[{"type":"native_track","list":[{"name":"refGene","mode":3,"qtc":{"anglescale":1,"pr":0,"pg":77,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#002EB8"},"metadata":{},"details":{"source":"UCSC Genome Browser","download date":"Jan 1, 2012"}}]},{"type":"metadata","vocabulary_set":{}},{"type":"coordinate_override","coord":"chr2,127805597,chr2,127864902"},{"type":"geneset_ripe","list":[{"name":"AD Genes","lst":[{"c":"chr11","a":47376408,"b":47400127,"isgene":true,"type":"refGene","name":"SPI1","id":44298,"strand":"-","struct":{"thin":[[47376408,47376777],[47399904,47400127]],"thick":[[47376777,47377097],[47380394,47380557],[47381403,47381591],[47397183,47397283],[47399859,47399904]]},"desc":"Homo sapiens spleen focus forming virus (SFFV) proviral integration oncogene spi1 (SPI1), transcript variant 1, mRNA.","a1":47376408,"b1":47400127},{"c":"chr11","a":47586981,"b":47595013,"isgene":true,"type":"refGene","name":"PTPMT1","id":4809,"strand":"+","struct":{"thin":[[47586981,47587174],[47593114,47595013]],"thick":[[47587174,47587538],[47593022,47593114]]},"desc":"Homo sapiens protein tyrosine phosphatase, mitochondrial 1 (PTPMT1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.","a1":47586981,"b1":47595013},{"c":"chr11","a":47586887,"b":47606113,"isgene":true,"type":"gencodeV17","name":"NDUFS3","id":27769,"strand":"+","struct":{"thin":[[47586887,47587348],[47587457,47587538],[47593022,47593295],[47602076,47602536],[47603639,47603765],[47603900,47604020],[47605865,47606113]]},"category":2,"desc":"Homo sapiens NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase) (NDUFS3), nuclear gene encoding mitochondrial protein, mRNA.","details":{"Gene ID":"<a href=http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;t=ENSG00000213619.5 class=w target=_blank>ENSG00000213619.5</a>","Transcript ID":"<a href=http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;t=ENST00000533507.1 class=w target=_blank>ENST00000533507.1</a>","PubMed":"<a href=http://www.ncbi.nlm.nih.gov/pubmed/9763677 class=w target=_blank>9763677</a>","Gene bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>","Transcript bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>processed_transcript</a>"},"a1":47586887,"b1":47606113},{"c":"chr11","a":47352956,"b":47374253,"isgene":true,"type":"refGene","name":"MYBPC3","id":33694,"strand":"-","struct":{"thin":[[47352956,47353267],[47353395,47353421],[47374198,47374253]],"thick":[[47353421,47353432],[47353622,47353809],[47354116,47354253],[47354364,47354524],[47354744,47354884],[47355107,47355303],[47355472,47355561],[47356592,47356760],[47357427,47357562],[47358941,47359130],[47359240,47359345],[47360070,47360230],[47360874,47360955],[47361201,47361341],[47362553,47362583],[47362688,47362795],[47363541,47363707],[47364128,47364295],[47364380,47364486],[47364571,47364699],[47365042,47365175],[47367757,47367921],[47368177,47368195],[47368972,47368974],[47368975,47369030],[47369201,47369231],[47369407,47369456],[47369974,47370092],[47371324,47371473],[47371564,47371663],[47372052,47372166],[47372789,47373056],[47374173,47374198]]},"desc":"Homo sapiens myosin binding protein C, cardiac (MYBPC3), mRNA.","a1":47352956,"b1":47374253},{"c":"chr11","a":47290926,"b":47351582,"isgene":true,"type":"refGene","name":"MADD","id":14340,"strand":"+","struct":{"thin":[[47290926,47291195],[47295377,47295465],[47350701,47351582]],"thick":[[47295465,47295527],[47296113,47296710],[47297449,47297753],[47298282,47298414],[47299715,47299829],[47300549,47300630],[47303125,47303304],[47303931,47304167],[47304363,47304520],[47305728,47305832],[47305925,47306116],[47306491,47306745],[47307001,47307141],[47307983,47308085],[47310941,47311044],[47311417,47311604],[47311699,47311850],[47312160,47312367],[47315433,47315534],[47317046,47317130],[47317447,47317606],[47330141,47330250],[47330831,47330952],[47331057,47331163],[47333282,47333393],[47336770,47336878],[47345221,47345386],[47345815,47345888],[47346021,47346128],[47348288,47348358],[47350208,47350255],[47350596,47350701]]},"desc":"Homo sapiens MAP-kinase activating death domain (MADD), transcript variant 1, mRNA.","a1":47290926,"b1":47351582},{"c":"chr2","a":233925035,"b":234116549,"isgene":true,"type":"refGene","name":"INPP5D","id":5540,"strand":"+","struct":{"thin":[[233925035,233925188],[234115354,234116549]],"thick":[[233925188,233925322],[233944044,233944108],[233986816,233986967],[233990454,233990629],[233995217,233995358],[234054804,234054888],[234055012,234055084],[234056116,234056240],[234066958,234067065],[234070369,234070472],[234072352,234072549],[234072952,234073070],[234077950,234078047],[234078671,234078810],[234079141,234079250],[234079709,234079798],[234085910,234085992],[234091055,234091145],[234093053,234093167],[234094488,234094571],[234098495,234098583],[234102457,234102607],[234104044,234104141],[234106740,234107022],[234112771,234113363],[234115351,234115354]]},"desc":"Homo sapiens inositol polyphosphate-5-phosphatase, 145kDa (INPP5D), transcript variant 1, mRNA.","a1":233925035,"b1":234116549},{"c":"chr14","a":75179846,"b":75203394,"isgene":true,"type":"gencodeV17","name":"FCF1","id":54886,"strand":"+","struct":{"thin":[[75179846,75179900],[75201633,75203394]],"thick":[[75179900,75179903],[75180187,75180255],[75181574,75181646],[75182653,75182802],[75189974,75190047],[75199433,75199521],[75200778,75200873],[75201584,75201633]]},"category":1,"desc":"Homo sapiens FCF1 rRNA-processing protein (FCF1), mRNA.","details":{"Gene ID":"<a href=http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;t=ENSG00000119616.7 class=w target=_blank>ENSG00000119616.7</a>","Transcript ID":"<a href=http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;t=ENST00000341162.4 class=w target=_blank>ENST00000341162.4</a>","UniProt":"<a href=http://www.uniprot.org/uniprot/G3V1S4 class=w target=_blank>G3V1S4</a><br><a href=http://www.uniprot.org/uniprot/G3V2M5 class=w target=_blank>G3V2M5</a><br><a href=http://www.uniprot.org/uniprot/Q4FZ45 class=w target=_blank>Q4FZ45</a><br><a href=http://www.uniprot.org/uniprot/Q66K47 class=w target=_blank>Q66K47</a><br><a href=http://www.uniprot.org/uniprot/Q9Y324 class=w target=_blank>Q9Y324</a>","PubMed":"<a href=http://www.ncbi.nlm.nih.gov/pubmed/16762320 class=w target=_blank>16762320</a>","RefSeq":"<a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=Nucleotide&doptcmdl=GenBank&term=NM_015962.4 class=w target=_blank>NM_015962.4</a>, <a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=Nucleotide&doptcmdl=GenBank&term=NP_057046.1 class=w target=_blank>NP_057046.1</a>","Gene bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>","Transcript bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>"},"a1":75179846,"b1":75203394},{"c":"chr11","a":47487488,"b":47574792,"isgene":true,"type":"refGene","name":"CELF1","id":5351,"strand":"-","struct":{"thin":[[47487488,47490443],[47493742,47493781],[47510566,47510576],[47574543,47574792]],"thick":[[47493781,47493909],[47494639,47494783],[47496887,47497073],[47498397,47498508],[47498848,47498977],[47500428,47500492],[47504246,47504408],[47505004,47505084],[47505940,47506075],[47508301,47508350],[47508710,47508793],[47510388,47510566]]},"desc":"Homo sapiens CUGBP, Elav-like family member 1 (CELF1), transcript variant 1, mRNA.","a1":47487488,"b1":47574792},{"c":"chr2","a":127805602,"b":127864931,"isgene":true,"type":"gencodeV17","name":"BIN1","id":110737,"strand":"-","struct":{"thin":[[127805602,127806101],[127864519,127864931]],"thick":[[127806101,127806209],[127807996,127808098],[127808377,127808488],[127808729,127808819],[127809830,127809938],[127810997,127811021],[127811480,127811588],[127815048,127815177],[127816586,127816731],[127819690,127819773],[127821146,127821222],[127821508,127821594],[127825738,127825831],[127826499,127826607],[127827570,127827666],[127828128,127828223],[127828337,127828392],[127834201,127834282],[127864435,127864519]]},"category":1,"desc":"Homo sapiens bridging integrator 1 (BIN1), transcript variant 1, mRNA.","details":{"Gene ID":"<a href=http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;t=ENSG00000136717.10 class=w target=_blank>ENSG00000136717.10</a>","Transcript ID":"<a href=http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;t=ENST00000316724.5 class=w target=_blank>ENST00000316724.5</a>","Remark":"NP_647593.1","UniProt":"<a href=http://www.uniprot.org/uniprot/O00499 class=w target=_blank>O00499</a>","PubMed":"<a href=http://www.ncbi.nlm.nih.gov/pubmed/8725406 class=w target=_blank>8725406</a><br><a href=http://www.ncbi.nlm.nih.gov/pubmed/17676042 class=w target=_blank>17676042</a><br><a href=http://www.ncbi.nlm.nih.gov/pubmed/8782822 class=w target=_blank>8782822</a>","RefSeq":"<a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=Nucleotide&doptcmdl=GenBank&term=NM_139343.2 class=w target=_blank>NM_139343.2</a>, <a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=Nucleotide&doptcmdl=GenBank&term=NP_647593.1 class=w target=_blank>NP_647593.1</a>","Gene bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>","Transcript bioType":"<a href=http://www.gencodegenes.org/gencode_biotypes.html class=w target=_blank>protein_coding</a>"},"a1":127805602,"b1":127864931}],"gss_down":2500,"gss_opt":"genebody","gss_origin":"txstart","gss_up":2500}]}]