[{"type":"bedgraph","name":"Fetal Brain methylCRF","url":"http://remc.wustl.edu/dli/mCRF/E081.fm.bedGraph.gz","mode":1,"qtc":{"anglescale":1,"pr":179,"pg":0,"pb":45,"nr":255,"ng":0,"nb":0,"pth":"rgb(125,0,31)","nth":"#800000","thtype":1,"thmin":0,"thmax":1,"thpercentile":90,"height":30,"summeth":1,"barplotbg":"#c0c0c0"},"metadata":{"md1":["12003"],"md3":["21006"],"md4":["30025"]}},{"type":"bedgraph","name":"H3K9me3 of IMR90","url":"http://egg.wustl.edu/d/hg19/GSM469974.gz","mode":1,"qtc":{"anglescale":1,"pr":159,"pg":0,"pb":72,"nr":255,"ng":0,"nb":0,"pth":"rgb(111,0,50)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":50,"summeth":1},"metadata":{"md1":["11310"],"md3":["22012"],"md4":["30002"]},"geolst":["GSM469974"]},{"type":"categorical","name":"chromHMM of IMR90","url":"http://egg.wustl.edu/d/hg19/E017_15_coreMarks_dense.gz","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{"md1":["11310"],"md3":["27004"],"md4":["30002"]},"categories":{"1":["Active TSS","#ff0000"],"2":["Flanking Active TSS","#ff4500"],"3":["Transcr at gene 5' and 3'","#32cd32"],"4":["Strong transcription","#008000"],"5":["Weak transcription","#006400"],"6":["Genic enhancers","#c2e105"],"7":["Enhancers","#ffff00"],"8":["ZNF genes & repeats","#66cdaa"],"9":["Heterochromatin","#8a91d0"],"10":["Bivalent/Poised TSS","#cd5c5c"],"11":["Flanking Bivalent TSS/Enh","#e9967a"],"12":["Bivalent Enhancer","#bdb76b"],"13":["Repressed PolyComb","#808080"],"14":["Weak Repressed PolyComb","#c0c0c0"],"15":["Quiescent/Low","#ffffff"],"-1":["no information","transparent"]}},{"querygenome":"mm10","color":"#99004D","weaver":{},"type":"genomealign","name":"Mouse mm10 to hg19 blastz","url":"http://vizhub.wustl.edu/public/hg19/weaver/hg19_mm10_axt.gz","mode":3,"qtc":{"anglescale":1,"bedcolor":"#99004D","height":60,"stackheight":33},"metadata":{}},{"querygenome":"rn5","color":"#99004D","weaver":{},"type":"genomealign","name":"Rat rn5 to hg19 blastz","url":"http://vizhub.wustl.edu/public/hg19/weaver/hg19_rn5_axt.gz","mode":3,"qtc":{"anglescale":1,"bedcolor":"#99004D","height":60,"stackheight":33},"metadata":{}},{"querygenome":"rheMac3","color":"#99004D","weaver":{},"type":"genomealign","name":"Rhesus macaque rheMac3 to hg19 blastz","url":"http://vizhub.wustl.edu/public/hg19/weaver/hg19_rheMac3_axt.gz","mode":3,"qtc":{"anglescale":1,"bedcolor":"#99004D","height":60,"stackheight":33},"metadata":{}},{"type":"native_track","list":[{"name":"refGene","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#002EB8"},"metadata":{},"details":{"source":"UCSC Genome Browser","download date":"Jan 1, 2012"}},{"name":"L1","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"6pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#FF6600","bg":null},"metadata":{}}]},{"type":"bedgraph","name":"CD8 Naive Primary cells methylCRF","url":"http://remc.wustl.edu/dli/mCRF/E047.fm.bedGraph.gz","mode":"hide","qtc":{"barplotbg":"#c0c0c0","pr":179,"pg":0,"pb":45,"pth":"rgb(125,0,31)","thtype":1,"thmin":0,"thmax":1,"height":30},"metadata":{"md1":["13021"],"md3":["21006"],"md4":["30025"]}},{"type":"bedgraph","name":"CD4 Naive Primary cells methylCRF","url":"http://remc.wustl.edu/dli/mCRF/E038.fm.bedGraph.gz","mode":"hide","qtc":{"barplotbg":"#c0c0c0","pr":179,"pg":0,"pb":45,"pth":"rgb(125,0,31)","thtype":1,"thmin":0,"thmax":1,"height":30},"metadata":{"md1":["13025"],"md3":["21006"],"md4":["30025"]}},{"type":"bedgraph","name":"CD4 Memory Primary cells methylCRF","url":"http://remc.wustl.edu/dli/mCRF/E037.fm.bedGraph.gz","mode":"hide","qtc":{"barplotbg":"#c0c0c0","pr":179,"pg":0,"pb":45,"pth":"rgb(125,0,31)","thtype":1,"thmin":0,"thmax":1,"height":30},"metadata":{"md1":["13020"],"md3":["21006"],"md4":["30025"]}},{"type":"bedgraph","name":"Breast vHMEC methylCRF","url":"http://remc.wustl.edu/dli/mCRF/E028.fm.bedGraph.gz","mode":"hide","qtc":{"barplotbg":"#c0c0c0","pr":179,"pg":0,"pb":45,"pth":"rgb(125,0,31)","thtype":1,"thmin":0,"thmax":1,"height":30},"metadata":{"md1":["13007"],"md3":["21006"],"md4":["30025"]}},{"type":"bedgraph","name":"Breast Myoepithelial cells methylCRF","url":"http://remc.wustl.edu/dli/mCRF/E027.fm.bedGraph.gz","mode":"hide","qtc":{"barplotbg":"#c0c0c0","pr":179,"pg":0,"pb":45,"pth":"rgb(125,0,31)","thtype":1,"thmin":0,"thmax":1,"height":30},"metadata":{"md1":["13005"],"md3":["21006"],"md4":["30025"]}},{"type":"bedgraph","name":"H1 methylCRF","url":"http://remc.wustl.edu/dli/mCRF/E003.fm.bedGraph.gz","mode":"hide","qtc":{"barplotbg":"#c0c0c0","pr":179,"pg":0,"pb":45,"pth":"rgb(125,0,31)","thtype":1,"thmin":0,"thmax":1,"height":30},"metadata":{"md1":["11101"],"md3":["21006"],"md4":["30025"]}},{"type":"bedgraph","name":"Fetal Brain methylCRF","url":"http://remc.wustl.edu/dli/mCRF/E082.fm.bedGraph.gz","mode":"hide","qtc":{"barplotbg":"#c0c0c0","pr":179,"pg":0,"pb":45,"pth":"rgb(125,0,31)","thtype":1,"thmin":0,"thmax":1,"height":30},"metadata":{"md1":["12003"],"md3":["21006"],"md4":["30025"]}},{"type":"bedgraph","name":"Penis Foreskin Melanocyte Primary Cells methylCRF","url":"http://remc.wustl.edu/dli/mCRF/E061.fm.bedGraph.gz","mode":"hide","qtc":{"barplotbg":"#c0c0c0","pr":179,"pg":0,"pb":45,"pth":"rgb(125,0,31)","thtype":1,"thmin":0,"thmax":1,"height":30},"metadata":{"md1":["13145"],"md3":["21006"],"md4":["30025"]}},{"type":"bedgraph","name":"Penis Foreskin Melanocyte Primary Cells methylCRF","url":"http://remc.wustl.edu/dli/mCRF/E059.fm.bedGraph.gz","mode":"hide","qtc":{"barplotbg":"#c0c0c0","pr":179,"pg":0,"pb":45,"pth":"rgb(125,0,31)","thtype":1,"thmin":0,"thmax":1,"height":30},"metadata":{"md1":["13145"],"md3":["21006"],"md4":["30025"]}},{"type":"bedgraph","name":"Penis Foreskin Keratinocyte Primary Cells methylCRF","url":"http://remc.wustl.edu/dli/mCRF/E058.fm.bedGraph.gz","mode":"hide","qtc":{"barplotbg":"#c0c0c0","pr":179,"pg":0,"pb":45,"pth":"rgb(125,0,31)","thtype":1,"thmin":0,"thmax":1,"height":30},"metadata":{"md1":["13035"],"md3":["21006"],"md4":["30025"]}},{"type":"bedgraph","name":"Penis Foreskin Keratinocyte Primary Cells methylCRF","url":"http://remc.wustl.edu/dli/mCRF/E057.fm.bedGraph.gz","mode":"hide","qtc":{"barplotbg":"#c0c0c0","pr":179,"pg":0,"pb":45,"pth":"rgb(125,0,31)","thtype":1,"thmin":0,"thmax":1,"height":30},"metadata":{"md1":["13035"],"md3":["21006"],"md4":["30025"]}},{"type":"bedgraph","name":"Penis Foreskin Fibroblast Primary Cells methylCRF","url":"http://remc.wustl.edu/dli/mCRF/E056.fm.bedGraph.gz","mode":"hide","qtc":{"barplotbg":"#c0c0c0","pr":179,"pg":0,"pb":45,"pth":"rgb(125,0,31)","thtype":1,"thmin":0,"thmax":1,"height":30},"metadata":{"md1":["13144"],"md3":["21006"],"md4":["30025"]}},{"type":"bedgraph","name":"Penis Foreskin Fibroblast Primary Cells methylCRF","url":"http://remc.wustl.edu/dli/mCRF/E055.fm.bedGraph.gz","mode":"hide","qtc":{"barplotbg":"#c0c0c0","pr":179,"pg":0,"pb":45,"pth":"rgb(125,0,31)","thtype":1,"thmin":0,"thmax":1,"height":30},"metadata":{"md1":["13144"],"md3":["21006"],"md4":["30025"]}},{"type":"bedgraph","name":"Neurospheres  Ganglionic Eminence Derived methylCRF","url":"http://remc.wustl.edu/dli/mCRF/E054.fm.bedGraph.gz","mode":"hide","qtc":{"barplotbg":"#c0c0c0","pr":179,"pg":0,"pb":45,"pth":"rgb(125,0,31)","thtype":1,"thmin":0,"thmax":1,"height":30},"metadata":{"md1":["13031"],"md3":["21006"],"md4":["30025"]}},{"type":"bedgraph","name":"Neurospheres  Cortex Derived methylCRF","url":"http://remc.wustl.edu/dli/mCRF/E053.fm.bedGraph.gz","mode":"hide","qtc":{"barplotbg":"#c0c0c0","pr":179,"pg":0,"pb":45,"pth":"rgb(125,0,31)","thtype":1,"thmin":0,"thmax":1,"height":30},"metadata":{"md1":["13033"],"md3":["21006"],"md4":["30025"]}},{"type":"metadata","vocabulary_set":{"md1":"http://vizhub.wustl.edu/metadata/human/Samples","md2":"http://vizhub.wustl.edu/metadata/human/Donor","md3":"http://vizhub.wustl.edu/metadata/Experimental_assays","md4":"http://vizhub.wustl.edu/metadata/Institutions","md5":{"terms":{"11":["Real"],"12":["Imputed"],"21":["E001"],"22":["E002"],"23":["E003"],"24":["E004"],"25":["E005"],"26":["E006"],"27":["E007"],"28":["E008"],"29":["E009"],"31":["Alignment"],"32":["Signal"],"33":["macs2signal_pval"],"34":["macs2signal_foldChange"],"35":["narrowPeak"],"36":["broadPeak"],"37":["gappedPeak"],"38":["PrimaryHMM"],"39":["AuxiliaryHMM"],"210":["E010"],"211":["E011"],"212":["E012"],"213":["E013"],"214":["E014"],"215":["E015"],"216":["E016"],"217":["E017"],"218":["E018"],"219":["E019"],"220":["E020"],"221":["E021"],"222":["E022"],"223":["E023"],"224":["E024"],"225":["E025"],"226":["E026"],"227":["E027"],"228":["E028"],"229":["E029"],"230":["E030"],"231":["E031"],"232":["E032"],"233":["E033"],"234":["E034"],"235":["E035"],"236":["E036"],"237":["E037"],"238":["E038"],"239":["E039"],"240":["E040"],"241":["E041"],"242":["E042"],"243":["E043"],"244":["E044"],"245":["E045"],"246":["E046"],"247":["E047"],"248":["E048"],"249":["E049"],"250":["E050"],"251":["E051"],"252":["E052"],"253":["E053"],"254":["E054"],"255":["E055"],"256":["E056"],"257":["E057"],"258":["E058"],"259":["E059"],"260":["E061"],"261":["E062"],"262":["E063"],"263":["E065"],"264":["E066"],"265":["E067"],"266":["E068"],"267":["E069"],"268":["E070"],"269":["E071"],"270":["E072"],"271":["E073"],"272":["E074"],"273":["E075"],"274":["E076"],"275":["E077"],"276":["E078"],"277":["E079"],"278":["E080"],"279":["E081"],"280":["E082"],"281":["E083"],"282":["E084"],"283":["E085"],"284":["E086"],"285":["E087"],"286":["E088"],"287":["E089"],"288":["E090"],"289":["E091"],"290":["E092"],"291":["E093"],"292":["E094"],"293":["E095"],"294":["E096"],"295":["E097"],"296":["E098"],"297":["E099"],"298":["E100"],"299":["E101"],"310":["ImputedHMM"],"2100":["E102"],"2101":["E103"],"2102":["E104"],"2103":["E105"],"2104":["E106"],"2105":["E107"],"2106":["E108"],"2107":["E109"],"2108":["E110"],"2109":["E111"],"2110":["E112"],"2111":["E113"],"2112":["E114"],"2113":["E115"],"2114":["E116"],"2115":["E117"],"2116":["E118"],"2117":["E119"],"2118":["E120"],"2119":["E121"],"2120":["E122"],"2121":["E123"],"2122":["E124"],"2123":["E125"],"2124":["E126"],"2125":["E127"],"2126":["E128"],"2127":["E129"]},"vocabulary":{"Type":["11","12"],"EID":["21","22","23","24","25","26","27","28","29","210","211","212","213","214","215","216","217","218","219","220","221","222","223","224","225","226","227","228","229","230","231","232","233","234","235","236","237","238","239","240","241","242","243","244","245","246","247","248","249","250","251","252","253","254","255","256","257","258","259","260","261","262","263","264","265","266","267","268","269","270","271","272","273","274","275","276","277","278","279","280","281","282","283","284","285","286","287","288","289","290","291","292","293","294","295","296","297","298","299","2100","2101","2102","2103","2104","2105","2106","2107","2108","2109","2110","2111","2112","2113","2114","2115","2116","2117","2118","2119","2120","2121","2122","2123","2124","2125","2126","2127"],"View":["31","32","33","34","35","36","37","38","39","310"]},"source":"http://vizhub.wustl.edu/public/hg19/roadmap_consolidated_02182015.json.md.pvalsig"},"md6":{"terms":{"11":["Real"],"12":["Imputed"],"21":["E001"],"22":["E002"],"23":["E003"],"24":["E004"],"25":["E005"],"26":["E006"],"27":["E007"],"28":["E008"],"29":["E009"],"31":["Alignment"],"32":["Signal"],"33":["macs2signal_pval"],"34":["macs2signal_foldChange"],"35":["narrowPeak"],"36":["broadPeak"],"37":["gappedPeak"],"38":["PrimaryHMM"],"39":["AuxiliaryHMM"],"210":["E010"],"211":["E011"],"212":["E012"],"213":["E013"],"214":["E014"],"215":["E015"],"216":["E016"],"217":["E017"],"218":["E018"],"219":["E019"],"220":["E020"],"221":["E021"],"222":["E022"],"223":["E023"],"224":["E024"],"225":["E025"],"226":["E026"],"227":["E027"],"228":["E028"],"229":["E029"],"230":["E030"],"231":["E031"],"232":["E032"],"233":["E033"],"234":["E034"],"235":["E035"],"236":["E036"],"237":["E037"],"238":["E038"],"239":["E039"],"240":["E040"],"241":["E041"],"242":["E042"],"243":["E043"],"244":["E044"],"245":["E045"],"246":["E046"],"247":["E047"],"248":["E048"],"249":["E049"],"250":["E050"],"251":["E051"],"252":["E052"],"253":["E053"],"254":["E054"],"255":["E055"],"256":["E056"],"257":["E057"],"258":["E058"],"259":["E059"],"260":["E061"],"261":["E062"],"262":["E063"],"263":["E065"],"264":["E066"],"265":["E067"],"266":["E068"],"267":["E069"],"268":["E070"],"269":["E071"],"270":["E072"],"271":["E073"],"272":["E074"],"273":["E075"],"274":["E076"],"275":["E077"],"276":["E078"],"277":["E079"],"278":["E080"],"279":["E081"],"280":["E082"],"281":["E083"],"282":["E084"],"283":["E085"],"284":["E086"],"285":["E087"],"286":["E088"],"287":["E089"],"288":["E090"],"289":["E091"],"290":["E092"],"291":["E093"],"292":["E094"],"293":["E095"],"294":["E096"],"295":["E097"],"296":["E098"],"297":["E099"],"298":["E100"],"299":["E101"],"310":["ImputedHMM"],"2100":["E102"],"2101":["E103"],"2102":["E104"],"2103":["E105"],"2104":["E106"],"2105":["E107"],"2106":["E108"],"2107":["E109"],"2108":["E110"],"2109":["E111"],"2110":["E112"],"2111":["E113"],"2112":["E114"],"2113":["E115"],"2114":["E116"],"2115":["E117"],"2116":["E118"],"2117":["E119"],"2118":["E120"],"2119":["E121"],"2120":["E122"],"2121":["E123"],"2122":["E124"],"2123":["E125"],"2124":["E126"],"2125":["E127"],"2126":["E128"],"2127":["E129"]},"vocabulary":{"Type":["11","12"],"EID":["21","22","23","24","25","26","27","28","29","210","211","212","213","214","215","216","217","218","219","220","221","222","223","224","225","226","227","228","229","230","231","232","233","234","235","236","237","238","239","240","241","242","243","244","245","246","247","248","249","250","251","252","253","254","255","256","257","258","259","260","261","262","263","264","265","266","267","268","269","270","271","272","273","274","275","276","277","278","279","280","281","282","283","284","285","286","287","288","289","290","291","292","293","294","295","296","297","298","299","2100","2101","2102","2103","2104","2105","2106","2107","2108","2109","2110","2111","2112","2113","2114","2115","2116","2117","2118","2119","2120","2121","2122","2123","2124","2125","2126","2127"],"View":["31","32","33","34","35","36","37","38","39","310"]},"source":"http://vizhub.wustl.edu/public/hg19/roadmap_consolidated_02182015.json.md.hmm"},"md7":{"terms":{"11":["Real"],"12":["Imputed"],"21":["E001"],"22":["E002"],"23":["E003"],"24":["E004"],"25":["E005"],"26":["E006"],"27":["E007"],"28":["E008"],"29":["E009"],"31":["Alignment"],"32":["Signal"],"33":["macs2signal_pval"],"34":["macs2signal_foldChange"],"35":["narrowPeak"],"36":["broadPeak"],"37":["gappedPeak"],"38":["PrimaryHMM"],"39":["AuxiliaryHMM"],"210":["E010"],"211":["E011"],"212":["E012"],"213":["E013"],"214":["E014"],"215":["E015"],"216":["E016"],"217":["E017"],"218":["E018"],"219":["E019"],"220":["E020"],"221":["E021"],"222":["E022"],"223":["E023"],"224":["E024"],"225":["E025"],"226":["E026"],"227":["E027"],"228":["E028"],"229":["E029"],"230":["E030"],"231":["E031"],"232":["E032"],"233":["E033"],"234":["E034"],"235":["E035"],"236":["E036"],"237":["E037"],"238":["E038"],"239":["E039"],"240":["E040"],"241":["E041"],"242":["E042"],"243":["E043"],"244":["E044"],"245":["E045"],"246":["E046"],"247":["E047"],"248":["E048"],"249":["E049"],"250":["E050"],"251":["E051"],"252":["E052"],"253":["E053"],"254":["E054"],"255":["E055"],"256":["E056"],"257":["E057"],"258":["E058"],"259":["E059"],"260":["E061"],"261":["E062"],"262":["E063"],"263":["E065"],"264":["E066"],"265":["E067"],"266":["E068"],"267":["E069"],"268":["E070"],"269":["E071"],"270":["E072"],"271":["E073"],"272":["E074"],"273":["E075"],"274":["E076"],"275":["E077"],"276":["E078"],"277":["E079"],"278":["E080"],"279":["E081"],"280":["E082"],"281":["E083"],"282":["E084"],"283":["E085"],"284":["E086"],"285":["E087"],"286":["E088"],"287":["E089"],"288":["E090"],"289":["E091"],"290":["E092"],"291":["E093"],"292":["E094"],"293":["E095"],"294":["E096"],"295":["E097"],"296":["E098"],"297":["E099"],"298":["E100"],"299":["E101"],"310":["ImputedHMM"],"2100":["E102"],"2101":["E103"],"2102":["E104"],"2103":["E105"],"2104":["E106"],"2105":["E107"],"2106":["E108"],"2107":["E109"],"2108":["E110"],"2109":["E111"],"2110":["E112"],"2111":["E113"],"2112":["E114"],"2113":["E115"],"2114":["E116"],"2115":["E117"],"2116":["E118"],"2117":["E119"],"2118":["E120"],"2119":["E121"],"2120":["E122"],"2121":["E123"],"2122":["E124"],"2123":["E125"],"2124":["E126"],"2125":["E127"],"2126":["E128"],"2127":["E129"]},"vocabulary":{"Type":["11","12"],"EID":["21","22","23","24","25","26","27","28","29","210","211","212","213","214","215","216","217","218","219","220","221","222","223","224","225","226","227","228","229","230","231","232","233","234","235","236","237","238","239","240","241","242","243","244","245","246","247","248","249","250","251","252","253","254","255","256","257","258","259","260","261","262","263","264","265","266","267","268","269","270","271","272","273","274","275","276","277","278","279","280","281","282","283","284","285","286","287","288","289","290","291","292","293","294","295","296","297","298","299","2100","2101","2102","2103","2104","2105","2106","2107","2108","2109","2110","2111","2112","2113","2114","2115","2116","2117","2118","2119","2120","2121","2122","2123","2124","2125","2126","2127"],"View":["31","32","33","34","35","36","37","38","39","310"]},"source":"http://vizhub.wustl.edu/public/hg19/roadmap_consolidated_02182015.json.md"},"md8":{"terms":{"11":["Alignment"],"12":["macs2signal_pval"],"13":["macs2signal_foldChange"],"14":["narrowPeak"],"15":["broadPeak"],"16":["gappedPeak"]},"vocabulary":{"View":["11","12","13","14","15","16"]},"source":"http://vizhub.wustl.edu/public/hg19/roadmap_unconsolidated_02182015.json.md"}},"show_terms":{"md1":["Sample"],"md3":["Assay"],"md5":["View","Type"],"md6":["View","Type"],"md7":["View","Type"]}},{"type":"coordinate_override","coord":"chr6,154300523,chr6,154300716"}]