[{"type":"categorical","name":"E087 Pancreatic Islets ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E087_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","285","310"],"md2":["13171"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E087 Pancreatic Islets AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E087_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","285"],"md2":["13171"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E087 Pancreatic Islets PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E087_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","285"],"md2":["13171"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"bigwig","name":"Duke DnaseSeq PanIslets","url":"http://egg.wustl.edu/d/hg19/GSM816660_1.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":77,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"rgb(0,53,0)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"metadata":{"md2":["13171"],"md4":["23001"],"md5":["30019"]},"geolst":["GSM816660"]},{"type":"bigwig","name":"Duke DnaseSeq PanIslets","url":"http://egg.wustl.edu/d/hg19/GSM816660_2.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":77,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"rgb(0,53,0)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"metadata":{"md2":["13171"],"md4":["23001"],"md5":["30019"]},"geolst":["GSM816660"]},{"type":"bigwig","name":"UNC FaireSeq PanIslets","url":"http://egg.wustl.edu/d/hg19/GSM864346_1.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"metadata":{"md2":["13171"],"md4":["23003"],"md5":["30022"]},"geolst":["GSM864346"]},{"type":"bigwig","name":"UNC FaireSeq PanIslets","url":"http://egg.wustl.edu/d/hg19/GSM864346_2.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"metadata":{"md2":["13171"],"md4":["23003"],"md5":["30022"]},"geolst":["GSM864346"]},{"type":"bigwig","name":"Duke DnaseSeq PanIsletD","url":"http://egg.wustl.edu/d/hg19/GSM816666_2.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":77,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"rgb(0,53,0)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"metadata":{"md2":["13177"],"md4":["23001"],"md5":["30019"]},"geolst":["GSM816666"]},{"type":"bigwig","name":"Duke DnaseSeq PanIsletD","url":"http://egg.wustl.edu/d/hg19/GSM816666_1.bigWig","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":77,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"rgb(0,53,0)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1},"metadata":{"md2":["13177"],"md4":["23001"],"md5":["30019"]},"geolst":["GSM816666"]},{"type":"bigwig","name":"E087 Pancreatic Islets RNAseq Pos","url":"http://egg2.wustl.edu/roadmap/data/byDataType/rna/signal/normalized_bigwig/stranded/E087.Pancreatic_Islets.norm.pos.bw","mode":1,"qtc":{"anglescale":1,"pr":176,"pg":196,"pb":222,"nr":255,"ng":0,"nb":0,"pth":"rgb(123,137,155)","nth":"#800000","thtype":1,"thmin":0,"thmax":40,"thpercentile":90,"height":20,"summeth":1},"metadata":{"md2":["13171"],"md4":["25002"],"md6":["11","32","285"]}},{"type":"bigwig","name":"E087 Pancreatic Islets RNAseq Neg","url":"http://egg2.wustl.edu/roadmap/data/byDataType/rna/signal/normalized_bigwig/stranded/E087.Pancreatic_Islets.norm.neg.bw","mode":1,"qtc":{"anglescale":1,"pr":176,"pg":196,"pb":222,"nr":176,"ng":196,"nb":222,"pth":"rgb(123,137,155)","nth":"rgb(123,137,155)","thtype":1,"thmin":-40,"thmax":0,"thpercentile":90,"height":20,"summeth":1},"metadata":{"md2":["13171"],"md4":["25002"],"md6":["11","32","285"]}},{"type":"bigwig","name":"E087 Pancreatic Islets H3K9me3 pval signal","url":"http://egg2.wustl.edu/roadmap/data/byFileType/signal/consolidated/macs2signal/pval/E087-H3K9me3.pval.signal.bigwig","mode":1,"qtc":{"anglescale":1,"pr":216,"pg":191,"pb":216,"nr":255,"ng":0,"nb":0,"pth":"rgb(151,133,151)","nth":"#800000","thtype":1,"thmin":2,"thmax":15,"thpercentile":90,"height":20,"summeth":1},"metadata":{"md2":["13171"],"md4":["22012"],"md6":["11","33","285"]}},{"type":"bigwig","name":"E087 Pancreatic Islets H3K4me1 pval signal","url":"http://egg2.wustl.edu/roadmap/data/byFileType/signal/consolidated/macs2signal/pval/E087-H3K4me1.pval.signal.bigwig","mode":1,"qtc":{"anglescale":1,"pr":255,"pg":140,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"rgb(178,98,0)","nth":"#800000","thtype":1,"thmin":2,"thmax":40,"thpercentile":90,"height":20,"summeth":1},"metadata":{"md2":["13171"],"md4":["22010"],"md6":["11","33","285"]}},{"type":"bigwig","name":"E087 Pancreatic Islets H3K9ac pval signal","url":"http://egg2.wustl.edu/roadmap/data/byFileType/signal/consolidated/macs2signal/pval/E087-H3K9ac.pval.signal.bigwig","mode":1,"qtc":{"anglescale":1,"pr":139,"pg":0,"pb":139,"nr":255,"ng":0,"nb":0,"pth":"rgb(97,0,97)","nth":"#800000","thtype":1,"thmin":2,"thmax":40,"thpercentile":90,"height":20,"summeth":1},"metadata":{"md2":["13171"],"md4":["22013"],"md6":["11","33","285"]}},{"type":"bigwig","name":"E087 Pancreatic Islets H3K4me3 pval signal","url":"http://egg2.wustl.edu/roadmap/data/byFileType/signal/consolidated/macs2signal/pval/E087-H3K4me3.pval.signal.bigwig","mode":1,"qtc":{"anglescale":1,"pr":255,"pg":165,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"rgb(178,115,0)","nth":"#800000","thtype":1,"thmin":2,"thmax":40,"thpercentile":90,"height":20,"summeth":1},"metadata":{"md2":["13171"],"md4":["22009"],"md6":["11","33","285"]}},{"type":"bigwig","name":"E087 Pancreatic Islets H3K27me3 pval signal","url":"http://egg2.wustl.edu/roadmap/data/byFileType/signal/consolidated/macs2signal/pval/E087-H3K27me3.pval.signal.bigwig","mode":1,"qtc":{"anglescale":1,"pr":255,"pg":160,"pb":122,"nr":255,"ng":0,"nb":0,"pth":"rgb(178,112,85)","nth":"#800000","thtype":1,"thmin":2,"thmax":15,"thpercentile":90,"height":20,"summeth":1},"metadata":{"md2":["13171"],"md4":["22018"],"md6":["11","33","285"]}},{"type":"bigwig","name":"E087 Pancreatic Islets H3K36me3 pval signal","url":"http://egg2.wustl.edu/roadmap/data/byFileType/signal/consolidated/macs2signal/pval/E087-H3K36me3.pval.signal.bigwig","mode":1,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":255,"nr":255,"ng":0,"nb":0,"pth":"rgb(178,0,178)","nth":"#800000","thtype":1,"thmin":2,"thmax":15,"thpercentile":90,"height":20,"summeth":1},"metadata":{"md2":["13171"],"md4":["22020"],"md6":["11","33","285"]}},{"type":"bigwig","name":"E087 Pancreatic Islets H3K27ac pval signal","url":"http://egg2.wustl.edu/roadmap/data/byFileType/signal/consolidated/macs2signal/pval/E087-H3K27ac.pval.signal.bigwig","mode":1,"qtc":{"anglescale":1,"pr":205,"pg":92,"pb":92,"nr":255,"ng":0,"nb":0,"pth":"rgb(143,64,64)","nth":"#800000","thtype":1,"thmin":2,"thmax":40,"thpercentile":90,"height":20,"summeth":1},"metadata":{"md2":["13171"],"md4":["22019"],"md6":["11","33","285"]}},{"type":"categorical","name":"GM12878 chromatin state","url":"http://egg.wustl.edu/d/hg19/wgEncodeBroadHmmGm12878HMM.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md2":["13047"],"md4":["27004"],"md5":["30003"]},"categories":{"1":["Active promoter","#ff0000"],"2":["Weak promoter","#ff6969"],"3":["Inactive/poised promoter","#cf0bc6"],"4":["Strong enhancer","#faca00"],"5":["Strong enhancer","#faca00"],"6":["Weak enhancer","#fffc04"],"7":["Weak enhancer","#fffc04"],"8":["Insulator","#0abefe"],"9":["Transcriptional transition","#00b050"],"10":["Transcriptional elongation","#00b050"],"11":["Weak transcribed","#99ff66"],"12":["Polycomb-repressed","#7f7f7f"],"13":["Heterochromatin, low signal","#f5f5f5"],"14":["Repetitive/CNV","#f5f5f5"],"15":["Repetitive/CNV","#f5f5f5"],"-1":["no information","transparent"]},"geolst":["GSM936082"]},{"type":"categorical","name":"NHEK chromatin state","url":"http://egg.wustl.edu/d/hg19/wgEncodeBroadHmmNhekHMM.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md2":["13056"],"md4":["27004"],"md5":["30003"]},"categories":{"1":["Active promoter","#ff0000"],"2":["Weak promoter","#ff6969"],"3":["Inactive/poised promoter","#cf0bc6"],"4":["Strong enhancer","#faca00"],"5":["Strong enhancer","#faca00"],"6":["Weak enhancer","#fffc04"],"7":["Weak enhancer","#fffc04"],"8":["Insulator","#0abefe"],"9":["Transcriptional transition","#00b050"],"10":["Transcriptional elongation","#00b050"],"11":["Weak transcribed","#99ff66"],"12":["Polycomb-repressed","#7f7f7f"],"13":["Heterochromatin, low signal","#f5f5f5"],"14":["Repetitive/CNV","#f5f5f5"],"15":["Repetitive/CNV","#f5f5f5"],"-1":["no information","transparent"]},"geolst":["GSM936087"]},{"type":"categorical","name":"NHLF chromatin state","url":"http://egg.wustl.edu/d/hg19/wgEncodeBroadHmmNhlfHMM.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md2":["13057"],"md4":["27004"],"md5":["30003"]},"categories":{"1":["Active promoter","#ff0000"],"2":["Weak promoter","#ff6969"],"3":["Inactive/poised promoter","#cf0bc6"],"4":["Strong enhancer","#faca00"],"5":["Strong enhancer","#faca00"],"6":["Weak enhancer","#fffc04"],"7":["Weak enhancer","#fffc04"],"8":["Insulator","#0abefe"],"9":["Transcriptional transition","#00b050"],"10":["Transcriptional elongation","#00b050"],"11":["Weak transcribed","#99ff66"],"12":["Polycomb-repressed","#7f7f7f"],"13":["Heterochromatin, low signal","#f5f5f5"],"14":["Repetitive/CNV","#f5f5f5"],"15":["Repetitive/CNV","#f5f5f5"],"-1":["no information","transparent"]},"geolst":["GSM936086"]},{"type":"categorical","name":"HMEC chromatin state","url":"http://egg.wustl.edu/d/hg19/wgEncodeBroadHmmHmecHMM.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md2":["13049"],"md4":["27004"],"md5":["30003"]},"categories":{"1":["Active promoter","#ff0000"],"2":["Weak promoter","#ff6969"],"3":["Inactive/poised promoter","#cf0bc6"],"4":["Strong enhancer","#faca00"],"5":["Strong enhancer","#faca00"],"6":["Weak enhancer","#fffc04"],"7":["Weak enhancer","#fffc04"],"8":["Insulator","#0abefe"],"9":["Transcriptional transition","#00b050"],"10":["Transcriptional elongation","#00b050"],"11":["Weak transcribed","#99ff66"],"12":["Polycomb-repressed","#7f7f7f"],"13":["Heterochromatin, low signal","#f5f5f5"],"14":["Repetitive/CNV","#f5f5f5"],"15":["Repetitive/CNV","#f5f5f5"],"-1":["no information","transparent"]},"geolst":["GSM936084"]},{"type":"categorical","name":"HEPG2 chromatin state","url":"http://egg.wustl.edu/d/hg19/wgEncodeBroadHmmHepg2HMM.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md2":["13048"],"md4":["27004"],"md5":["30003"]},"categories":{"1":["Active promoter","#ff0000"],"2":["Weak promoter","#ff6969"],"3":["Inactive/poised promoter","#cf0bc6"],"4":["Strong enhancer","#faca00"],"5":["Strong enhancer","#faca00"],"6":["Weak enhancer","#fffc04"],"7":["Weak enhancer","#fffc04"],"8":["Insulator","#0abefe"],"9":["Transcriptional transition","#00b050"],"10":["Transcriptional elongation","#00b050"],"11":["Weak transcribed","#99ff66"],"12":["Polycomb-repressed","#7f7f7f"],"13":["Heterochromatin, low signal","#f5f5f5"],"14":["Repetitive/CNV","#f5f5f5"],"15":["Repetitive/CNV","#f5f5f5"],"-1":["no information","transparent"]},"geolst":["GSM936090"]},{"type":"categorical","name":"HUVEC chromatin state","url":"http://egg.wustl.edu/d/hg19/wgEncodeBroadHmmHuvecHMM.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md2":["13052"],"md4":["27004"],"md5":["30003"]},"categories":{"1":["Active promoter","#ff0000"],"2":["Weak promoter","#ff6969"],"3":["Inactive/poised promoter","#cf0bc6"],"4":["Strong enhancer","#faca00"],"5":["Strong enhancer","#faca00"],"6":["Weak enhancer","#fffc04"],"7":["Weak enhancer","#fffc04"],"8":["Insulator","#0abefe"],"9":["Transcriptional transition","#00b050"],"10":["Transcriptional elongation","#00b050"],"11":["Weak transcribed","#99ff66"],"12":["Polycomb-repressed","#7f7f7f"],"13":["Heterochromatin, low signal","#f5f5f5"],"14":["Repetitive/CNV","#f5f5f5"],"15":["Repetitive/CNV","#f5f5f5"],"-1":["no information","transparent"]},"geolst":["GSM936089"]},{"type":"categorical","name":"HSMM chromatin state","url":"http://egg.wustl.edu/d/hg19/wgEncodeBroadHmmHsmmHMM.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md2":["13050"],"md4":["27004"],"md5":["30003"]},"categories":{"1":["Active promoter","#ff0000"],"2":["Weak promoter","#ff6969"],"3":["Inactive/poised promoter","#cf0bc6"],"4":["Strong enhancer","#faca00"],"5":["Strong enhancer","#faca00"],"6":["Weak enhancer","#fffc04"],"7":["Weak enhancer","#fffc04"],"8":["Insulator","#0abefe"],"9":["Transcriptional transition","#00b050"],"10":["Transcriptional elongation","#00b050"],"11":["Weak transcribed","#99ff66"],"12":["Polycomb-repressed","#7f7f7f"],"13":["Heterochromatin, low signal","#f5f5f5"],"14":["Repetitive/CNV","#f5f5f5"],"15":["Repetitive/CNV","#f5f5f5"],"-1":["no information","transparent"]},"geolst":["GSM936085"]},{"type":"categorical","name":"E094 Gastric ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E094_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","292","310"],"md2":["13215"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E066 Liver ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E066_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","264","310"],"md2":["13010"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E077 Duodenum Mucosa PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E077_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","275"],"md2":["13163"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E030 Primary neutrophils from peripheral blood ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E030_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","230","310"],"md2":["13029"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E069 Brain Cingulate Gyrus PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E069_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","267"],"md2":["13041"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E121 HSMM cell derived Skeletal Muscle Myotubes Cells ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E121_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2119"],"md2":["13051"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E072 Brain Inferior Temporal Lobe ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E072_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","270","310"],"md2":["13043"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E044 Primary T regulatory cells from peripheral blood PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E044_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","244"],"md2":["13154"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E046 Primary Natural Killer cells from peripheral blood PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E046_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","246"],"md2":["13037"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E097 Ovary AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E097_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","295"],"md2":["13302"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E063 Adipose Nuclei PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E063_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","262"],"md2":["13013"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E107 Skeletal Muscle Male ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E107_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2105"],"md2":["13003"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E108 Skeletal Muscle Female ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E108_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2106"],"md2":["13003"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E040 Primary T helper memory cells from peripheral blood 1 AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E040_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","240"],"md2":["13150"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E062 Primary mononuclear cells from peripheral blood ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E062_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","261","310"],"md2":["13018"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E105 Right Ventricle ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E105_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2103"],"md2":["13214"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E101 Rectal Mucosa Donor 29 AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E101_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","299"],"md2":["13015"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E102 Rectal Mucosa Donor 31 AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E102_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2100"],"md2":["13015"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E121 HSMM cell derived Skeletal Muscle Myotubes Cells PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E121_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2119"],"md2":["13051"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E113 Spleen PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E113_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2111"],"md2":["13205"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E107 Skeletal Muscle Male PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E107_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2105"],"md2":["13003"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E108 Skeletal Muscle Female PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E108_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2106"],"md2":["13003"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E096 Lung PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E096_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","294"],"md2":["13301"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E106 Sigmoid Colon ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E106_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2104"],"md2":["13213"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E026 Bone Marrow Derived Cultured Mesenchymal Stem Cells ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E026_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","226","310"],"md2":["13011"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E119 HMEC Mammary Epithelial Primary Cells ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E119_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2117"],"md2":["13049"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E077 Duodenum Mucosa ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E077_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","275","310"],"md2":["13163"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E063 Adipose Nuclei AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E063_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","262"],"md2":["13013"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E053 Cortex derived primary cultured neurospheres PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E053_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","253"],"md2":["13033"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E097 Ovary PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E097_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","295"],"md2":["13302"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E051 Primary hematopoietic stem cells G-CSF-mobilized Male PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E051_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","251"],"md2":["13023"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E050 Primary hematopoietic stem cells G-CSF-mobilized Female PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E050_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","250"],"md2":["13023"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E033 Primary T cells from cord blood PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E033_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","233"],"md2":["13022"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E034 Primary T cells from peripheral blood PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E034_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","234"],"md2":["13022"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E045 Primary T cells effector/memory enriched from peripheral blood PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E045_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","245"],"md2":["13152"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E050 Primary hematopoietic stem cells G-CSF-mobilized Female ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E050_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","250","310"],"md2":["13023"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E051 Primary hematopoietic stem cells G-CSF-mobilized Male ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E051_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","251","310"],"md2":["13023"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E035 Primary hematopoietic stem cells PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E035_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","235"],"md2":["13019"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E029 Primary monocytes from peripheral blood PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E029_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","229"],"md2":["13099"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E065 Aorta AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E065_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","263"],"md2":["13217"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E073 Brain_Dorsolateral_Prefrontal_Cortex ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E073_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","271","310"],"md2":["13044"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E045 Primary T cells effector/memory enriched from peripheral blood ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E045_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","245","310"],"md2":["13152"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E104 Right Atrium ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E104_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2102"],"md2":["13211"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E029 Primary monocytes from peripheral blood AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E029_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","229"],"md2":["13099"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E043 Primary T helper cells from peripheral blood ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E043_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","243","310"],"md2":["13157"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E109 Small Intestine PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E109_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2107"],"md2":["13207"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E076 Colon Smooth Muscle ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E076_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","274","310"],"md2":["13147"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E037 Primary T helper memory cells from peripheral blood 2 PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E037_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","237"],"md2":["13020"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E048 Primary T CD8+ memory cells from peripheral blood ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E048_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","248","310"],"md2":["13153"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E128 NHLF Lung Fibroblast Primary Cells AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E128_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2126"],"md2":["13057"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E028 Breast variant Human Mammary Epithelial Cells (vHMEC) ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E028_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","228","310"],"md2":["13007"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E041 Primary T helper cells PMA-I stimulated ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E041_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","241","310"],"md2":["13300"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E069 Brain Cingulate Gyrus ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E069_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","267","310"],"md2":["13041"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E027 Breast Myoepithelial Primary Cells ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E027_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","227","310"],"md2":["13005"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E025 Adipose Derived Mesenchymal Stem Cell Cultured Cells PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E025_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","225"],"md2":["11315"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E042 Primary T helper 17 cells PMA-I stimulated ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E042_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","242","310"],"md2":["13151"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E073 Brain_Dorsolateral_Prefrontal_Cortex AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E073_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","271"],"md2":["13044"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E034 Primary T cells from peripheral blood AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E034_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","234"],"md2":["13022"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E053 Cortex derived primary cultured neurospheres ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E053_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","253","310"],"md2":["13033"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E129 Osteoblast Primary Cells AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E129_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2127"],"md2":["13058"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E129 Osteoblast Primary Cells PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E129_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2127"],"md2":["13058"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E076 Colon Smooth Muscle AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E076_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","274"],"md2":["13147"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E116 GM12878 Lymphoblastoid Cells AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E116_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2114"],"md2":["13047"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E029 Primary monocytes from peripheral blood ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E029_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","229","310"],"md2":["13099"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E122 HUVEC Umbilical Vein Endothelial Primary Cells AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E122_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2120"],"md2":["13052"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E043 Primary T helper cells from peripheral blood AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E043_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","243"],"md2":["13157"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E065 Aorta ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E065_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","263","310"],"md2":["13217"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E046 Primary Natural Killer cells from peripheral blood ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E046_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","246","310"],"md2":["13037"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E036 Primary hematopoietic stem cells short term culture ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E036_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","236","310"],"md2":["13046"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E039 Primary T helper naive cells from peripheral blood ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E039_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","239","310"],"md2":["13149"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E112 Thymus ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E112_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2110"],"md2":["13303"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E100 Psoas Muscle PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E100_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","298"],"md2":["13218"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E102 Rectal Mucosa Donor 31 ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E102_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2100"],"md2":["13015"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E101 Rectal Mucosa Donor 29 ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E101_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","299","310"],"md2":["13015"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E040 Primary T helper memory cells from peripheral blood 1 ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E040_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","240","310"],"md2":["13150"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E095 Left Ventricle PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E095_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","293"],"md2":["13210"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E069 Brain Cingulate Gyrus AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E069_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","267"],"md2":["13041"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E031 Primary B cells from cord blood ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E031_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","231","310"],"md2":["13028"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E032 Primary B cells from peripheral blood ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E032_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","232","310"],"md2":["13028"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E104 Right Atrium PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E104_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2102"],"md2":["13211"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E036 Primary hematopoietic stem cells short term culture PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E036_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","236"],"md2":["13046"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E052 Muscle Satellite Cultured Cells ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E052_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","252","310"],"md2":["13001"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E111 Stomach Smooth Muscle ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E111_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2109"],"md2":["13002"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E118 HepG2 Hepatocellular Carcinoma Cell Line ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E118_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2116"],"md2":["13048"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E078 Duodenum Smooth Muscle PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E078_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","276"],"md2":["13162"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E050 Primary hematopoietic stem cells G-CSF-mobilized Female AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E050_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","250"],"md2":["13023"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E035 Primary hematopoietic stem cells ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E035_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","235","310"],"md2":["13019"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E068 Brain Anterior Caudate PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E068_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","266"],"md2":["13040"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E079 Esophagus AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E079_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","277"],"md2":["13216"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E038 Primary T helper naive cells from peripheral blood ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E038_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","238","310"],"md2":["13025"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E094 Gastric AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E094_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","292"],"md2":["13215"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E127 NHEK-Epidermal Keratinocyte Primary Cells PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E127_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2125"],"md2":["13056"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E110 Stomach Mucosa PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E110_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2108"],"md2":["13146"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E030 Primary neutrophils from peripheral blood PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E030_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","230"],"md2":["13029"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E098 Pancreas ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E098_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","296","310"],"md2":["13208"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E128 NHLF Lung Fibroblast Primary Cells ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E128_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2126"],"md2":["13057"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E039 Primary T helper naive cells from peripheral blood PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E039_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","239"],"md2":["13149"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E042 Primary T helper 17 cells PMA-I stimulated AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E042_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","242"],"md2":["13151"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E106 Sigmoid Colon PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E106_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2104"],"md2":["13213"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E122 HUVEC Umbilical Vein Endothelial Primary Cells PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E122_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2120"],"md2":["13052"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E120 HSMM Skeletal Muscle Myoblasts Cells PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E120_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2118"],"md2":["13050"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E111 Stomach Smooth Muscle PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E111_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2109"],"md2":["13002"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E025 Adipose Derived Mesenchymal Stem Cell Cultured Cells ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E025_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","225","310"],"md2":["11315"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E098 Pancreas PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E098_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","296"],"md2":["13208"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E126 NHDF-Ad Adult Dermal Fibroblast Primary Cells PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E126_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2124"],"md2":["13055"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E032 Primary B cells from peripheral blood AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E032_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","232"],"md2":["13028"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E041 Primary T helper cells PMA-I stimulated PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E041_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","241"],"md2":["13300"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E070 Brain Germinal Matrix PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E070_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","268"],"md2":["13155"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E047 Primary T CD8+ naive cells from peripheral blood ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E047_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","247","310"],"md2":["13021"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E026 Bone Marrow Derived Cultured Mesenchymal Stem Cells AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E026_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","226"],"md2":["13011"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E105 Right Ventricle PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E105_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2103"],"md2":["13214"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E119 HMEC Mammary Epithelial Primary Cells AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E119_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2117"],"md2":["13049"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E106 Sigmoid Colon AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E106_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2104"],"md2":["13213"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E037 Primary T helper memory cells from peripheral blood 2 ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E037_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","237","310"],"md2":["13020"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E104 Right Atrium AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E104_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2102"],"md2":["13211"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E067 Brain Angular Gyrus PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E067_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","265"],"md2":["13160"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E044 Primary T regulatory cells from peripheral blood ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E044_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","244","310"],"md2":["13154"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E066 Liver PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E066_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","264"],"md2":["13010"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E100 Psoas Muscle ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E100_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","298","310"],"md2":["13218"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E112 Thymus AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E112_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2110"],"md2":["13303"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E127 NHEK-Epidermal Keratinocyte Primary Cells ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E127_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2125"],"md2":["13056"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E054 Ganglion Eminence derived primary cultured neurospheres ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E054_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","254","310"],"md2":["13031"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E125 NH-A Astrocytes Primary Cells PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E125_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2123"],"md2":["13054"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E124 Monocytes-CD14+ RO01746 Primary Cells PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E124_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2122"],"md2":["13068"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E111 Stomach Smooth Muscle AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E111_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2109"],"md2":["13002"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E116 GM12878 Lymphoblastoid Cells PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E116_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2114"],"md2":["13047"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E065 Aorta PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E065_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","263"],"md2":["13217"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E066 Liver AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E066_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","264"],"md2":["13010"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E062 Primary mononuclear cells from peripheral blood PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E062_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","261"],"md2":["13018"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E038 Primary T helper naive cells from peripheral blood PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E038_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","238"],"md2":["13025"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E122 HUVEC Umbilical Vein Endothelial Primary Cells ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E122_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2120"],"md2":["13052"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E129 Osteoblast Primary Cells ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E129_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2127"],"md2":["13058"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E120 HSMM Skeletal Muscle Myoblasts Cells AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E120_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2118"],"md2":["13050"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E075 Colonic Mucosa ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E075_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","273","310"],"md2":["13014"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E096 Lung AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E096_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","294"],"md2":["13301"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E103 Rectal Smooth Muscle AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E103_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2101"],"md2":["13004"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E034 Primary T cells from peripheral blood ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E034_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","234","310"],"md2":["13022"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E033 Primary T cells from cord blood ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E033_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","233","310"],"md2":["13022"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E074 Brain Substantia Nigra AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E074_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","272"],"md2":["13045"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E119 HMEC Mammary Epithelial Primary Cells PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E119_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2117"],"md2":["13049"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E118 HepG2 Hepatocellular Carcinoma Cell Line AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E118_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2116"],"md2":["13048"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E124 Monocytes-CD14+ RO01746 Primary Cells AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E124_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2122"],"md2":["13068"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E100 Psoas Muscle AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E100_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","298"],"md2":["13218"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E095 Left Ventricle ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E095_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","293","310"],"md2":["13210"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E027 Breast Myoepithelial Primary Cells PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E027_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","227"],"md2":["13005"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E054 Ganglion Eminence derived primary cultured neurospheres PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E054_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","254"],"md2":["13031"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E108 Skeletal Muscle Female AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E108_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2106"],"md2":["13003"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E048 Primary T CD8+ memory cells from peripheral blood AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E048_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","248"],"md2":["13153"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E074 Brain Substantia Nigra PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E074_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","272"],"md2":["13045"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E113 Spleen ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E113_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2111"],"md2":["13205"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E039 Primary T helper naive cells from peripheral blood AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E039_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","239"],"md2":["13149"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E075 Colonic Mucosa AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E075_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","273"],"md2":["13014"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E121 HSMM cell derived Skeletal Muscle Myotubes Cells AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E121_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2119"],"md2":["13051"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E047 Primary T CD8+ naive cells from peripheral blood PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E047_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","247"],"md2":["13021"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E109 Small Intestine AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E109_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2107"],"md2":["13207"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E128 NHLF Lung Fibroblast Primary Cells PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E128_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2126"],"md2":["13057"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E095 Left Ventricle AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E095_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","293"],"md2":["13210"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E072 Brain Inferior Temporal Lobe PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E072_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","270"],"md2":["13043"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E041 Primary T helper cells PMA-I stimulated AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E041_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","241"],"md2":["13300"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E046 Primary Natural Killer cells from peripheral blood AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E046_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","246"],"md2":["13037"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E042 Primary T helper 17 cells PMA-I stimulated PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E042_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","242"],"md2":["13151"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E068 Brain Anterior Caudate AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E068_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","266"],"md2":["13040"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E097 Ovary ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E097_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","295","310"],"md2":["13302"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E031 Primary B cells from cord blood PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E031_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","231"],"md2":["13028"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E032 Primary B cells from peripheral blood PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E032_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","232"],"md2":["13028"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E063 Adipose Nuclei ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E063_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","262","310"],"md2":["13013"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E120 HSMM Skeletal Muscle Myoblasts Cells ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E120_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2118"],"md2":["13050"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E026 Bone Marrow Derived Cultured Mesenchymal Stem Cells PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E026_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","226"],"md2":["13011"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E101 Rectal Mucosa Donor 29 PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E101_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","299"],"md2":["13015"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E102 Rectal Mucosa Donor 31 PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E102_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2100"],"md2":["13015"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E094 Gastric PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E094_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","292"],"md2":["13215"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E105 Right Ventricle AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E105_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2103"],"md2":["13214"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E096 Lung ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E096_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","294","310"],"md2":["13301"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E103 Rectal Smooth Muscle ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E103_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2101"],"md2":["13004"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E062 Primary mononuclear cells from peripheral blood AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E062_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","261"],"md2":["13018"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E126 NHDF-Ad Adult Dermal Fibroblast Primary Cells AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E126_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2124"],"md2":["13055"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E028 Breast variant Human Mammary Epithelial Cells (vHMEC) PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E028_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","228"],"md2":["13007"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E076 Colon Smooth Muscle PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E076_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","274"],"md2":["13147"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E118 HepG2 Hepatocellular Carcinoma Cell Line PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E118_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2116"],"md2":["13048"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E124 Monocytes-CD14+ RO01746 Primary Cells ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E124_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2122"],"md2":["13068"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E110 Stomach Mucosa ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E110_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2108"],"md2":["13146"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E047 Primary T CD8+ naive cells from peripheral blood AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E047_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","247"],"md2":["13021"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E079 Esophagus ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E079_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","277","310"],"md2":["13216"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E068 Brain Anterior Caudate ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E068_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","266","310"],"md2":["13040"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E112 Thymus PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E112_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2110"],"md2":["13303"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E040 Primary T helper memory cells from peripheral blood 1 PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E040_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","240"],"md2":["13150"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E071 Brain Hippocampus Middle PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E071_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","269"],"md2":["13042"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E116 GM12878 Lymphoblastoid Cells ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E116_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2114"],"md2":["13047"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E048 Primary T CD8+ memory cells from peripheral blood PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E048_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","248"],"md2":["13153"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E126 NHDF-Ad Adult Dermal Fibroblast Primary Cells ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E126_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2124"],"md2":["13055"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E125 NH-A Astrocytes Primary Cells AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E125_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2123"],"md2":["13054"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E079 Esophagus PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E079_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","277"],"md2":["13216"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E103 Rectal Smooth Muscle PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E103_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","2101"],"md2":["13004"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E052 Muscle Satellite Cultured Cells PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E052_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","252"],"md2":["13001"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E067 Brain Angular Gyrus ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E067_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","265","310"],"md2":["13160"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E074 Brain Substantia Nigra ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E074_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","272","310"],"md2":["13045"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E078 Duodenum Smooth Muscle ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E078_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","276","310"],"md2":["13162"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E073 Brain_Dorsolateral_Prefrontal_Cortex PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E073_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","271"],"md2":["13044"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E078 Duodenum Smooth Muscle AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E078_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","276"],"md2":["13162"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E037 Primary T helper memory cells from peripheral blood 2 AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E037_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","237"],"md2":["13020"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E072 Brain Inferior Temporal Lobe AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E072_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","270"],"md2":["13043"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E070 Brain Germinal Matrix ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E070_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","268","310"],"md2":["13155"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E067 Brain Angular Gyrus AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E067_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","265"],"md2":["13160"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E125 NH-A Astrocytes Primary Cells ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E125_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2123"],"md2":["13054"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E113 Spleen AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E113_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2111"],"md2":["13205"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E045 Primary T cells effector/memory enriched from peripheral blood AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E045_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","245"],"md2":["13152"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E043 Primary T helper cells from peripheral blood PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E043_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","243"],"md2":["13157"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E127 NHEK-Epidermal Keratinocyte Primary Cells AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E127_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","2125"],"md2":["13056"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E075 Colonic Mucosa PrimaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/E075_15_coreMarks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","38","273"],"md2":["13014"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E109 Small Intestine ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E109_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","310","2107"],"md2":["13207"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E071 Brain Hippocampus Middle ImputedHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/imputed12marks/jointModel/final/E071_25_imputed12marks_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["12","269","310"],"md2":["13042"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Promoter Upstream TSS","#ff4500"],"3":["Promoter Downstream TSS with DNase","#ff4500"],"4":["Promoter Downstream TSS","#ff4500"],"5":["Transcription 5'","#008000"],"6":["Transcription","#008000"],"7":["Transcription 3'","#008000"],"8":["Weak transcription","#009600"],"9":["Transcription Regulatory","#c2e105"],"10":["Transcription 5' Enhancer","#c2e105"],"11":["Transcription 3' Enhancer","#c2e105"],"12":["Transcription Weak Enhancer","#c2e105"],"13":["Active Enhancer 1","#ffc34d"],"14":["Active Enhancer 2","#ffc34d"],"15":["Active Enhancer Flank","#ffc34d"],"16":["Weak Enhancer 1","#ffff00"],"17":["Weak Enhancer 2","#ffff00"],"18":["Enhancer Acetylation Only","#ffff00"],"19":["DNase only","#ffff66"],"20":["ZNF genes & repeats","#66cdaa"],"21":["Heterochromatin","#8a91d0"],"22":["Poised Promoter","#e6b8b7"],"23":["Bivalent Promoter","#7030a0"],"24":["Repressed PolyComb","#808080"],"25":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E044 Primary T regulatory cells from peripheral blood AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E044_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","244"],"md2":["13154"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E038 Primary T helper naive cells from peripheral blood AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E038_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","238"],"md2":["13025"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E098 Pancreas AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E098_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","296"],"md2":["13208"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"categorical","name":"E071 Brain Hippocampus Middle AuxiliaryHMM","url":"http://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E071_18_core_K27ac_stateno.bed.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11","39","269"],"md2":["13042"],"md4":["27004"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking TSS","#ff4500"],"3":["Flanking TSS Upstream","#ff4500"],"4":["Flanking TSS Downstream","#ff4500"],"5":["Strong transcription","#008000"],"6":["Weak transcription","#006400"],"7":["Genic enhancer1","#c2e105"],"8":["Genic enhancer2","#c2e105"],"9":["Active Enhancer1","#ffc34d"],"10":["Active Enhancer2","#ffc34d"],"11":["Weak Enhancer","#ffff00"],"12":["ZNF genes & repeats","#66cdaa"],"13":["Heterochromatin","#8a91d0"],"14":["Bivalent/Poised TSS","#cd5c5c"],"15":["Bivalent Enhancer","#bdb76b"],"16":["Repressed PolyComb","#808080"],"17":["Weak Repressed PolyComb","#c0c0c0"],"18":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"type":"native_track","list":[{"name":"rmsk_all","mode":7,"qtc":{"anglescale":1,"pr":0,"pg":77,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":35,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"showscoreidx":2,"scorenamelst":["Smith-Waterman score","SW score normalized by length","1-divergence%"],"scorescalelst":[{"type":0},{"type":0},{"type":0}],"metadata":{},"categories":{"1":["SINE - short interspersed nuclear elements","#cc0000"],"2":["LINE - long interspersed nuclear element","#FF6600"],"3":["LTR - long terminal repeat element","#006600"],"4":["DNA transposon","#4A72E8"],"5":["Simple repeat, micro-satellite","#AB833B"],"6":["Satellite repeat","#660000"],"7":["Low complexity repeat","#663333"],"8":["RNA repeat","#cc33ff"],"9":["Other repeats","#488E8E"],"10":["Unknown","#5C5C5C"],"-1":["no information","transparent"]}},{"name":"refGene","mode":3,"qtc":{"anglescale":1,"pr":0,"pg":77,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#002EB8"},"metadata":{},"details":{"source":"UCSC Genome Browser","download date":"Jan 1, 2012"}}]},{"type":"metadata","vocabulary_set":{"md1":{"terms":{"11":["Real"],"12":["Imputed"],"21":["E001"],"22":["E002"],"23":["E003"],"24":["E004"],"25":["E005"],"26":["E006"],"27":["E007"],"28":["E008"],"29":["E009"],"31":["Alignment"],"32":["Signal"],"33":["macs2signal_pval"],"34":["macs2signal_foldChange"],"35":["narrowPeak"],"36":["broadPeak"],"37":["gappedPeak"],"38":["PrimaryHMM"],"39":["AuxiliaryHMM"],"210":["E010"],"211":["E011"],"212":["E012"],"213":["E013"],"214":["E014"],"215":["E015"],"216":["E016"],"217":["E017"],"218":["E018"],"219":["E019"],"220":["E020"],"221":["E021"],"222":["E022"],"223":["E023"],"224":["E024"],"225":["E025"],"226":["E026"],"227":["E027"],"228":["E028"],"229":["E029"],"230":["E030"],"231":["E031"],"232":["E032"],"233":["E033"],"234":["E034"],"235":["E035"],"236":["E036"],"237":["E037"],"238":["E038"],"239":["E039"],"240":["E040"],"241":["E041"],"242":["E042"],"243":["E043"],"244":["E044"],"245":["E045"],"246":["E046"],"247":["E047"],"248":["E048"],"249":["E049"],"250":["E050"],"251":["E051"],"252":["E052"],"253":["E053"],"254":["E054"],"255":["E055"],"256":["E056"],"257":["E057"],"258":["E058"],"259":["E059"],"260":["E061"],"261":["E062"],"262":["E063"],"263":["E065"],"264":["E066"],"265":["E067"],"266":["E068"],"267":["E069"],"268":["E070"],"269":["E071"],"270":["E072"],"271":["E073"],"272":["E074"],"273":["E075"],"274":["E076"],"275":["E077"],"276":["E078"],"277":["E079"],"278":["E080"],"279":["E081"],"280":["E082"],"281":["E083"],"282":["E084"],"283":["E085"],"284":["E086"],"285":["E087"],"286":["E088"],"287":["E089"],"288":["E090"],"289":["E091"],"290":["E092"],"291":["E093"],"292":["E094"],"293":["E095"],"294":["E096"],"295":["E097"],"296":["E098"],"297":["E099"],"298":["E100"],"299":["E101"],"310":["ImputedHMM"],"2100":["E102"],"2101":["E103"],"2102":["E104"],"2103":["E105"],"2104":["E106"],"2105":["E107"],"2106":["E108"],"2107":["E109"],"2108":["E110"],"2109":["E111"],"2110":["E112"],"2111":["E113"],"2112":["E114"],"2113":["E115"],"2114":["E116"],"2115":["E117"],"2116":["E118"],"2117":["E119"],"2118":["E120"],"2119":["E121"],"2120":["E122"],"2121":["E123"],"2122":["E124"],"2123":["E125"],"2124":["E126"],"2125":["E127"],"2126":["E128"],"2127":["E129"]},"vocabulary":{"Type":["11","12"],"EID":["21","22","23","24","25","26","27","28","29","210","211","212","213","214","215","216","217","218","219","220","221","222","223","224","225","226","227","228","229","230","231","232","233","234","235","236","237","238","239","240","241","242","243","244","245","246","247","248","249","250","251","252","253","254","255","256","257","258","259","260","261","262","263","264","265","266","267","268","269","270","271","272","273","274","275","276","277","278","279","280","281","282","283","284","285","286","287","288","289","290","291","292","293","294","295","296","297","298","299","2100","2101","2102","2103","2104","2105","2106","2107","2108","2109","2110","2111","2112","2113","2114","2115","2116","2117","2118","2119","2120","2121","2122","2123","2124","2125","2126","2127"],"View":["31","32","33","34","35","36","37","38","39","310"]},"source":"http://vizhub.wustl.edu/public/hg19/roadmap_consolidated_02182015.json.md.hmm"},"md2":"http://vizhub.wustl.edu/metadata/human/Samples","md3":"http://vizhub.wustl.edu/metadata/human/Donor","md4":"http://vizhub.wustl.edu/metadata/Experimental_assays","md5":"http://vizhub.wustl.edu/metadata/Institutions","md6":{"terms":{"11":["Real"],"12":["Imputed"],"21":["E001"],"22":["E002"],"23":["E003"],"24":["E004"],"25":["E005"],"26":["E006"],"27":["E007"],"28":["E008"],"29":["E009"],"31":["Alignment"],"32":["Signal"],"33":["macs2signal_pval"],"34":["macs2signal_foldChange"],"35":["narrowPeak"],"36":["broadPeak"],"37":["gappedPeak"],"38":["PrimaryHMM"],"39":["AuxiliaryHMM"],"210":["E010"],"211":["E011"],"212":["E012"],"213":["E013"],"214":["E014"],"215":["E015"],"216":["E016"],"217":["E017"],"218":["E018"],"219":["E019"],"220":["E020"],"221":["E021"],"222":["E022"],"223":["E023"],"224":["E024"],"225":["E025"],"226":["E026"],"227":["E027"],"228":["E028"],"229":["E029"],"230":["E030"],"231":["E031"],"232":["E032"],"233":["E033"],"234":["E034"],"235":["E035"],"236":["E036"],"237":["E037"],"238":["E038"],"239":["E039"],"240":["E040"],"241":["E041"],"242":["E042"],"243":["E043"],"244":["E044"],"245":["E045"],"246":["E046"],"247":["E047"],"248":["E048"],"249":["E049"],"250":["E050"],"251":["E051"],"252":["E052"],"253":["E053"],"254":["E054"],"255":["E055"],"256":["E056"],"257":["E057"],"258":["E058"],"259":["E059"],"260":["E061"],"261":["E062"],"262":["E063"],"263":["E065"],"264":["E066"],"265":["E067"],"266":["E068"],"267":["E069"],"268":["E070"],"269":["E071"],"270":["E072"],"271":["E073"],"272":["E074"],"273":["E075"],"274":["E076"],"275":["E077"],"276":["E078"],"277":["E079"],"278":["E080"],"279":["E081"],"280":["E082"],"281":["E083"],"282":["E084"],"283":["E085"],"284":["E086"],"285":["E087"],"286":["E088"],"287":["E089"],"288":["E090"],"289":["E091"],"290":["E092"],"291":["E093"],"292":["E094"],"293":["E095"],"294":["E096"],"295":["E097"],"296":["E098"],"297":["E099"],"298":["E100"],"299":["E101"],"310":["ImputedHMM"],"2100":["E102"],"2101":["E103"],"2102":["E104"],"2103":["E105"],"2104":["E106"],"2105":["E107"],"2106":["E108"],"2107":["E109"],"2108":["E110"],"2109":["E111"],"2110":["E112"],"2111":["E113"],"2112":["E114"],"2113":["E115"],"2114":["E116"],"2115":["E117"],"2116":["E118"],"2117":["E119"],"2118":["E120"],"2119":["E121"],"2120":["E122"],"2121":["E123"],"2122":["E124"],"2123":["E125"],"2124":["E126"],"2125":["E127"],"2126":["E128"],"2127":["E129"]},"vocabulary":{"Type":["11","12"],"EID":["21","22","23","24","25","26","27","28","29","210","211","212","213","214","215","216","217","218","219","220","221","222","223","224","225","226","227","228","229","230","231","232","233","234","235","236","237","238","239","240","241","242","243","244","245","246","247","248","249","250","251","252","253","254","255","256","257","258","259","260","261","262","263","264","265","266","267","268","269","270","271","272","273","274","275","276","277","278","279","280","281","282","283","284","285","286","287","288","289","290","291","292","293","294","295","296","297","298","299","2100","2101","2102","2103","2104","2105","2106","2107","2108","2109","2110","2111","2112","2113","2114","2115","2116","2117","2118","2119","2120","2121","2122","2123","2124","2125","2126","2127"],"View":["31","32","33","34","35","36","37","38","39","310"]},"source":"http://vizhub.wustl.edu/public/hg19/roadmap_consolidated_02182015.json.md.pvalsig"}},"show_terms":{"md2":["Sample"],"md4":["Assay"],"md1":["View","Type"],"md6":["View","Type"]}},{"type":"coordinate_override","coord":"chr7,27053398,chr7,27373766"}]