[{"type":"bigWig","name":"ES4h_20o2_WGBS","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/ES4h_20o2_WGBS.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bigWig","name":"H3K4me1 of H1","url":"http://egg.wustl.edu/d/hg19/GSM605312.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":133,"pb":66,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["11101","22010","30002"],"details":{"molecule":"genomic DNA"," disease":"None","biomaterial_provider":"James Thompson Laboratory","biomaterial_type":"Cell Line","line":"H1","lineage":"Embryonic Stem Cell","differentiation_stage":"None","differentiation_method":"None","passage":"27","medium":"mTeSER","Sex":"Male","batch":"H1Jp27(16)","experiment_type":"Histone H3K4me1","extraction_protocol":"See","extraction_protocol_type_of_sonicator":"Biorupter","extraction_protocol_sonication_cycles":"80","chip_protocol":"See","chip_protocol_chromatin_amount":"500 micrograms","chip_protocol_bead_type":"magnetic anti-rabbit","chip_protocol_bead_amount":"33,500,000","chip_protocol_antibody_amount":"5 micrograms","chip_antibody":"H3K4me1","chip_antibody_provider":"Abcam","chip_antibody_catalog":"ab8895","chip_antibody_lot":"720417","original_filename":"GSM605312_UCSD.H1.H3K4me1.YL131.bigWig","Embargo end date":"2011-07-07"},"geolst":["GSM605312"]},{"type":"bigWig","name":"H3K27ac of H1","url":"http://egg.wustl.edu/d/hg19/GSM663427.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":150,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["11101","22019","30002"],"details":{"molecule":"genomic DNA"," disease":"None","biomaterial_provider":"James Thompson Laboratory","biomaterial_type":"Cell Line","line":"H1","lineage":"Embryonic Stem Cell","differentiation_stage":"None","differentiation_method":"None","passage":"26","medium":"mTeSER","Sex":"Male","batch":"H1J5p26","experiment_type":"Histone H3K27ac","extraction_protocol":"See","extraction_protocol_type_of_sonicator":"Biorupter","extraction_protocol_sonication_cycles":"80","chip_protocol":"See","chip_protocol_chromatin_amount":"250 micrograms","chip_protocol_bead_type":"magnetic anti-rabbit","chip_protocol_bead_amount":"33,500,000","chip_protocol_antibody_amount":"5 micrograms","chip_antibody":"H3K27ac","chip_antibody_provider":"Active Motif","chip_antibody_catalog":"AM 39133","chip_antibody_lot":"19208002","original_filename":"GSM663427_UCSD.H1.H3K27ac.SAK270.bigWig","Embargo end date":"2011-12-23"},"geolst":["GSM663427"]},{"type":"bigWig","name":"MidFrontal_Cortex_GSM1204460","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/MidFrontal_Cortex_GSM1204460.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bigWig","name":"GerminalMatrix_GSM941747_WGBS","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/GerminalMatrix_GSM941747_WGBS.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bigWig","name":"MidFrontal_Cortex_GSM1204459","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/MidFrontal_Cortex_GSM1204459.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bigWig","name":"H3K4me1 of fetal brain","url":"http://egg.wustl.edu/d/hg19/GSM706850_0.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":133,"pb":66,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["12003","22010","30003","40180","60003","70009"],"details":{"sample_alias":"BioSAli 186","sample_common_name":"Fetal Brain","collection_method":"Post-Mortem","donor_health_status":"presumed normal","molecule":"genomic DNA","disease":"presumed normal","tissue_type":"Fetal Brain","donor_ethnicity":"NA","donor_sex":"Unknown","biomaterial_type":"Primary Tissue","tissue_depot":"Brain","donor_id":"UW H22676","biomaterial_provider":"University of Washington","donor_age":"120.0 Days","chip_protocol_bead_type":"Protein A-Sepharose 4B","chip_antibody":"H3K4me1","chip_protocol_chromatin_amount":"10 million cells","extraction_protocol":"SDS lysis","chip_protocol_antibody_amount":"2-15 ug","chip_protocol_bead_amount":"70 ul bed volume","chip_protocol":"Bernstein_BROAD_ENCODE_protocol","extraction_protocol_sonication_cycles":"1","chip_antibody_catalog":"ab8895","chip_antibody_provider":"Abcam","chip_antibody_lot":"659352","experiment_type":"Histone H3K4me1","extraction_protocol_type_of_sonicator":"Bioruptor","original_filename":"GSM706850_BI.Fetal_Brain.H3K4me1.UW_H22676.bigWig"},"geolst":["GSM706850"]},{"type":"bigWig","name":"H3K27ac of Brain Cingulate Gyrus","url":"http://egg.wustl.edu/d/hg19/GSM773011.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":150,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13041","22019","30003","40179","60001","70009"],"details":{"sample_alias":"394","sample_common_name":"Brain, Cingulate Gyrus","collection_method":"Post-Mortem","donor_health_status":"no AD evident at demise","molecule":"genomic DNA","disease":"no AD evident at demise","tissue_type":"Cingulate Gyrus","donor_ethnicity":"NA","donor_sex":"Male","biomaterial_type":"Primary Tissue","tissue_depot":"Brain","donor_id":"149","biomaterial_provider":"Rush University Medical Center","donor_age":"81.0 Years","chip_protocol_bead_type":"Protein A-Sepharose 4B","chip_antibody":"H3K27ac","chip_protocol_chromatin_amount":"0.5 to 3 million cells","extraction_protocol":"cell/nuclei lysis","chip_protocol_antibody_amount":"~1 ug","chip_protocol_bead_amount":"10 ul bed volume","chip_protocol":"Bernstein_BROAD_ENCODE_protocol","extraction_protocol_sonication_cycles":"1","chip_antibody_catalog":"ab4729","chip_antibody_provider":"Abcam","chip_antibody_lot":"509313","experiment_type":"Histone H3K27ac","extraction_protocol_type_of_sonicator":"Branson"},"geolst":["GSM773011"]},{"type":"bigWig","name":"H3K27ac of Brain Hippocampus Middle","url":"http://egg.wustl.edu/d/hg19/GSM916035.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":150,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13042","22019","30003","40162","60001","70009"],"details":{"sample_alias":"223","sample_common_name":"Brain, Hippocampus Middle","collection_method":"Post-Mortem","donor_health_status":"no AD present","molecule":"genomic DNA","disease":"no AD present","tissue_type":"Hippocampus Middle","donor_ethnicity":"NA","donor_sex":"Male","biomaterial_type":"Primary Tissue","tissue_depot":"Brain","donor_id":"150","biomaterial_provider":"Rush University Medical Center","donor_age":"73.0 Years","chip_protocol_bead_type":"Protein A-Sepharose 4B","chip_antibody":"H3K27ac","chip_protocol_chromatin_amount":"0.5 to 3 million cells","extraction_protocol":"cell/nuclei lysis","chip_protocol_antibody_amount":"~1 ug","chip_protocol_bead_amount":"10 ul bed volume","chip_protocol":"Bernstein_BROAD_ENCODE_protocol","extraction_protocol_sonication_cycles":"1","chip_antibody_catalog":"39133","chip_antibody_provider":"Active Motif","chip_antibody_lot":"31610003","experiment_type":"Histone H3K27ac","extraction_protocol_type_of_sonicator":"Branson"},"geolst":["GSM916035"]},{"type":"bigWig","name":"H3K27ac of Brain  Hippocampus Middle","url":"http://egg.wustl.edu/d/hg19/GSM773020_0.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":150,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13042","22019","30003","40179","60001","70009"],"details":{"sample_alias":"216","sample_common_name":"Brain, Hippocampus Middle","collection_method":"Post-Mortem","donor_health_status":"no AD evident at demise","molecule":"genomic DNA","disease":"no AD evident at demise","tissue_type":"Hippocampus Middle","donor_ethnicity":"NA","donor_sex":"Male","biomaterial_type":"Primary Tissue","tissue_depot":"Brain","donor_id":"149","biomaterial_provider":"Rush University Medical Center","donor_age":"81.0 Years","chip_protocol_bead_type":"Protein A-Sepharose 4B","chip_antibody":"H3K27ac","chip_protocol_chromatin_amount":"0.5 to 3 million cells","extraction_protocol":"cell/nuclei lysis","chip_protocol_antibody_amount":"~1 ug","chip_protocol_bead_amount":"10 ul bed volume","chip_protocol":"Bernstein_BROAD_ENCODE_protocol","extraction_protocol_sonication_cycles":"1","chip_antibody_catalog":"ab4729","chip_antibody_provider":"Abcam","chip_antibody_lot":"509313","experiment_type":"Histone H3K27ac","extraction_protocol_type_of_sonicator":"Branson","original_filename":"GSM773020_BI.Brain_Hippocampus_Middle.H3K27ac.149"},"geolst":["GSM773020"]},{"type":"bigWig","name":"H3K27ac of Brain  Inferior Temporal Lobe","url":"http://egg.wustl.edu/d/hg19/GSM772995_0.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":150,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13043","22019","30003","40179","60001","70009"],"details":{"sample_alias":"220","sample_common_name":"Brain, Inferior Temporal Lobe","collection_method":"Post-Mortem","donor_health_status":"no AD evident at demise","molecule":"genomic DNA","disease":"no AD evident at demise","tissue_type":"Inferior Temporal Lobe","donor_ethnicity":"NA","donor_sex":"Male","biomaterial_type":"Primary Tissue","tissue_depot":"Brain","donor_id":"149","biomaterial_provider":"Rush University Medical Center","donor_age":"81.0 Years","chip_protocol_bead_type":"Protein A-Sepharose 4B","chip_antibody":"H3K27ac","chip_protocol_chromatin_amount":"0.5 to 3 million cells","extraction_protocol":"cell/nuclei lysis","chip_protocol_antibody_amount":"~1 ug","chip_protocol_bead_amount":"10 ul bed volume","chip_protocol":"Bernstein_BROAD_ENCODE_protocol","extraction_protocol_sonication_cycles":"1","chip_antibody_catalog":"ab4729","chip_antibody_provider":"Abcam","chip_antibody_lot":"509313","experiment_type":"Histone H3K27ac","extraction_protocol_type_of_sonicator":"Branson","original_filename":"GSM772995_BI.Brain_Inferior_Temporal_Lobe.H3K27ac.149"},"geolst":["GSM772995"]},{"type":"bigWig","name":"H3K27ac of Brain Angular Gyrus","url":"http://egg.wustl.edu/d/hg19/GSM773016_0.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":150,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13160","22019","30003","40179","60001","70009"],"details":{"sample_alias":"221","sample_common_name":"Brain, Angular Gyrus","collection_method":"Post-Mortem","donor_health_status":"no AD evident at demise","molecule":"genomic DNA","disease":"no AD evident at demise","tissue_type":"Angular gyrus","donor_ethnicity":"NA","donor_sex":"Male","biomaterial_type":"Primary Tissue","tissue_depot":"Brain","donor_id":"149","biomaterial_provider":"Rush University Medical Center","donor_age":"81.0 Years","chip_protocol_bead_type":"Protein A-Sepharose 4B","chip_antibody":"H3K27ac","chip_protocol_chromatin_amount":"0.5 to 3 million cells","extraction_protocol":"cell/nuclei lysis","chip_protocol_antibody_amount":"~1 ug","chip_protocol_bead_amount":"10 ul bed volume","chip_protocol":"Bernstein_BROAD_ENCODE_protocol","extraction_protocol_sonication_cycles":"1","chip_antibody_catalog":"ab4729","chip_antibody_provider":"Abcam","chip_antibody_lot":"509313","experiment_type":"Histone H3K27ac","extraction_protocol_type_of_sonicator":"Branson","original_filename":"GSM773016_BI.Brain_Angular_Gyrus.H3K27ac.149"},"geolst":["GSM773016"]},{"type":"bigWig","name":"H3K27ac of Brain Mid Frontal Lobe","url":"http://egg.wustl.edu/d/hg19/GSM773015.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":150,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13044","22019","30003","40179","60001","70009"],"details":{"sample_alias":"218","sample_common_name":"Brain, Mid Frontal Lobe","collection_method":"Post-Mortem","donor_health_status":"no AD evident at demise","molecule":"genomic DNA","disease":"no AD evident at demise","tissue_type":"Mid Frontal Lobe","donor_ethnicity":"NA","donor_sex":"Male","biomaterial_type":"Primary Tissue","tissue_depot":"Brain","donor_id":"149","biomaterial_provider":"Rush University Medical Center","donor_age":"81.0 Years","chip_protocol_bead_type":"Protein A-Sepharose 4B","chip_antibody":"H3K27ac","chip_protocol_chromatin_amount":"0.5 to 3 million cells","extraction_protocol":"cell/nuclei lysis","chip_protocol_antibody_amount":"~1 ug","chip_protocol_bead_amount":"10 ul bed volume","chip_protocol":"Bernstein_BROAD_ENCODE_protocol","extraction_protocol_sonication_cycles":"1","chip_antibody_catalog":"ab4729","chip_antibody_provider":"Abcam","chip_antibody_lot":"509313","experiment_type":"Histone H3K27ac","extraction_protocol_type_of_sonicator":"Branson"},"geolst":["GSM773015"]},{"type":"bigWig","name":"H3K4me1 of Brain Germinal Matrix","url":"http://egg.wustl.edu/d/hg19/GSM806939_0.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":133,"pb":66,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13155","22010","30014","40137","60001","70009"],"details":{"sample_alias":"Brain Germinal Matrix HuFGM02","sample_common_name":"Brain, Germinal Matrix","molecule":"genomic DNA","disease":"None","biomaterial_provider":"Costello Lab UCSF","biomaterial_type":"Primary Tissue","tissue_type":"Brain-Germinal Matrix","tissue_depot":"NA","collection_method":"NA","donor_id":"HuFGM02","donor_age":"20GW","donor_health_status":"Disease Free","donor_sex":"Male","donor_ethnicity":"NA","experiment_type":"Histone H3K4me1","extraction_protocol":"BCCAGSC ChIP Standard Operating Procedure","extraction_protocol_type_of_sonicator":"Fisher 550 Sonic Dismembrator","extraction_protocol_sonication_cycles":"10min","chip_protocol":"BCCAGSC ChIP Standard Operating Procedure","chip_protocol_chromatin_amount":"10ug","chip_protocol_bead_type":"Sepharose A/G beads","chip_protocol_bead_amount":"20ul","chip_protocol_antibody_amount":"5ug","size_fraction":"101-311bp","chip_antibody":"H3K4me1","chip_antibody_provider":"diagenode","chip_antibody_catalog":"pAb037050","chip_antibody_lot":"A399002341P","original_filename":"GSM806939_UCSF-UBC.Brain_Germinal_Matrix.H3K4me1.HuFGM02.bigWig"},"geolst":["GSM806939"]},{"type":"bigWig","name":"H3K4me1 of Brain Hippocampus Middle","url":"http://egg.wustl.edu/d/hg19/GSM916039.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":133,"pb":66,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13042","22010","30003","40162","60001","70009"],"details":{"sample_alias":"223","sample_common_name":"Brain, Hippocampus Middle","collection_method":"Post-Mortem","donor_health_status":"no AD present","molecule":"genomic DNA","disease":"no AD present","tissue_type":"Hippocampus Middle","donor_ethnicity":"NA","donor_sex":"Male","biomaterial_type":"Primary Tissue","tissue_depot":"Brain","donor_id":"150","biomaterial_provider":"Rush University Medical Center","donor_age":"73.0 Years","chip_protocol_bead_type":"Protein A-Sepharose 4B","chip_antibody":"H3K4me1","chip_protocol_chromatin_amount":"0.5 to 3 million cells","extraction_protocol":"cell/nuclei lysis","chip_protocol_antibody_amount":"~1 ug","chip_protocol_bead_amount":"10 ul bed volume","chip_protocol":"Bernstein_BROAD_ENCODE_protocol","extraction_protocol_sonication_cycles":"1","chip_antibody_catalog":"ab8895","chip_antibody_provider":"Abcam","chip_antibody_lot":"659352","experiment_type":"Histone H3K4me1","extraction_protocol_type_of_sonicator":"Branson"},"geolst":["GSM916039"]},{"type":"bigWig","name":"H3K4me1 of Brain  Mid Frontal Lobe","url":"http://egg.wustl.edu/d/hg19/GSM670015.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":133,"pb":66,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13044","22010","30003","40011","60002","70009"],"details":{"sample_alias":"174"," sample_common_name":"Brain, Mid Frontal Lobe","collection_method":"post-mortem","donor_health_status":"NA","molecule":"genomic DNA","disease":"none","tissue_type":"Mid Frontal Lobe","passage_if_expanded":"NA","donor_ethnicity":"NA","donor_sex":"Female","biomaterial_type":"Primary Tissue","tissue_depot":"brain","donor_id":"112","biomaterial_provider":"Rush University Medical Center","donor_age":"75","chip_protocol_bead_type":"Protein A-Sepharose 4B","chip_antibody":"H3K4Me1","chip_protocol_chromatin_amount":"10 million cells","extraction_protocol":"SDS lysis","chip_protocol_antibody_amount":"2-15 ug","chip_protocol_bead_amount":"70 ul bed volume","chip_protocol":"Bernstein_BROAD_ENCODE_protocol","extraction_protocol_sonication_cycles":"1","chip_antibody_catalog":"ab8895","chip_antibody_provider":"Abcam","chip_antibody_lot":"151302","experiment_type":"Histone H3K4me1","extraction_protocol_type_of_sonicator":"Bioruptor","original_filename":"GSM670015_BI.Brain_Mid_Frontal_Lobe.H3K4me1.112.bigWig","Embargo end date":"2011-12-31"},"geolst":["GSM670015"]},{"type":"bigWig","name":"H3K4me1 of Brain  Substantia Nigra","url":"http://egg.wustl.edu/d/hg19/GSM669941.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":133,"pb":66,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13045","22010","30003","40011","60002","70009"],"details":{"sample_alias":"171"," sample_common_name":"Brain, Substantia Nigra","collection_method":"post-mortem","donor_health_status":"NA","molecule":"genomic DNA","disease":"none","tissue_type":"Substantia Nigra","passage_if_expanded":"NA","donor_ethnicity":"NA","donor_sex":"Female","biomaterial_type":"Primary Tissue","tissue_depot":"brain","donor_id":"112","biomaterial_provider":"Rush University Medical Center","donor_age":"75","chip_protocol_bead_type":"Protein A-Sepharose 4B","chip_antibody":"H3K4Me1","chip_protocol_chromatin_amount":"10 million cells","extraction_protocol":"SDS lysis","chip_protocol_antibody_amount":"2-15 ug","chip_protocol_bead_amount":"70 ul bed volume","chip_protocol":"Bernstein_BROAD_ENCODE_protocol","extraction_protocol_sonication_cycles":"1","chip_antibody_catalog":"ab8895","chip_antibody_provider":"Abcam","chip_antibody_lot":"151304","experiment_type":"Histone H3K4me1","extraction_protocol_type_of_sonicator":"Bioruptor","original_filename":"GSM669941_BI.Brain_Substantia_Nigra.H3K4me1.112.bigWig","Embargo end date":"2011-12-31"},"geolst":["GSM669941"]},{"type":"bigWig","name":"Filtered_Colon_Normal","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/Filtered_Colon_Normal.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bigWig","name":"Filtered_Colon_Tumor","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/Filtered_Colon_Tumor.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bigWig","name":"H3K4me1 of colonic mucosa","url":"http://egg.wustl.edu/d/hg19/GSM916046.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":133,"pb":66,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13014","22010","30003","40164","60002","70004"],"details":{"sample_alias":"BioSam 157 REMC 19","sample_common_name":"Colonic Mucosa","collection_method":"Surgery","donor_health_status":"NL colonic mucosa, colon rmvd as part of abmnl Sarc","molecule":"genomic DNA","disease":"NL colonic mucosa, colon rmvd as part of abmnl Sarc","tissue_type":"Colonic Mucosa","donor_ethnicity":"Caucasian","donor_sex":"Female","biomaterial_type":"Primary Tissue","tissue_depot":"Colon","donor_id":"155","biomaterial_provider":"MGH","donor_age":"56.0 Years","chip_protocol_bead_type":"Protein A-Sepharose 4B","chip_antibody":"H3K4me1","chip_protocol_chromatin_amount":"0.5 to 3 million cells","extraction_protocol":"cell/nuclei lysis","chip_protocol_antibody_amount":"~1 ug","chip_protocol_bead_amount":"10 ul bed volume","chip_protocol":"Bernstein_BROAD_ENCODE_protocol","extraction_protocol_sonication_cycles":"1","chip_antibody_catalog":"ab8895","chip_antibody_provider":"Abcam","chip_antibody_lot":"659352","experiment_type":"Histone H3K4me1","extraction_protocol_type_of_sonicator":"Branson"},"geolst":["GSM916046"]},{"type":"bigWig","name":"H3K27ac of Human Sigmoid Colon Tissue","url":"http://egg.wustl.edu/d/hg19/GSM910559_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":150,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13213","22019","30002","40216","60001","70004"],"details":{"sample alias":"STL003SG-01","sample common name":"Sigmoid Colon","molecule":"genomic DNA","disease":"None","biomaterial_provider":"Shin Lin, Stanford University","biomaterial_type":"Primary Tissue","tissue_type":"Sigmoid Colon","tissue_depot":"N/A","collection_method":"Autopsy","donor_id":"STL003","donor_age":"34","donor_health_status":"polysubstance abuse (NO diabetes, hypertension, coronary artery disease, cancer)","donor_sex":"Male","donor_ethnicity":"Caucasian","experiment_type":"Histone H3K27ac","extraction_protocol":"See http://bioinformatics-renlab.ucsd.edu/RenLabChipProtocolV1.pdf","extraction_protocol_type_of_sonicator":"Biorupter","extraction_protocol_sonication_cycles":"80","chip_protocol":"See http://bioinformatics-renlab.ucsd.edu/RenLabChipProtocolV1.pdf","chip_protocol_chromatin_amount":"500 micrograms","chip_protocol_bead_type":"magnetic anti-rabbit","chip_protocol_bead_amount":"33,500,000","chip_protocol_antibody_amount":"5 micrograms","chip_antibody":"H3K27ac","chip_antibody_provider":"Active Motif","chip_antibody_catalog":"39133","chip_antibody_lot":"19208002","original_filename":"UCSD.Sigmoid_Colon.H3K27ac.STL003.bigWig"},"geolst":["GSM910559"]},{"type":"bigWig","name":"GM12878_mCRF","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/GM12878_mCRF.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bigWig","name":"Bernstein GM12878 H3K27ac","url":"http://egg.wustl.edu/d/hg19/GSM733771_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":150,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13047","22019","30003"],"details":{"cell":"GM12878","cell organism":"Human","cell description":"lymphoblastoid","cell karyotype":"relatively normal","cell lineage":"International HapMap Project - CEPH/Utah - European Caucasion","cell sex":"F","antibody":"H3K27ac","antibody description":"rabbit polyclonal","antibody target description":"Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.","antibody vendor name":"Abcam","original_filename":"GSM733771_hg19_wgEncodeBroadHistoneGm12878H3k27acStdSig.bigWig"},"geolst":["GSM733771"]},{"type":"bigWig","name":"Bernstein GM12878 H3K4me1","url":"http://egg.wustl.edu/d/hg19/GSM733772_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":133,"pb":66,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13047","22010","30003"],"details":{"cell":"GM12878","cell organism":"Human","cell description":"lymphoblastoid","cell karyotype":"relatively normal","cell lineage":"International HapMap Project - CEPH/Utah - European Caucasion","cell sex":"F","antibody":"H3K4me1","antibody description":"rabbit polyclonal","antibody target description":"Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.","antibody vendor name":"Abcam","original_filename":"GSM733772_hg19_wgEncodeBroadHistoneGm12878H3k04me1StdSigV2.bigWig"},"geolst":["GSM733772"]},{"type":"bigWig","name":"Filtered_HepG2_WGBS","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/Filtered_HepG2_WGBS.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bigWig","name":"Broad ChipSeq HepG2 H3K4me1","url":"http://egg.wustl.edu/d/hg19/GSM798321_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":133,"pb":66,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13048","22010","30003"],"details":{"lab":"Broad","lab description":"Bernstein - Broad Institute","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"HepG2","cell organism":"human","cell description":"liver carcinoma","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"H3K4me1","antibody antibodydescription":"rabbit polyclonal","antibody targetdescription":"Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.","antibody vendorname":"Abcam","antibody vendorid":"ab8895","control":"std","control description":"Standard input signal for most experiments.","controlid":"HepG2/Input/std","replicate":"1","replicate description":"tier 1","original_filename":"GSM798321_hg19_wgEncodeBroadHistoneHepg2H3k04me1StdSig.bigWig"},"geolst":["GSM798321"]},{"type":"bigWig","name":"Bernstein HepG2 H3K27ac","url":"http://egg.wustl.edu/d/hg19/GSM733743_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":150,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13048","22019","30003"],"details":{"cell":"HepG2","cell organism":"Human","cell description":"liver carcinoma","cell karyotype":"cancer","cell lineage":"endoderm","cell sex":"M","antibody":"H3K27ac","antibody description":"rabbit polyclonal","antibody target description":"Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.","antibody vendor name":"Abcam","original_filename":"GSM733743_hg19_wgEncodeBroadHistoneHepg2H3k27acStdSig.bigWig"},"geolst":["GSM733743"]},{"type":"bigWig","name":"HMEC_WGBS_Over5r","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/HMEC_WGBS_Over5r.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bigWig","name":"Bernstein HMEC H3K4me1","url":"http://egg.wustl.edu/d/hg19/GSM733705_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":133,"pb":66,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13049","22010","30003"],"details":{"cell":"HMEC","cell organism":"Human","cell description":"Human Mammary Epithelial Cells","cell sex":"F","antibody":"H3K4me1","antibody description":"rabbit polyclonal","antibody target description":"Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.","antibody vendor name":"Abcam","original_filename":"GSM733705_hg19_wgEncodeBroadHistoneHmecH3k4me1StdSig.bigWig"},"geolst":["GSM733705"]},{"type":"bigWig","name":"Bernstein HMEC H3K27ac","url":"http://egg.wustl.edu/d/hg19/GSM733660_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":150,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13049","22019","30003"],"details":{"cell":"HMEC","cell organism":"Human","cell description":"Human Mammary Epithelial Cells","cell sex":"F","antibody":"H3K27ac","antibody description":"rabbit polyclonal","antibody target description":"Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.","antibody vendor name":"Abcam","original_filename":"GSM733660_hg19_wgEncodeBroadHistoneHmecH3k27acStdSig.bigWig"},"geolst":["GSM733660"]},{"type":"bigWig","name":"HCC1954_WGBS_Over5r","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/HCC1954_WGBS_Over5r.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bigWig","name":"HCC1954_H3K4me1","url":"http://wangftp.wustl.edu/~bzhang/Cancer_epi/HCC1954_H3K4me1.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":128,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":5}},{"type":"bigWig","name":"HCC1954_H3K27ac","url":"http://wangftp.wustl.edu/~bzhang/Cancer_epi/HCC1954_H3K27ac.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":170,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":5}},{"type":"bigWig","name":"Ovary_GSM1010980_WGBS","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/Ovary_GSM1010980_WGBS.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bedGraph","name":"ChIP-Seq Analysis of H3K4me1 in Human Ovary Tissue","url":"http://egg.wustl.edu/d/hg19/GSM1013148_1.gz","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":133,"pb":66,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13302","22010","30002","40271"],"details":{"sample alias":"STL002OV-01","sample common name":"Ovary","molecule":"genomic DNA","disease":"iron deficiency, bipolar","biomaterial_provider":"Shin Lin, Stanford University","biomaterial_type":"Primary Tissue","tissue_type":"Ovary","tissue_depot":"N/A","collection_method":"Autopsy","donor_id":"STL002","donor_age":"30","donor_health_status":"iron deficiency, bipolar disease (NO diabetes, hypertension, coronary artery disease, cancer)","donor_sex":"Female","donor_ethnicity":"Caucasian","experiment_type":"Histone H3K4me1","extraction_protocol":"See http://bioinformatics-renlab.ucsd.edu/RenLabChipProtocolV1.pdf","extraction_protocol_type_of_sonicator":"Biorupter","extraction_protocol_sonication_cycles":"80","chip_protocol":"See http://bioinformatics-renlab.ucsd.edu/RenLabChipProtocolV1.pdf","chip_protocol_chromatin_amount":"500 micrograms","chip_protocol_bead_type":"magnetic anti-rabbit","chip_protocol_bead_amount":"33,500,000","chip_protocol_antibody_amount":"5 micrograms","chip_antibody":"H3K4me1","chip_antibody_provider":"Abcam","chip_antibody_catalog":"ab8895","chip_antibody_lot":"720417","original_filename":"GSM1013148_UCSD.Ovary.H3K4me1.STL002.wig"},"geolst":["GSM1013148"]},{"type":"bedGraph","name":"ChIP-Seq Analysis of H3K27ac in Human Ovary Tissue","url":"http://egg.wustl.edu/d/hg19/GSM956009_1.gz","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":150,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13302","22019","30002","40271"],"details":{"sample alias":"STL002OV-01","sample common name":"Ovary","molecule":"genomic DNA","disease":"iron deficiency, bipolar","biomaterial_provider":"Shin Lin, Stanford University","biomaterial_type":"Primary Tissue","tissue_type":"Ovary","tissue_depot":"N/A","collection_method":"Autopsy","donor_id":"STL002","donor_age":"30","donor_health_status":"iron deficiency, bipolar disease (NO diabetes, hypertension, coronary artery disease, cancer)","donor_sex":"Female","donor_ethnicity":"Caucasian","experiment_type":"Histone H3K27ac","extraction_protocol":"See http://bioinformatics-renlab.ucsd.edu/RenLabChipProtocolV1.pdf","extraction_protocol_type_of_sonicator":"Biorupter","extraction_protocol_sonication_cycles":"80","chip_protocol":"See http://bioinformatics-renlab.ucsd.edu/RenLabChipProtocolV1.pdf","chip_protocol_chromatin_amount":"500 micrograms","chip_protocol_bead_type":"magnetic anti-rabbit","chip_protocol_bead_amount":"33,500,000","chip_protocol_antibody_amount":"5 micrograms","chip_antibody":"H3K27ac","chip_antibody_provider":"Active Motif","chip_antibody_catalog":"39133","chip_antibody_lot":"19208002","original_filename":"GSM956009_UCSD.Ovary.H3K27ac.STL002.wig"},"geolst":["GSM956009"]},{"type":"bigWig","name":"Skin03_Fibroblast.mCRF","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/Skin03_Fibroblast.mCRF.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bigWig","name":"H3K4me1 Penis  Foreskin  Fibroblast skin03","url":"http://egg.wustl.edu/d/hg19/GSM958164_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":133,"pb":66,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13144","22010","30014","40226","60001","70009"],"details":{"sample alias":"Penis, Foreskin, Fibroblast skin03","sample common name":"Penis, Foreskin, Fibroblast Primary Cells","molecule":"genomic DNA","disease":"None","biomaterial_provider":"SFVAMC Dermatology","biomaterial_type":"Primary Cell Culture","cell_type":"Fibroblast","markers":"NA","culture_conditions":"Invitrogen 106 + LSGS","donor_id":"skin03","donor_age":"Neonate","donor_health_status":"Disease Free","donor_sex":"Male","donor_ethnicity":"NA","passage_if_expanded":"2","karyotype":"46, XY","parity":"NA","experiment_type":"Histone H3K4me1","extraction_protocol":"BCCAGSC ChIP Standard Operating Procedure","extraction_protocol_type_of_sonicator":"Fisher 550 Sonic Dismembrator","extraction_protocol_sonication_cycles":"10 min","chip_protocol":"BCCAGSC ChIP Standard Operating Procedure","chip_protocol_chromatin_amount":"5 ug","chip_protocol_bead_type":"Sepharose A/G beads","chip_protocol_bead_amount":"20 ul","chip_protocol_antibody_amount":"5 ug","size_fraction":"111-411 bp","chip_antibody":"H3K4me1","chip_antibody_provider":"Diagenode","chip_antibody_catalog":"pAb-037-050","chip_antibody_lot":"A399-002341P","original_filename":"UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me1.skin03.bigWig"},"geolst":["GSM958164"]},{"type":"bigWig","name":"H3K27ac Penis  Foreskin  Fibroblast skin03","url":"http://egg.wustl.edu/d/hg19/GSM958163_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":150,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13144","22019","30014","40226","60001","70009"],"details":{"sample alias":"Penis, Foreskin, Fibroblast skin03","sample common name":"Penis, Foreskin, Fibroblast Primary Cells","molecule":"genomic DNA","disease":"None","biomaterial_provider":"SFVAMC Dermatology","biomaterial_type":"Primary Cell Culture","cell_type":"Fibroblast","markers":"NA","culture_conditions":"Invitrogen 106 + LSGS","donor_id":"skin03","donor_age":"Neonate","donor_health_status":"Disease Free","donor_sex":"Male","donor_ethnicity":"NA","passage_if_expanded":"2","karyotype":"46, XY","parity":"NA","experiment_type":"Histone H3K27ac","extraction_protocol":"BCCAGSC ChIP Standard Operating Procedure","extraction_protocol_type_of_sonicator":"Fisher 550 Sonic Dismembrator","extraction_protocol_sonication_cycles":"10 min","chip_protocol":"BCCAGSC ChIP Standard Operating Procedure","chip_protocol_chromatin_amount":"5 ug","chip_protocol_bead_type":"Sepharose A/G beads","chip_protocol_bead_amount":"20 ul","chip_protocol_antibody_amount":"2.5 ug","size_fraction":"122-443 bp","chip_antibody":"H3K27ac","chip_antibody_provider":"Abcam","chip_antibody_catalog":"ab4729","chip_antibody_lot":"GR28147-1","original_filename":"UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K27ac.skin03.bigWig"},"geolst":["GSM958163"]},{"type":"bigWig","name":"Skin03_Keratinocyte.mCRF","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/Skin03_Keratinocyte.mCRF.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bigWig","name":"H3K4me1 Penis  Foreskin  Keratinocyte skin03","url":"http://egg.wustl.edu/d/hg19/GSM958161_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":133,"pb":66,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13035","22010","30014","40226","60001","70009"],"details":{"sample alias":"Penis, Foreskin, Keratinocyte skin03","sample common name":"Penis, Foreskin, Keratinocyte Primary Cells","molecule":"genomic DNA","disease":"None","biomaterial_provider":"SFVAMC Dermatology","biomaterial_type":"Primary Cell Culture","cell_type":"Keratinocyte","markers":"NA","culture_conditions":"Invitrogen 154CF + HKGS + .07mM Ca","donor_id":"skin03","donor_age":"Neonate","donor_health_status":"Disease Free","donor_sex":"Male","donor_ethnicity":"NA","passage_if_expanded":"2","karyotype":"46, XY","parity":"NA","experiment_type":"Histone H3K4me1","extraction_protocol":"BCCAGSC ChIP Standard Operating Procedure","extraction_protocol_type_of_sonicator":"Fisher 550 Sonic Dismembrator","extraction_protocol_sonication_cycles":"20 min","chip_protocol":"BCCAGSC ChIP Standard Operating Procedure","chip_protocol_chromatin_amount":"5 ug","chip_protocol_bead_type":"Sepharose A/G beads","chip_protocol_bead_amount":"20 ul","chip_protocol_antibody_amount":"5 ug","size_fraction":"134-471 bp","chip_antibody":"H3K4me1","chip_antibody_provider":"Diagenode","chip_antibody_catalog":"pAb-037-050","chip_antibody_lot":"A399-002341P","original_filename":"UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K4me1.skin03.bigWig"},"geolst":["GSM958161"]},{"type":"bigWig","name":"H3K27ac Penis  Foreskin  Keratinocyte skin03","url":"http://egg.wustl.edu/d/hg19/GSM958156_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":150,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13035","22019","30014","40226","60001","70009"],"details":{"sample alias":"Penis, Foreskin, Keratinocyte skin03","sample common name":"Penis, Foreskin, Keratinocyte Primary Cells","molecule":"genomic DNA","disease":"None","biomaterial_provider":"SFVAMC Dermatology","biomaterial_type":"Primary Cell Culture","cell_type":"Keratinocyte","markers":"NA","culture_conditions":"Invitrogen 154CF + HKGS + .07mM Ca","donor_id":"skin03","donor_age":"Neonate","donor_health_status":"Disease Free","donor_sex":"Male","donor_ethnicity":"NA","passage_if_expanded":"2","karyotype":"46, XY","parity":"NA","experiment_type":"Histone H3K27ac","extraction_protocol":"BCCAGSC ChIP Standard Operating Procedure","extraction_protocol_type_of_sonicator":"Fisher 550 Sonic Dismembrator","extraction_protocol_sonication_cycles":"20 min","chip_protocol":"BCCAGSC ChIP Standard Operating Procedure","chip_protocol_chromatin_amount":"5 ug","chip_protocol_bead_type":"Sepharose A/G beads","chip_protocol_bead_amount":"20 ul","chip_protocol_antibody_amount":"2.5 ug","size_fraction":"121-459 bp","chip_antibody":"H3K27ac","chip_antibody_provider":"Abcam","chip_antibody_catalog":"ab4729","chip_antibody_lot":"GR28147-1","original_filename":"UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27ac.skin03.bigWig"},"geolst":["GSM958156"]},{"type":"bigWig","name":"Skin03_Melanocyte.mCRF","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/Skin03_Melanocyte.mCRF.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bigWig","name":"H3K4me1 Penis  Foreskin  Melanocyte skin03","url":"http://egg.wustl.edu/d/hg19/GSM958152_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":133,"pb":66,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13145","22010","30014","40226","60001","70009"],"details":{"sample alias":"Penis, Foreskin, Melanocyte skin03","sample common name":"Penis, Foreskin, Melanocyte Primary Cells","molecule":"genomic DNA","disease":"None","biomaterial_provider":"SFVAMC Dermatology","biomaterial_type":"Primary Cell Culture","cell_type":"Melanocyte","markers":"NA","culture_conditions":"Invitrogen 254 + HMGS","donor_id":"skin03","donor_age":"Neonate","donor_health_status":"Disease Free","donor_sex":"Male","donor_ethnicity":"NA","passage_if_expanded":"2","karyotype":"46, XY","parity":"NA","experiment_type":"Histone H3K4me1","extraction_protocol":"BCCAGSC ChIP Standard Operating Procedure","extraction_protocol_type_of_sonicator":"Fisher 550 Sonic Dismembrator","extraction_protocol_sonication_cycles":"10 min","chip_protocol":"BCCAGSC ChIP Standard Operating Procedure","chip_protocol_chromatin_amount":"10 ug","chip_protocol_bead_type":"Sepharose A/G beads","chip_protocol_bead_amount":"20 ul","chip_protocol_antibody_amount":"5 ug","size_fraction":"97-408 bp","chip_antibody":"H3K4me1","chip_antibody_provider":"Diagenode","chip_antibody_catalog":"pAb-037-050","chip_antibody_lot":"A399-002341P","original_filename":"UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K4me1.skin03.bigWig"},"geolst":["GSM958152"]},{"type":"bigWig","name":"H3K27ac Penis  Foreskin  Melanocyte skin03","url":"http://egg.wustl.edu/d/hg19/GSM958157_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":150,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["13145","22019","30014","40226","60001","70009"],"details":{"sample alias":"Penis, Foreskin, Melanocyte skin03","sample common name":"Penis, Foreskin, Melanocyte Primary Cells","molecule":"genomic DNA","disease":"None","biomaterial_provider":"SFVAMC Dermatology","biomaterial_type":"Primary Cell Culture","cell_type":"Melanocyte","markers":"NA","culture_conditions":"Invitrogen 254 + HMGS","donor_id":"skin03","donor_age":"Neonate","donor_health_status":"Disease Free","donor_sex":"Male","donor_ethnicity":"NA","passage_if_expanded":"2","karyotype":"46, XY","parity":"NA","experiment_type":"Histone H3K27ac","extraction_protocol":"BCCAGSC ChIP Standard Operating Procedure","extraction_protocol_type_of_sonicator":"Fisher 550 Sonic Dismembrator","extraction_protocol_sonication_cycles":"10 min","chip_protocol":"BCCAGSC ChIP Standard Operating Procedure","chip_protocol_chromatin_amount":"15 ug","chip_protocol_bead_type":"Sepharose A/G beads","chip_protocol_bead_amount":"20 ul","chip_protocol_antibody_amount":"2.5 ug","size_fraction":"96-433 bp","chip_antibody":"H3K27ac","chip_antibody_provider":"Abcam","chip_antibody_catalog":"ab4729","chip_antibody_lot":"GR28147-1","original_filename":"UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K27ac.skin03.bigWig"},"geolst":["GSM958157"]},{"type":"bigWig","name":"Endometrium_mCRF.mCRF","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/Endometrium_mCRF.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bigWig","name":"EAC-1.DMR","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/EAC-1.DMR.bw","mode":1,"qtc":{"anglescale":1,"pr":238,"pg":180,"pb":34,"nr":30,"ng":144,"nb":255,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1},"annotation":["14049","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"EAC-2.DMR","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/EAC-2.DMR.bw","mode":1,"qtc":{"anglescale":1,"pr":238,"pg":180,"pb":34,"nr":30,"ng":144,"nb":255,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1},"annotation":["14049","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"EAC-3.DMR","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/EAC-3.DMR.bw","mode":1,"qtc":{"anglescale":1,"pr":238,"pg":180,"pb":34,"nr":30,"ng":144,"nb":255,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1},"annotation":["14049","30025"],"custom_annotation":["methylMnM","bigWig"]},{"type":"bigWig","name":"EAC1_mCRFnew.bw","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/EAC1_mCRFnew.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bigWig","name":"EAC2_mCRFnew.bw","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/EAC2_mCRFnew.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bigWig","name":"EAC3_mCRFnew.bw","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/EAC3_mCRFnew.bw","mode":1,"qtc":{"anglescale":1,"pr":128,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"bg":"rgb(224, 224, 224)"},"annotation":["14049","21001","30025"]},{"type":"bigWig","name":"EAC-1.MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/EAC-1.MRE.CNV.bw","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":102,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["14049","21001","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"EAC-2.MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/EAC-2.MRE.CNV.bw","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":102,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["14049","21001","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"EAC-3.MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/EAC-3.MRE.CNV.bw","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":102,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["14049","21001","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"EAC-1.MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/EAC-1.MeDIP.CNV.bw","mode":1,"qtc":{"anglescale":1,"pr":24,"pg":116,"pb":205,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["14049","21003","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"EAC-2.MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/EAC-2.MeDIP.CNV.bw","mode":1,"qtc":{"anglescale":1,"pr":24,"pg":116,"pb":205,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["14049","21003","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"EAC-3.MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/EAC-3.MeDIP.CNV.bw","mode":1,"qtc":{"anglescale":1,"pr":24,"pg":116,"pb":205,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["14049","21003","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"Normal_E.MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/Normal_E.MeDIP.bw","mode":1,"qtc":{"anglescale":1,"pr":69,"pg":139,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["14049","21003","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"Normal_E.MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/Normal_E.MRE.bw","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":102,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["14049","21001","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"UPSC-1.MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/UPSC-1.MRE.CNV.bw","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":102,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["14050","21001","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"UPSC-2.MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/UPSC-2.MRE.CNV.bw","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":102,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["14050","21001","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"UPSC-3.MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/UPSC-3.MRE.CNV.bw","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":102,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["14050","21001","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"UPSC-1.MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/UPSC-1.MeDIP.CNV.bw","mode":1,"qtc":{"anglescale":1,"pr":238,"pg":44,"pb":44,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["14050","21003","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"UPSC-2.MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/UPSC-2.MeDIP.CNV.bw","mode":1,"qtc":{"anglescale":1,"pr":238,"pg":44,"pb":44,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["14050","21003","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"UPSC-3.MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/UPSC-3.MeDIP.CNV.bw","mode":1,"qtc":{"anglescale":1,"pr":238,"pg":44,"pb":44,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["14050","21003","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"UPSC-1.DMR","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/UPSC-1.DMR.bw","mode":1,"qtc":{"anglescale":1,"pr":238,"pg":180,"pb":34,"nr":30,"ng":144,"nb":255,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["14050","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"UPSC-2.DMR","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/UPSC-2.DMR.bw","mode":1,"qtc":{"anglescale":1,"pr":238,"pg":180,"pb":34,"nr":30,"ng":144,"nb":255,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["14050","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"UPSC-3.DMR","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/UPSC-3.DMR.bw","mode":1,"qtc":{"anglescale":1,"pr":238,"pg":180,"pb":34,"nr":30,"ng":144,"nb":255,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1,"smooth":3},"annotation":["14050","30025"],"custom_annotation":["bigWig"]},{"type":"native_track","list":[{"name":"rmsk_ensemble","mode":1,"qtc":{"anglescale":1,"height":20},"categories":{"1":["SINE - short interspersed nuclear elements","#cc0000"],"2":["LINE - long interspersed nuclear element","#FF6600"],"3":["LTR - long terminal repeat element","#006600"],"4":["DNA transposon","#4A72E8"],"5":["Simple repeat, micro-satellite","#AB833B"],"6":["Satellite repeat","#660000"],"7":["Low complexity repeat","#663333"],"8":["RNA repeat","#cc33ff"],"9":["Other repeats","#488E8E"],"10":["Unknown","#5C5C5C"],"-1":["no information","transparent"]}},{"name":"refGene","mode":3,"qtc":{"anglescale":1,"pr":0,"pg":77,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"rgb(0,0,0)","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"rgb(0,77,153)"}}]},{"type":"bigWig","name":"UPSC-3.CNV","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/UPSC-3.CNV.bw","mode":"hide","qtc":{"pr":204,"pg":255,"pb":255,"thtype":0},"annotation":["14050","26002","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"UPSC-2.CNV","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/UPSC-2.CNV.bw","mode":"hide","qtc":{"pr":204,"pg":255,"pb":255,"thtype":0},"annotation":["14050","26002","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"UPSC-1.CNV","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/UPSC-1.CNV.bw","mode":"hide","qtc":{"pr":204,"pg":255,"pb":255,"thtype":0},"annotation":["14050","26002","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"EAC-3.CNV","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/EAC-3.CNV.bw","mode":"hide","qtc":{"pr":204,"pg":255,"pb":255,"thtype":0},"annotation":["14049","26002","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"EAC-2.CNV","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/EAC-2.CNV.bw","mode":"hide","qtc":{"pr":204,"pg":255,"pb":255,"thtype":0},"annotation":["14049","26002","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"EAC-1.CNV","url":"http://wangftp.wustl.edu/~bzhang/CNV_EC/EAC-1.CNV.bw","mode":"hide","qtc":{"pr":204,"pg":255,"pb":255,"thtype":0},"annotation":["14049","26002","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM5_H3K4me3_ChIP-seq","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM5_H3K4me3.bw","mode":"hide","qtc":{"pr":238,"pg":64,"pb":0,"height":25,"thtype":0},"annotation":["14048","22009","30025"]},{"type":"bigWig","name":"GBM2_H3K4me3_ChIP-seq","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM2_H3K4me3.bw","mode":"hide","qtc":{"pr":238,"pg":64,"pb":0,"height":25,"thtype":0},"annotation":["14048","22009","30025"]},{"type":"bigWig","name":"GBM1_H3K4me3_ChIP-seq","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM1_H3K4me3.bw","mode":"hide","qtc":{"pr":238,"pg":64,"pb":0,"height":25,"thtype":0},"annotation":["14048","22009","30025"]},{"type":"bigWig","name":"GBM5_DMR","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM5_DMR.bw","mode":"hide","qtc":{"pr":238,"pg":180,"pb":34,"nr":30,"ng":144,"nb":255,"height":15,"thtype":0},"annotation":["14048","30025"]},{"type":"bigWig","name":"GBM4_DMR","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM4_DMR.bw","mode":"hide","qtc":{"pr":238,"pg":180,"pb":34,"nr":30,"ng":144,"nb":255,"height":15,"thtype":0},"annotation":["14048","30025"]},{"type":"bigWig","name":"GBM3_DMR","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM3_DMR.bw","mode":"hide","qtc":{"pr":238,"pg":180,"pb":34,"nr":30,"ng":144,"nb":255,"height":15,"thtype":0},"annotation":["14048","30025"]},{"type":"bigWig","name":"GBM2_DMR","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM2_DMR.bw","mode":"hide","qtc":{"pr":238,"pg":180,"pb":34,"nr":30,"ng":144,"nb":255,"height":15,"thtype":0},"annotation":["14048","30025"]},{"type":"bigWig","name":"GBM1_DMR","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM1_DMR.bw","mode":"hide","qtc":{"pr":238,"pg":180,"pb":34,"nr":30,"ng":144,"nb":255,"height":15,"thtype":0},"annotation":["14048","30025"]},{"type":"bigWig","name":"Normal_2_MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBMNormal2_MeDIP.bw","mode":"hide","qtc":{"pr":0,"pg":139,"pb":69,"height":25,"thtype":0},"annotation":["14048","21003","30025"]},{"type":"bigWig","name":"Normal_1_MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBMNormal1_MeDIP.bw","mode":"hide","qtc":{"pr":0,"pg":139,"pb":69,"height":25,"thtype":0},"annotation":["14048","21003","30025"]},{"type":"bigWig","name":"GBM5_MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM5_MeDIP.CNV.bw","mode":"hide","qtc":{"pr":153,"pg":0,"pb":0,"height":25,"thtype":0},"annotation":["14048","21003","30025"]},{"type":"bigWig","name":"GBM4_MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM4_MeDIP.CNV.bw","mode":"hide","qtc":{"pr":153,"pg":0,"pb":0,"height":25,"thtype":0},"annotation":["14048","21003","30025"]},{"type":"bigWig","name":"GBM3_MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM3_MeDIP.CNV.bw","mode":"hide","qtc":{"pr":153,"pg":0,"pb":0,"height":25,"thtype":0},"annotation":["14048","21003","30025"]},{"type":"bigWig","name":"GBM2_MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM2_MeDIP.CNV.bw","mode":"hide","qtc":{"pr":153,"pg":0,"pb":0,"height":25,"thtype":0},"annotation":["14048","21003","30025"]},{"type":"bigWig","name":"GBM1_MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM1_MeDIP.CNV.bw","mode":"hide","qtc":{"pr":153,"pg":0,"pb":0,"height":25,"thtype":0},"annotation":["14048","21003","30025"]},{"type":"bigWig","name":"Normal_2_MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBMNormal2_MRE.bw","mode":"hide","qtc":{"pr":0,"pg":102,"pb":0,"height":25,"thtype":0},"annotation":["14048","21001","30025"]},{"type":"bigWig","name":"Normal_1_MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBMNormal1_MRE.bw","mode":"hide","qtc":{"pr":0,"pg":102,"pb":0,"height":25,"thtype":0},"annotation":["14048","21001","30025"]},{"type":"bigWig","name":"GBM5_MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM5_MRE.CNV.bw","mode":"hide","qtc":{"pr":0,"pg":102,"pb":0,"height":25,"thtype":0},"annotation":["14048","21001","30025"]},{"type":"bigWig","name":"GBM4_MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM4_MRE.CNV.bw","mode":"hide","qtc":{"pr":0,"pg":102,"pb":0,"height":25,"thtype":0},"annotation":["14048","21001","30025"]},{"type":"bigWig","name":"GBM3_MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM3_MRE.CNV.bw","mode":"hide","qtc":{"pr":0,"pg":102,"pb":0,"height":25,"thtype":0},"annotation":["14048","21001","30025"]},{"type":"bigWig","name":"GBM2_MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM2_MRE.CNV.bw","mode":"hide","qtc":{"pr":0,"pg":102,"pb":0,"height":25,"thtype":0},"annotation":["14048","21001","30025"]},{"type":"bigWig","name":"GBM1_MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM1_MRE.CNV.bw","mode":"hide","qtc":{"pr":0,"pg":102,"pb":0,"height":25,"thtype":0},"annotation":["14048","21001","30025"]},{"type":"bigWig","name":"GBM5_CNV","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM5_CNV.bw","mode":"hide","qtc":{"pr":204,"pg":255,"pb":255,"thtype":0},"annotation":["14048","26002","30025"]},{"type":"bigWig","name":"GBM4_CNV","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM4_CNV.bw","mode":"hide","qtc":{"pr":204,"pg":255,"pb":255,"thtype":0},"annotation":["14048","26002","30025"]},{"type":"bigWig","name":"GBM3_CNV","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM3_CNV.bw","mode":"hide","qtc":{"pr":204,"pg":255,"pb":255,"thtype":0},"annotation":["14048","26002","30025"]},{"type":"bigWig","name":"GBM2_CNV","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM2_CNV.bw","mode":"hide","qtc":{"pr":204,"pg":255,"pb":255,"thtype":0},"annotation":["14048","26002","30025"]},{"type":"bigWig","name":"GBM1_CNV","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM1_CNV.bw","mode":"hide","qtc":{"pr":204,"pg":255,"pb":255,"thtype":0},"annotation":["14048","26002","30025"]},{"type":"coordinate_override","coord":"chr8,103657435,chr8,103686427"},{"type":"metadata","vocabulary":{"Computational Tools":["methylMnM","methylCRF"],"Data format":["BED","bigWig","bedGraph","interaction","categorical","methylC","annotation","BAM"]},"source":"http://wangftp.wustl.edu/~bzhang/CNV_EC/DataHub_EC_CNV","termname":{},"termcolor":{},"termdesc":{}},{"type":"native_metadata_terms","list":["Assay","Sample","Donor Gender","Donor Ethnicity"]}]