[{"type":"bigwig","name":"Bernstein GM12878 H3K4me2","url":"http://egg.wustl.edu/d/hg19/GSM733769_1.bigWig","mode":1,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":255,"nr":255,"ng":0,"nb":0,"pth":"rgb(0,57,28)","nth":"#800000","thtype":1,"thmin":1,"thmax":15,"thpercentile":90,"height":15,"summeth":1},"metadata":{"md1":["13047"],"md3":["22008"],"md4":["30003"]},"geolst":["GSM733769"]},{"type":"interaction","name":"H3K4me2 ChIA-PET in CD4+ T cells-R1andR2merged","url":"http://epgg-test.wustl.edu/dli/long-range-mc/hg19/interaction_GSE32677_hg18_H3K4me2_interact_Exp1_plus_Exp2.bed.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":500,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":10},"metadata":{"md1":["13288"],"md3":["27001"],"md4":["30040"]},"details":{"Publication":"Chepelev I, Wei G, Wangsa D, Tang Q et al. Characterization of genome-wide enhancer-promoter interactions reveals co-expression of interacting genes and modes of higher order chromatin organization. Cell Res 2012 Mar;22(3):490-503.","PMID":"22270183"},"geolst":["GSE32677"]},{"type":"interaction","name":"RAD21 ChIA-PET in GM12878-R1","url":"http://epgg-test.wustl.edu/dli/long-range-mc/hg19/interaction_GSM1436265_ENCFF002EMO.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":4.88878704133449,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":10},"metadata":{"md1":["13047"],"md3":["27001"],"md4":["30018"]},"details":{"Publication":"Heidari N, Phanstiel DH, He C, Grubert F et al. Genome-wide map of regulatory interactions in the human genome. Genome Res 2014 Dec;24(12):1905-17.","PMID":"25228660"},"geolst":["GSE59395","GSM1436265"]},{"type":"interaction","name":"ChIA-PET GM12878 CTCF","url":"http://epgg-test.wustl.edu/dli/long-range-mc/hg19/interaction_GSM1872886_GM12878_CTCF_PET_clusters.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":1,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":1,"ncolorscore":0,"pfilterscore":1,"nfilterscore":0,"height":10},"metadata":{"md1":["13047"],"md3":["27001"],"md4":["30041"]},"details":{"Publication":"Tang Z, Luo OJ, Li X, Zheng M et al. CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription. Cell 2015 Dec 17;163(7):1611-27.","PMID":"26686651"},"geolst":["GSE72816","GSM1872886"]},{"type":"interaction","name":"ChIA-PET GM12878 RNAPolII","url":"http://epgg-test.wustl.edu/dli/long-range-mc/hg19/interaction_GSM1872887_GM12878_RNAPII_PET_clusters.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":1,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":1,"ncolorscore":0,"pfilterscore":1,"nfilterscore":0,"height":10},"metadata":{"md1":["13047"],"md3":["27001"],"md4":["30041"]},"details":{"Publication":"Tang Z, Luo OJ, Li X, Zheng M et al. CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription. Cell 2015 Dec 17;163(7):1611-27.","PMID":"26686651"},"geolst":["GSE72816","GSM1872887"]},{"type":"native_track","list":[{"name":"rmsk_ensemble","mode":1,"qtc":{"anglescale":1,"height":15},"metadata":{},"categories":{"1":["SINE - short interspersed nuclear elements","#cc0000"],"2":["LINE - long interspersed nuclear element","#FF6600"],"3":["LTR - long terminal repeat element","#006600"],"4":["DNA transposon","#4A72E8"],"5":["Simple repeat, micro-satellite","#AB833B"],"6":["Satellite repeat","#660000"],"7":["Low complexity repeat","#663333"],"8":["RNA repeat","#cc33ff"],"9":["Other repeats","#488E8E"],"10":["Unknown","#5C5C5C"],"-1":["no information","transparent"]}}]},{"type":"metadata","vocabulary_set":{"md1":"http://vizhub.wustl.edu/metadata/human/Samples","md2":"http://vizhub.wustl.edu/metadata/human/Donor","md3":"http://vizhub.wustl.edu/metadata/Experimental_assays","md4":"http://vizhub.wustl.edu/metadata/Institutions"},"show_terms":{"md1":["Sample"],"md3":["Assay"]}},{"type":"coordinate_override","coord":"chr11,135006516,chr12,133426067"}]