[{"type":"bed","name":"iPSC TADs","url":"https://wangftp.wustl.edu/~dli/Lindsey_Montefiori/TADs-iPSC.bed.gz","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"rgb(43, 153, 156)"},"metadata":{}},{"type":"bigwig","name":"iPSC RNA-seq","url":"https://wangftp.wustl.edu/~dli/Lindsey_Montefiori/RNAseq-iPSC.bw","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1},"metadata":{}},{"type":"bigwig","name":"H3K27ac of H1","url":"https://egg.wustl.edu/d/hg19/GSM466732.bigWig","mode":1,"qtc":{"anglescale":1,"pr":24,"pg":150,"pb":18,"nr":255,"ng":0,"nb":0,"pth":"rgb(0,0,105)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1},"metadata":{"md1":["11101"],"md3":["22019"],"md4":["30002"]},"geolst":["GSM466732"]},{"type":"bigwig","name":"H3K4me1 of H1","url":"https://egg.wustl.edu/d/hg19/GSM537679.bigWig","mode":1,"qtc":{"anglescale":1,"pr":155,"pg":80,"pb":235,"nr":255,"ng":0,"nb":0,"pth":"rgb(0,93,46)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1},"metadata":{"md1":["11101"],"md3":["22010"],"md4":["30003"]},"geolst":["GSM537679"]},{"type":"bigwig","name":"H3K27me3 of H1","url":"https://egg.wustl.edu/d/hg19/GSM537683.bigWig","mode":1,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"rgb(125,0,0)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1},"metadata":{"md1":["11101"],"md3":["22018"],"md4":["30003"]},"geolst":["GSM537683"]},{"type":"bed","name":"H1 CTCF","url":"https://wangftp.wustl.edu/~dli/Lindsey_Montefiori/CTCF-H1.bed.gz","mode":6,"qtc":{"anglescale":1,"pr":222,"pg":174,"pb":69,"nr":0,"ng":0,"nb":230,"pth":"rgb(222, 174, 69)","nth":"#000099","thtype":2,"thmin":0,"thmax":10,"thpercentile":0,"height":20,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"metadata":{}},{"type":"interaction","name":"iPSC PCHi-C interactions","url":"https://wangftp.wustl.edu/~dli/Lindsey_Montefiori/PCHiC-iPSC.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":43,"pg":153,"pb":156,"nr":0,"ng":99,"nb":133,"pcolorscore":0,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50},"metadata":{}},{"type":"bed","name":"CM TADs","url":"https://wangftp.wustl.edu/~dli/Lindsey_Montefiori/TADs-CM.bed.gz","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"rgb(230, 39, 51)"},"metadata":{}},{"type":"bed","name":"CVD tag SNPs","url":"https://wangftp.wustl.edu/~dli/Lindsey_Montefiori/tagsnps.bed.gz","mode":6,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"rgb(0, 0, 0)","nth":"#000099","thtype":2,"thmin":0,"thmax":10,"thpercentile":0,"height":20,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"metadata":{}},{"type":"bed","name":"Arrhythmia LD SNPs","url":"https://wangftp.wustl.edu/~dli/Lindsey_Montefiori/LD-SNPs-arrhythmia.bed.gz","mode":6,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"rgb(0, 0, 0)","nth":"#000099","thtype":2,"thmin":0,"thmax":10,"thpercentile":0,"height":20,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"metadata":{}},{"type":"bed","name":"Heart failure LD SNPs","url":"https://wangftp.wustl.edu/~dli/Lindsey_Montefiori/LD-SNPs-heartfailure.bed.gz","mode":6,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"rgb(0, 0, 0)","nth":"#000099","thtype":2,"thmin":0,"thmax":10,"thpercentile":0,"height":20,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"metadata":{}},{"type":"bed","name":"Myocardial infarction LD SNPs","url":"https://wangftp.wustl.edu/~dli/Lindsey_Montefiori/LD-SNPs-infarction.bed.gz","mode":6,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"rgb(0, 0, 0)","nth":"#000099","thtype":2,"thmin":0,"thmax":10,"thpercentile":0,"height":20,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"metadata":{}},{"type":"bigwig","name":"CM RNA-seq","url":"https://wangftp.wustl.edu/~dli/Lindsey_Montefiori/RNAseq-CM.bw","mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#000099","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1},"metadata":{}},{"type":"bigwig","name":"H3K27ac of Left Ventricle","url":"https://egg.wustl.edu/d/hg19/GSM908951_1.bigWig","mode":1,"qtc":{"anglescale":1,"pr":24,"pg":150,"pb":18,"nr":255,"ng":0,"nb":0,"pth":"rgb(0,0,105)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1},"metadata":{"md1":["13210"],"md2":["40272","60001","70001"],"md3":["22019"],"md4":["30002"]},"geolst":["GSM908951"]},{"type":"bigwig","name":"H3K4me1 of Left Ventricle","url":"https://egg.wustl.edu/d/hg19/GSM910575_1.bigWig","mode":1,"qtc":{"anglescale":1,"pr":155,"pg":80,"pb":235,"nr":255,"ng":0,"nb":0,"pth":"rgb(155, 80, 235)","nth":"#800000","thtype":0,"thmin":0,"thmax":24,"thpercentile":90,"height":20,"summeth":1},"metadata":{"md1":["13210"],"md2":["40216","60001","70004"],"md3":["22010"],"md4":["30002"]},"geolst":["GSM910575"]},{"type":"bigwig","name":"H3K27me3 of Left Ventricle","url":"https://egg.wustl.edu/d/hg19/GSM908952_1.bigWig","mode":1,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"rgb(125,0,0)","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":20,"summeth":1},"metadata":{"md1":["13210"],"md2":["40272","60001","70001"],"md3":["22018"],"md4":["30002"]},"geolst":["GSM908952"]},{"type":"bed","name":"CTCF Human Cardiomyocyte","url":"https://wangftp.wustl.edu/~dli/Lindsey_Montefiori/CTCF-heart.bed.gz","mode":6,"qtc":{"anglescale":1,"pr":222,"pg":174,"pb":69,"nr":0,"ng":0,"nb":230,"pth":"rgb(222, 174, 69)","nth":"#000099","thtype":2,"thmin":0,"thmax":10,"thpercentile":0,"height":20,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"metadata":{}},{"type":"interaction","name":"CM PCHi-C interactions","url":"https://wangftp.wustl.edu/~dli/Lindsey_Montefiori/PCHiC-CM.txt.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":230,"pg":39,"pb":51,"nr":0,"ng":99,"nb":133,"pcolorscore":0,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50},"metadata":{}},{"type":"hic","name":"HMEC_1in_situ_1combined","url":"https://hicfiles.s3.amazonaws.com/hiseq/hmec/in-situ/combined.hic","mode":6,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":1989,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50,"unit_res":"BP","matrix":"observed","norm":"NONE","hasChr":1,"bin_size":0,"d_binsize":50000},"metadata":{"md5":["27003"],"md7":["13049"]},"details":{"Juicebox path":"Rao and Huntley et al. | Cell 2014 > HMEC (human) > in situ > combined (395M)","Publication":"Rao and Huntley et al. | Cell 2014"}},{"type":"cool","name":"HMEC_1in_situ_1combined","url":"hg19/HMEC_1in_situ_1combined.multi.cool","mode":6,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":1989,"ncolorscore":0,"pfilterscore":0,"nfilterscore":0,"height":50,"unit_res":"BP","matrix":"observed","norm":"NONE","hasChr":1,"bin_size":0,"d_binsize":50000},"metadata":{"md5":["27003"],"md7":["13049"]},"details":{"Juicebox path":"Rao and Huntley et al. | Cell 2014 > HMEC (human) > in situ > combined (395M)","Publication":"Rao and Huntley et al. | Cell 2014"}},{"type":"native_track","list":[{"name":"refGene","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#002EB8"},"metadata":{},"details":{"source":"UCSC Genome Browser","download date":"Jan 1, 2012"}},{"name":"rmsk_all","mode":7,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":35,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"showscoreidx":2,"scorenamelst":["Smith-Waterman score","SW score normalized by length","1-divergence%"],"scorescalelst":[{"type":0},{"type":0},{"type":0}],"metadata":{},"categories":{"1":["SINE - short interspersed nuclear elements","#cc0000"],"2":["LINE - long interspersed nuclear element","#FF6600"],"3":["LTR - long terminal repeat element","#006600"],"4":["DNA transposon","#4A72E8"],"5":["Simple repeat, micro-satellite","#AB833B"],"6":["Satellite repeat","#660000"],"7":["Low complexity repeat","#663333"],"8":["RNA repeat","#cc33ff"],"9":["Other repeats","#488E8E"],"10":["Unknown","#5C5C5C"],"-1":["no information","transparent"]}}]},{"type":"metadata","vocabulary_set":{"md1":"https://vizhub.wustl.edu/metadata/human/Samples","md2":"https://vizhub.wustl.edu/metadata/human/Donor","md3":"https://vizhub.wustl.edu/metadata/Experimental_assays","md4":"https://vizhub.wustl.edu/metadata/Institutions","md5":"http://vizhub.wustl.edu/metadata/Experimental_assays","md6":"http://vizhub.wustl.edu/metadata/Institutions","md7":"http://vizhub.wustl.edu/metadata/human/Samples","md8":"http://vizhub.wustl.edu/metadata/human/Donor"},"show_terms":{"md1":["Sample"],"md3":["Assay"],"md7":["Sample"],"md5":["Assay"]}},{"type":"coordinate_override","coord":"chr18,37978193,chr18,38974052"}]