[{"type":"bigwig","name":"Combined_HUVEC_GROseq_notx_RerunsAdded2015_MinnaSamplesAdded_Sep2015+","url":"https://bioinformatics.uef.fi/biowhat/henri-hubs/HUVEC-NotxHypox-hub-2016/hg19/Combined_HUVEC_GROseq_notx_RerunsAdded2015_MinnaSamplesAdded_Sep2015pos.ucsc.bigWig","mode":1,"qtc":{"anglescale":1,"pr":221,"pg":27,"pb":118,"nr":255,"ng":0,"nb":0,"pth":"rgb(154,18,82)","nth":"#800000","thtype":1,"thmin":0,"thmax":15,"thpercentile":90,"height":125,"summeth":1,"smooth":5,"bg":null},"metadata":{}},{"type":"bigwig","name":"Combined_HUVEC_GROseq_notx_RerunsAdded2015_MinnaSamplesAdded_Sep2015-","url":"https://bioinformatics.uef.fi/biowhat/henri-hubs/HUVEC-NotxHypox-hub-2016/hg19/Combined_HUVEC_GROseq_notx_RerunsAdded2015_MinnaSamplesAdded_Sep2015neg.ucsc.bigWig","mode":1,"qtc":{"anglescale":1,"pr":221,"pg":27,"pb":118,"nr":106,"ng":90,"nb":205,"pth":"rgb(154,18,82)","nth":"#800000","thtype":1,"thmin":-15,"thmax":0,"thpercentile":90,"height":125,"summeth":1,"smooth":5},"metadata":{}},{"type":"bigwig","name":"Combined_HUVEC_GROseq_hypox_RerunsAdded2015_MinnaSamplesAdded_Sep2015+","url":"https://bioinformatics.uef.fi/biowhat/henri-hubs/HUVEC-NotxHypox-hub-2016/hg19/Combined_HUVEC_GROseq_hypox_RerunsAdded2015_MinnaSamplesAdded_Sep2015pos.ucsc.bigWig","mode":1,"qtc":{"anglescale":1,"pr":43,"pg":162,"pb":95,"nr":255,"ng":0,"nb":0,"pth":"rgb(30,113,66)","nth":"#800000","thtype":1,"thmin":0,"thmax":15,"thpercentile":90,"height":125,"summeth":1,"smooth":5},"metadata":{}},{"type":"bigwig","name":"Combined_HUVEC_GROseq_hypox_RerunsAdded2015_MinnaSamplesAdded_Sep2015-","url":"https://bioinformatics.uef.fi/biowhat/henri-hubs/HUVEC-NotxHypox-hub-2016/hg19/Combined_HUVEC_GROseq_hypox_RerunsAdded2015_MinnaSamplesAdded_Sep2015neg.ucsc.bigWig","mode":1,"qtc":{"anglescale":1,"pr":43,"pg":162,"pb":95,"nr":132,"ng":194,"nb":194,"pth":"rgb(30,113,66)","nth":"#800000","thtype":1,"thmin":-15,"thmax":0,"thpercentile":90,"height":125,"summeth":1,"smooth":5},"metadata":{}},{"type":"interaction","name":"HUVEC_notx_HypoxUP_TSS","url":"https://bioinformatics.uef.fi/biowhat/henri_interactions/HUVEC_TCC1and2_notx_10kbCentered_HypoxUP_TSS_washU.bed.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":0,"ncolorscore":-23.691857,"pfilterscore":2,"nfilterscore":-2,"height":50},"metadata":{}},{"type":"interaction","name":"HUVEC_notx_all","url":"https://bioinformatics.uef.fi/biowhat/henri_interactions/HUVEC_TCC1and2_notx_10kbCentered_washU.bed.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":0,"ncolorscore":-23.691857,"pfilterscore":2,"nfilterscore":-2,"height":50},"metadata":{}},{"type":"native_track","list":[{"name":"refGene","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#002EB8"},"metadata":{},"details":{"source":"UCSC Genome Browser","download date":"Jan 1, 2012"}},{"name":"rmsk_all","mode":7,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":35,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"showscoreidx":2,"scorenamelst":["Smith-Waterman score","SW score normalized by length","1-divergence%"],"scorescalelst":[{"type":0},{"type":0},{"type":0}],"metadata":{},"categories":{"1":["SINE - short interspersed nuclear elements","#cc0000"],"2":["LINE - long interspersed nuclear element","#FF6600"],"3":["LTR - long terminal repeat element","#006600"],"4":["DNA transposon","#4A72E8"],"5":["Simple repeat, micro-satellite","#AB833B"],"6":["Satellite repeat","#660000"],"7":["Low complexity repeat","#663333"],"8":["RNA repeat","#cc33ff"],"9":["Other repeats","#488E8E"],"10":["Unknown","#5C5C5C"],"-1":["no information","transparent"]}}]},{"type":"metadata","vocabulary_set":{}},{"type":"coordinate_override","coord":"chr4,177599312,chr4,177892474"}]