[{"type":"bigWig","name":"GBM1_CNV","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM1_CNV.bw","mode":"show","qtc":{"anglescale":1,"pr":204,"pg":255,"pb":255,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":15,"summeth":1},"annotation":["14048","26002","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM2_CNV","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM2_CNV.bw","mode":"show","qtc":{"anglescale":1,"pr":204,"pg":255,"pb":255,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":15,"summeth":1},"annotation":["14048","26002","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM3_CNV","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM3_CNV.bw","mode":"show","qtc":{"anglescale":1,"pr":204,"pg":255,"pb":255,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":15,"summeth":1},"annotation":["14048","26002","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM4_CNV","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM4_CNV.bw","mode":"show","qtc":{"anglescale":1,"pr":204,"pg":255,"pb":255,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":15,"summeth":1},"annotation":["14048","26002","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM5_CNV","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM5_CNV.bw","mode":"show","qtc":{"anglescale":1,"pr":204,"pg":255,"pb":255,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":15,"summeth":1},"annotation":["14048","26002","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM1_MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM1_MRE.CNV.bw","mode":"show","qtc":{"anglescale":1,"pr":0,"pg":102,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"annotation":["14048","21001","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM2_MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM2_MRE.CNV.bw","mode":"show","qtc":{"anglescale":1,"pr":0,"pg":102,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"annotation":["14048","21001","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM3_MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM3_MRE.CNV.bw","mode":"show","qtc":{"anglescale":1,"pr":0,"pg":102,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"annotation":["14048","21001","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM4_MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM4_MRE.CNV.bw","mode":"show","qtc":{"anglescale":1,"pr":0,"pg":102,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"annotation":["14048","21001","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM5_MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM5_MRE.CNV.bw","mode":"show","qtc":{"anglescale":1,"pr":0,"pg":102,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"annotation":["14048","21001","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"Normal_1_MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBMNormal1_MRE.bw","mode":"show","qtc":{"anglescale":1,"pr":0,"pg":102,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"annotation":["14048","21001","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"Normal_2_MRE","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBMNormal2_MRE.bw","mode":"show","qtc":{"anglescale":1,"pr":0,"pg":102,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"annotation":["14048","21001","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM1_MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM1_MeDIP.CNV.bw","mode":"show","qtc":{"anglescale":1,"pr":153,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"annotation":["14048","21003","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM2_MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM2_MeDIP.CNV.bw","mode":"show","qtc":{"anglescale":1,"pr":153,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"annotation":["14048","21003","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM3_MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM3_MeDIP.CNV.bw","mode":"show","qtc":{"anglescale":1,"pr":153,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"annotation":["14048","21003","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM4_MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM4_MeDIP.CNV.bw","mode":"show","qtc":{"anglescale":1,"pr":153,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"annotation":["14048","21003","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM5_MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM5_MeDIP.CNV.bw","mode":"show","qtc":{"anglescale":1,"pr":153,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"annotation":["14048","21003","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"Normal_1_MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBMNormal1_MeDIP.bw","mode":"show","qtc":{"anglescale":1,"pr":0,"pg":139,"pb":69,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"annotation":["14048","21003","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"Normal_2_MeDIP","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBMNormal2_MeDIP.bw","mode":"show","qtc":{"anglescale":1,"pr":0,"pg":139,"pb":69,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"annotation":["14048","21003","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM1_DMR","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM1_DMR.bw","mode":"show","qtc":{"anglescale":1,"pr":238,"pg":180,"pb":34,"nr":30,"ng":144,"nb":255,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":15,"summeth":1},"annotation":["14048","30025"],"custom_annotation":["methylMnM","bigWig"]},{"type":"bigWig","name":"GBM2_DMR","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM2_DMR.bw","mode":"show","qtc":{"anglescale":1,"pr":238,"pg":180,"pb":34,"nr":30,"ng":144,"nb":255,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":15,"summeth":1},"annotation":["14048","30025"],"custom_annotation":["methylMnM","bigWig"]},{"type":"bigWig","name":"GBM3_DMR","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM3_DMR.bw","mode":"show","qtc":{"anglescale":1,"pr":238,"pg":180,"pb":34,"nr":30,"ng":144,"nb":255,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":15,"summeth":1},"annotation":["14048","30025"],"custom_annotation":["methylMnM","bigWig"]},{"type":"bigWig","name":"GBM4_DMR","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM4_DMR.bw","mode":"show","qtc":{"anglescale":1,"pr":238,"pg":180,"pb":34,"nr":30,"ng":144,"nb":255,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":15,"summeth":1},"annotation":["14048","30025"],"custom_annotation":["methylMnM","bigWig"]},{"type":"bigWig","name":"GBM5_DMR","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM5_DMR.bw","mode":"show","qtc":{"anglescale":1,"pr":238,"pg":180,"pb":34,"nr":30,"ng":144,"nb":255,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":15,"summeth":1},"annotation":["14048","30025"],"custom_annotation":["methylMnM","bigWig"]},{"type":"bigWig","name":"GBM1_H3K4me3_ChIP-seq","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM1_H3K4me3.bw","mode":"show","qtc":{"anglescale":1,"pr":238,"pg":64,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"annotation":["14048","22009","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM2_H3K4me3_ChIP-seq","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM2_H3K4me3.bw","mode":"show","qtc":{"anglescale":1,"pr":238,"pg":64,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"annotation":["14048","22009","30025"],"custom_annotation":["bigWig"]},{"type":"bigWig","name":"GBM5_H3K4me3_ChIP-seq","url":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/GBM5_H3K4me3.bw","mode":"show","qtc":{"anglescale":1,"pr":238,"pg":64,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1},"annotation":["14048","22009","30025"],"custom_annotation":["bigWig"]},{"type":"native_track","list":[{"name":"refGene","mode":"full","qtc":{"anglescale":1,"pr":0,"pg":77,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"rgb(0,0,0)","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"rgb(0,77,153)"}},{"name":"rmsk_ensemble","mode":"show","qtc":{"anglescale":1,"height":15},"categories":{"1":["SINE - short interspersed nuclear elements","#cc0000"],"2":["LINE - long interspersed nuclear element","#FF6600"],"3":["LTR - long terminal repeat element","#006600"],"4":["DNA transposon","#4A72E8"],"5":["Simple repeat, micro-satellite","#AB833B"],"6":["Satellite repeat","#660000"],"7":["Low complexity repeat","#663333"],"8":["RNA repeat","#cc33ff"],"9":["Other repeats","#488E8E"],"10":["Unknown","#5C5C5C"],"-1":["no information","transparent"]}}]},{"type":"coordinate_override","coord":"chr7,27054771,chr7,27374910"},{"type":"metadata","vocabulary":{"Computational Tools":["methylMnM","methylCRF"],"Data format":["BED","bigWig","bedGraph","interaction","categorical","methylC","annotation","BAM"]},"source":"http://wangftp.wustl.edu/~bzhang/CNV_GBM/DataHub_GBM_CNV"}]