","controlid":"wgEncodeEH003442","labversion":"baseAlignCounts.pl v 1","replicate":"1","cell sex":"M","antibody":"CTCF","original_filename":"GSM1006891_hg19_wgEncodeOpenChromChipGm10248CtcfBaseOverlapSignalRep1.bigWig"},"geolst":["GSM1006891"]},{"type":"native_track","list":[{"name":"refGene","mode":3,"qtc":{"anglescale":1,"pr":0,"pg":77,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"rgb(0,0,0)","fontsize":"8pt","fontfamily":"arial","fontbold":true,"bedcolor":"rgb(0,77,153)","bg":"rgb(255,255,255)"}}]},{"type":"interaction","name":"4C_MM011_sox9_2.minMQ4.sorted.EB.txt","url":"http://epigenomegateway.wustl.edu/browser/t/90008107.txt.gz","mode":"hide","qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":0,"pg":0,"pb":255,"nr":0,"ng":99,"nb":133,"pcolorscore":4314,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50}},{"type":"interaction","name":"4C_MM047_sox9_2.minMQ4.sorted.EB.txt","url":"http://epigenomegateway.wustl.edu/browser/t/1512631608.txt.gz","mode":"hide","qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":255,"pg":0,"pb":0,"nr":0,"ng":99,"nb":133,"pcolorscore":3886,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50,"bg":"rgb(227,227,227)"}},{"type":"interaction","name":"4C_MM047_peak1.minMQ4.sorted.EB.txt","url":"http://epigenomegateway.wustl.edu/browser/t/432841302.txt.gz","mode":"hide","qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":255,"pg":0,"pb":0,"nr":0,"ng":99,"nb":133,"pcolorscore":6434,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50,"bg":"rgb(227,227,227)"}},{"type":"interaction","name":"4C_MM011_peak1.minMQ4.sorted.EB.txt","url":"http://epigenomegateway.wustl.edu/browser/t/77730387.txt.gz","mode":"hide","qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":0,"pg":0,"pb":255,"nr":0,"ng":99,"nb":133,"pcolorscore":202.957,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50,"bg":"rgb(222, 222, 222)"}},{"type":"interaction","name":"cor_expressionVsH3K27ac_SOX9space.2coordinates.epig.txt","url":"http://epigenomegateway.wustl.edu/browser/t/1708358561.txt.gz","mode":"hide","qtc":{"pfilterscore":0,"nfilterscore":0,"pcolorscore":0.98,"ncolorscore":-0.909090909090909,"thtype":1}},{"type":"coordinate_override","coord":"chr17,68509253,chr17,71881317"},{"type":"native_metadata_terms","list":["Assay","Sample"]}]