[{"type":"interaction","name":"all-interaction-binat10kb","url":"http://enhancer.ucsd.edu/celso_espinoza/WUST_browser/W_browser/mES/hic/4-08-2018/resequencing_more-reads/playing/all_intra.count_in_10kb.sorted.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":2864,"ncolorscore":0,"pfilterscore":2,"nfilterscore":-2,"height":50},"metadata":{}},{"type":"interaction","name":"replicate1-202ngofDNA","url":"http://enhancer.ucsd.edu/celso_espinoza/WUST_browser/W_browser/mES/hic/4-08-2018/resequencing_more-reads/playing/final.22.bam.bam.intra.count_in_10kb.sorted.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":640,"ncolorscore":0,"pfilterscore":2,"nfilterscore":-2,"height":50},"metadata":{}},{"type":"interaction","name":"replicate2-303ngofDNA","url":"http://enhancer.ucsd.edu/celso_espinoza/WUST_browser/W_browser/mES/hic/4-08-2018/resequencing_more-reads/playing/final.23.bam.bam.intra.count_in_10kb.sorted.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":1582,"ncolorscore":0,"pfilterscore":2,"nfilterscore":-2,"height":50},"metadata":{}},{"type":"interaction","name":"replicate3-404ngofDNA","url":"http://enhancer.ucsd.edu/celso_espinoza/WUST_browser/W_browser/mES/hic/4-08-2018/resequencing_more-reads/playing/final.24.bam.bam.intra.count_in_10kb.sorted.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":682,"ncolorscore":0,"pfilterscore":2,"nfilterscore":-2,"height":50},"metadata":{}},{"type":"interaction","name":"all165SNPs","url":"http://enhancer.ucsd.edu/celso_espinoza/WUST_browser/W_browser/mES/4cnchiphic/chip-hic/h3k27ac_rep1_rep2_3-17-2018/plac-seq-rep1-n-rep2.2.sorted.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":0,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":184,"pg":0,"pb":138,"nr":0,"ng":99,"nb":133,"pcolorscore":0,"ncolorscore":0,"pfilterscore":2,"nfilterscore":-2,"height":50},"metadata":{}},{"type":"interaction","name":"chip-hic-rep1-10kb","url":"http://enhancer.ucsd.edu/celso_espinoza/WUST_browser/W_browser/mES/4cnchiphic/chip-hic/h3k27ac_rep1_rep2_3-17-2018/final.7.bam.bam.2.2.count_in_10kb.sorted.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":1,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":61,"pg":184,"pb":131,"nr":0,"ng":99,"nb":133,"pcolorscore":40,"ncolorscore":0,"pfilterscore":2,"nfilterscore":-2,"height":50},"metadata":{}},{"type":"interaction","name":"chip-hic-rep2-10kb","url":"http://enhancer.ucsd.edu/celso_espinoza/WUST_browser/W_browser/mES/4cnchiphic/chip-hic/h3k27ac_rep1_rep2_3-17-2018/final.8.bam.bam.2.2.count_in_10kb.sorted.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":1,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":61,"pg":184,"pb":131,"nr":0,"ng":99,"nb":133,"pcolorscore":40,"ncolorscore":0,"pfilterscore":2,"nfilterscore":-2,"height":50},"metadata":{}},{"type":"interaction","name":"chip-hic-rep1nrep2-10kb","url":"http://enhancer.ucsd.edu/celso_espinoza/WUST_browser/W_browser/mES/4cnchiphic/chip-hic/h3k27ac_rep1_rep2_3-17-2018/plac-seq-rep1-n-rep2.2.count_in_10kb.sorted.gz","mode":4,"qtc":{"anglescale":1,"textcolor":"#000000","thtype":1,"fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"pr":61,"pg":184,"pb":131,"nr":0,"ng":99,"nb":133,"pcolorscore":40,"ncolorscore":0,"pfilterscore":2,"nfilterscore":-2,"height":50},"metadata":{}},{"type":"native_track","list":[{"name":"refGene","mode":3,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#002EB8"},"metadata":{},"details":{"source":"UCSC Genome Browser","download date":"Jan 1, 2012"}},{"name":"rmsk_all","mode":7,"qtc":{"anglescale":1,"pr":255,"pg":0,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":35,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#336666"},"showscoreidx":2,"scorenamelst":["Smith-Waterman score","SW score normalized by length","1-divergence%"],"scorescalelst":[{"type":0},{"type":0},{"type":0}],"metadata":{},"categories":{"1":["SINE - short interspersed nuclear elements","#cc0000"],"2":["LINE - long interspersed nuclear element","#FF6600"],"3":["LTR - long terminal repeat element","#006600"],"4":["DNA transposon","#4A72E8"],"5":["Simple repeat, micro-satellite","#AB833B"],"6":["Satellite repeat","#660000"],"7":["Low complexity repeat","#663333"],"8":["RNA repeat","#cc33ff"],"9":["Other repeats","#488E8E"],"10":["Unknown","#5C5C5C"],"-1":["no information","transparent"]}}]},{"type":"metadata","vocabulary_set":{}},{"type":"coordinate_override","coord":"chr7,42696427,chr7,47909937"}]