[{"type":"categorical","name":"K562_ChIA-PET_motifs","url":"http://bioen-compbio.bioen.illinois.edu/~ywang423/WashU_EpiGenome_Browser/CTCF/data/ChIA-PET_Hi-C/K562_ChIA-PET_motif.category.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{},"categories":{"1":["Loop","rgb(200,0,0)"],"2":["noLoop","rgb(0,0,200)"],"-1":["no information","transparent"]}},{"type":"categorical","name":"K562_Hi-C_motifs","url":"http://bioen-compbio.bioen.illinois.edu/~ywang423/WashU_EpiGenome_Browser/CTCF/data/ChIA-PET_Hi-C/K562_Hi-C_motif.category.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{},"categories":{"1":["Loop","rgb(200,0,0)"],"2":["noLoop","rgb(0,0,200)"],"-1":["no information","transparent"]}},{"type":"categorical","name":"K562_ChIA-PET_Hi-C_merge","url":"http://bioen-compbio.bioen.illinois.edu/~ywang423/WashU_EpiGenome_Browser/CTCF/data/ChIA-PET_Hi-C/K562_ChIA-PET_Hi-C.merge.category.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{},"categories":{"1":["Loop_Loop","rgb(200,0,0)"],"2":["noLoop_noLoop","rgb(0,0,200)"],"3":["Loop_noLoop","rgb(200,200,0)"],"4":["noLoop_Loop","rgb(0,200,200)"],"-1":["no information","transparent"]}},{"type":"interaction","name":"K562_Hi-C_Loops","url":"http://bioen-compbio.bioen.illinois.edu/~ywang423/WashU_EpiGenome_Browser/Hi-C/data/Hi-C/Hi-C_loop/K562_Hi-C.interaction.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":2,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50},"metadata":{}},{"type":"interaction","name":"K562_ChIA-PET_Loops","url":"http://egg.wustl.edu/d/hg19/wgEncodeGisChiaPetK562CtcfInteractionsRep1.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":1,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":2,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50},"metadata":{}},{"type":"native_track","list":[{"name":"rmsk_all","mode":7,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":35,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"showscoreidx":2,"scorenamelst":["Smith-Waterman score","SW score normalized by length","1-divergence%"],"scorescalelst":[{"type":0},{"type":0},{"type":0}],"metadata":{},"categories":{"1":["SINE - short interspersed nuclear elements","#cc0000"],"2":["LINE - long interspersed nuclear element","#FF6600"],"3":["LTR - long terminal repeat element","#006600"],"4":["DNA transposon","#4A72E8"],"5":["Simple repeat, micro-satellite","#AB833B"],"6":["Satellite repeat","#660000"],"7":["Low complexity repeat","#663333"],"8":["RNA repeat","#cc33ff"],"9":["Other repeats","#488E8E"],"10":["Unknown","#5C5C5C"],"-1":["no information","transparent"]}},{"name":"refGene","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#002EB8"},"metadata":{},"details":{"source":"UCSC Genome Browser","download date":"Jan 1, 2012"}}]},{"type":"categorical","name":"vicPac10","url":"http://bioen-compbio.bioen.illinois.edu/~ywang423/WashU_EpiGenome_Browser/CTCF/data/CTCF_motif/vicPac10.category.gz","mode":"hide","qtc":{},"metadata":{},"categories":{"1":["plus_strand","rgb(200,0,0)"],"2":["minus_strand","rgb(0,155,0)"],"-1":["no information","transparent"]}},{"type":"categorical","name":"tupBel1","url":"http://bioen-compbio.bioen.illinois.edu/~ywang423/WashU_EpiGenome_Browser/CTCF/data/CTCF_motif/tupBel1.category.gz","mode":"hide","qtc":{},"metadata":{},"categories":{"1":["plus_strand","rgb(200,0,0)"],"2":["minus_strand","rgb(0,155,0)"],"-1":["no information","transparent"]}},{"type":"categorical","name":"tarSyr1","url":"http://bioen-compbio.bioen.illinois.edu/~ywang423/WashU_EpiGenome_Browser/CTCF/data/CTCF_motif/tarSyr1.category.gz","mode":"hide","qtc":{},"metadata":{},"categories":{"1":["plus_strand","rgb(200,0,0)"],"2":["minus_strand","rgb(0,155,0)"],"-1":["no information","transparent"]}},{"type":"categorical","name":"rheMac2","url":"http://bioen-compbio.bioen.illinois.edu/~ywang423/WashU_EpiGenome_Browser/CTCF/data/CTCF_motif/rheMac2.category.gz","mode":"hide","qtc":{},"metadata":{},"categories":{"1":["plus_strand","rgb(200,0,0)"],"2":["minus_strand","rgb(0,155,0)"],"-1":["no information","transparent"]}},{"type":"categorical","name":"ponAbe2","url":"http://bioen-compbio.bioen.illinois.edu/~ywang423/WashU_EpiGenome_Browser/CTCF/data/CTCF_motif/ponAbe2.category.gz","mode":"hide","qtc":{},"metadata":{},"categories":{"1":["plus_strand","rgb(200,0,0)"],"2":["minus_strand","rgb(0,155,0)"],"-1":["no information","transparent"]}},{"type":"categorical","name":"panTro2","url":"http://bioen-compbio.bioen.illinois.edu/~ywang423/WashU_EpiGenome_Browser/CTCF/data/CTCF_motif/panTro2.category.gz","mode":"hide","qtc":{},"metadata":{},"categories":{"1":["plus_strand","rgb(200,0,0)"],"2":["minus_strand","rgb(0,155,0)"],"-1":["no information","transparent"]}},{"type":"categorical","name":"mm9","url":"http://bioen-compbio.bioen.illinois.edu/~ywang423/WashU_EpiGenome_Browser/CTCF/data/CTCF_motif/mm9.category.gz","mode":"hide","qtc":{},"metadata":{},"categories":{"1":["plus_strand","rgb(200,0,0)"],"2":["minus_strand","rgb(0,155,0)"],"-1":["no information","transparent"]}},{"type":"categorical","name":"micMur1","url":"http://bioen-compbio.bioen.illinois.edu/~ywang423/WashU_EpiGenome_Browser/CTCF/data/CTCF_motif/micMur1.category.gz","mode":"hide","qtc":{},"metadata":{},"categories":{"1":["plus_strand","rgb(200,0,0)"],"2":["minus_strand","rgb(0,155,0)"],"-1":["no information","transparent"]}},{"type":"categorical","name":"loxAfr3","url":"http://bioen-compbio.bioen.illinois.edu/~ywang423/WashU_EpiGenome_Browser/CTCF/data/CTCF_motif/loxAfr3.category.gz","mode":"hide","qtc":{},"metadata":{},"categories":{"1":["plus_strand","rgb(200,0,0)"],"2":["minus_strand","rgb(0,155,0)"],"-1":["no information","transparent"]}},{"type":"categorical","name":"hg19","url":"http://bioen-compbio.bioen.illinois.edu/~ywang423/WashU_EpiGenome_Browser/CTCF/data/CTCF_motif/hg19.category.gz","mode":"hide","qtc":{},"metadata":{},"categories":{"1":["plus_strand","rgb(200,0,0)"],"2":["minus_strand","rgb(0,155,0)"],"-1":["no information","transparent"]}},{"type":"categorical","name":"calJac1","url":"http://bioen-compbio.bioen.illinois.edu/~ywang423/WashU_EpiGenome_Browser/CTCF/data/CTCF_motif/calJac1.category.gz","mode":"hide","qtc":{},"metadata":{},"categories":{"1":["plus_strand","rgb(200,0,0)"],"2":["minus_strand","rgb(0,155,0)"],"-1":["no information","transparent"]}},{"type":"metadata","vocabulary_set":{}},{"type":"coordinate_override","coord":"chr7,17733692,chr7,19654748"}]