[{"type":"bed","name":"Top20Combined.txt","url":"http://epigenomegateway.wustl.edu/browser/t/1441184863.txt.gz","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"metadata":{}},{"type":"bed","name":"PGC_108.txt","url":"http://epigenomegateway.wustl.edu/browser/t/536456061.txt.gz","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"metadata":{}},{"type":"bed","name":"Pooled Neuron TAD","url":"ftp://ftp.nygenome.org/data2/wliao/AkbarianS/40kb/Sample_Neu.553x2_2607_40000.DI.HMM_calls.gb.bed.gz","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"metadata":{}},{"type":"interaction","name":"Pooled Neuron","url":"ftp://ftp.nygenome.org/data2/wliao/AkbarianS/40kb/Sample_Neu.553x2_2607_40000_iced.bed.gz","mode":5,"qtc":{"anglescale":0.6000000000000001,"textcolor":"#000000","thtype":1,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":106,"pg":90,"pb":205,"nr":0,"ng":99,"nb":133,"pcolorscore":400,"ncolorscore":0,"pfilterscore":4,"nfilterscore":-2,"height":50},"metadata":{}},{"type":"bed","name":"Pooled Astro TAD","url":"ftp://ftp.nygenome.org/data2/wliao/AkbarianS/40kb/Sample_Astro.553x2_2607_40000.DI.HMM_calls.gb.bed.gz","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"metadata":{}},{"type":"bed","name":"Pooled NPC TAD","url":"ftp://ftp.nygenome.org/data2/wliao/AkbarianS/40kb/Sample_NPC.553x2_40000.DI.HMM_calls.gb.bed.gz","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"metadata":{}},{"type":"native_track","list":[{"name":"refGene","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#002EB8"},"metadata":{},"details":{"source":"UCSC Genome Browser","download date":"Jan 1, 2012"}}]},{"type":"interaction","name":"Pooled NPC","url":"ftp://ftp.nygenome.org/data2/wliao/AkbarianS/40kb/Sample_NPC.553x2_2607_40000_iced.bed.gz","mode":"hide","qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":106,"pg":90,"pb":205,"nr":0,"ng":99,"nb":133,"pcolorscore":600,"ncolorscore":0,"pfilterscore":4,"nfilterscore":-2,"height":50},"metadata":{}},{"type":"interaction","name":"NeuN Pos 100kb","url":"ftp://ftp.nygenome.org/data2/wliao/AkbarianS/100kb/Sample_354Neu_100000.bed.gz","mode":"hide","qtc":{"pfilterscore":5,"nfilterscore":-2,"pr":0,"pg":0,"pb":0,"thtype":1,"pcolorscore":200},"metadata":{}},{"type":"interaction","name":"NeuN Neg 100kb","url":"ftp://ftp.nygenome.org/data2/wliao/AkbarianS/100kb/Sample_354Glia_100000_iced.bed.gz","mode":"hide","qtc":{"pfilterscore":5,"nfilterscore":-2,"pr":106,"pg":90,"pb":205,"thtype":1,"pcolorscore":200},"metadata":{}},{"type":"interaction","name":"2607 NPC","url":"ftp://ftp.nygenome.org/data2/wliao/AkbarianS/40kb/Sample_2607NPC_40000_iced.bed.gz","mode":"hide","qtc":{"pfilterscore":2,"nfilterscore":-2},"metadata":{}},{"type":"interaction","name":"553 NPC","url":"ftp://ftp.nygenome.org/data2/wliao/AkbarianS/40kb/Sample_553NPC_40000_iced.bed.gz","mode":"hide","qtc":{"pfilterscore":5,"nfilterscore":-2,"pr":106,"pg":90,"pb":205,"height":50},"metadata":{}},{"type":"interaction","name":"PM NeuN Neg 40kb","url":"ftp://ftp.nygenome.org/data2/wliao/AkbarianS/40kb/Sample_354Glia_40000_iced.bed.gz","mode":"hide","qtc":{"pfilterscore":5,"nfilterscore":-2,"pr":0,"pg":0,"pb":0},"metadata":{}},{"type":"interaction","name":"PM NeuN Pos 40kb","url":"ftp://ftp.nygenome.org/data2/wliao/AkbarianS/40kb/Sample_354Neu_40000_iced.bed.gz","mode":"hide","qtc":{"pfilterscore":5,"nfilterscore":-2,"pr":0,"pg":0,"pb":0},"metadata":{}},{"type":"interaction","name":"553 Astro","url":"ftp://ftp.nygenome.org/data2/wliao/AkbarianS/40kb/Sample_553Astro_40000_iced.bed.gz","mode":"hide","qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":0,"pg":0,"pb":0,"nr":0,"ng":99,"nb":133,"pcolorscore":254.325008,"ncolorscore":0,"pfilterscore":5,"nfilterscore":-2,"height":50},"metadata":{}},{"type":"interaction","name":"2607 Astro","url":"ftp://ftp.nygenome.org/data2/wliao/AkbarianS/40kb/Sample_2607Astro_40000_iced.bed.gz","mode":"hide","qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":0,"pg":0,"pb":0,"nr":0,"ng":99,"nb":133,"pcolorscore":228.25706,"ncolorscore":0,"pfilterscore":5,"nfilterscore":-2,"height":50},"metadata":{}},{"type":"interaction","name":"Pooled Astro","url":"ftp://ftp.nygenome.org/data2/wliao/AkbarianS/40kb/Sample_Astro.553x2_2607_40000_iced.bed.gz","mode":"hide","qtc":{"anglescale":0.6000000000000001,"textcolor":"#000000","thtype":1,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":106,"pg":90,"pb":205,"nr":0,"ng":99,"nb":133,"pcolorscore":600,"ncolorscore":0,"pfilterscore":4,"nfilterscore":-2,"height":50},"metadata":{}},{"type":"interaction","name":"553 Neuron","url":"ftp://ftp.nygenome.org/data2/wliao/AkbarianS/40kb/Sample_553Neu_40000_iced.bed.gz","mode":"hide","qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":0,"pg":0,"pb":0,"nr":0,"ng":99,"nb":133,"pcolorscore":311.361939,"ncolorscore":0,"pfilterscore":5,"nfilterscore":-2,"height":50},"metadata":{}},{"type":"interaction","name":"2607 Neuron","url":"ftp://ftp.nygenome.org/data2/wliao/AkbarianS/40kb/Sample_2607Neu_40000_iced.bed.gz","mode":"hide","qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":0,"pg":0,"pb":0,"nr":0,"ng":99,"nb":133,"pcolorscore":158.023277,"ncolorscore":0,"pfilterscore":5,"nfilterscore":-2,"height":50},"metadata":{}},{"type":"metadata","vocabulary_set":{"md1":"http://vizhub.wustl.edu/metadata/human/Samples","md2":"http://vizhub.wustl.edu/metadata/human/Donor","md3":"http://vizhub.wustl.edu/metadata/Experimental_assays","md4":"http://vizhub.wustl.edu/metadata/Institutions"},"show_terms":{"md1":["Sample"],"md3":["Assay"]}},{"type":"coordinate_override","coord":"chr5,140041010,chr5,140172015"}]