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It can interact with G/C-rich motifs from the serotonin receptor promoter.","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-17824","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"PCR1x","protocol description":"1-cycle of PCR (Myers)","controlid":"SL517","labexpid":"SL746","replicate":"1","replicate description":"tier 1","original_filename":"GSM803363_hg19_wgEncodeHaibTfbsGm12878Sp1Pcr1xRawRep2.bigWig"},"geolst":["GSM803363"]},{"type":"bigWig","name":"Stanford ChipSeq GM12878 CHD1","url":"http://egg.wustl.edu/d/hg19/GSM935301_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","22043","30018"],"details":{"lab":"Stanford","lab description":"Snyder - Stanford University","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12878","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"CHD1_(A301-218A)","antibody antibodydescription":"Rabbit Polyclonal Antigen Affinity Purified, Unconjugated, Liquid. 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Alternate names for CHD1 include chromodomain-helicase-DNA-binding protein 1, ATP-dependent helicase CHD1, and DKFZp686E2337.","antibody vendorname":"Bethyl Laboratories","antibody vendorid":"A301-218A","control":"IgG-mus","control description":"Input signal from Normal Mouse IgG ChIP-seq.","controlid":"wgEncodeEH000706","replicate":"1","original_filename":"GSM935301_hg19_wgEncodeSydhTfbsGm12878Chd1a301218aIggmusSig.bigWig"},"geolst":["GSM935301"]},{"type":"bigWig","name":"Stanford ChipSeq GM12878 Nrf1","url":"http://egg.wustl.edu/d/hg19/GSM935309_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24635","30018"],"details":{"lab":"Stanford","lab description":"Snyder - Stanford University","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12878","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"Nrf1","antibody antibodydescription":"Mouse monoclonal, Immunogen corresponding to amino acids 201-286 of Human NRF1. Antibody Target: NRF1","antibody targetdescription":"NRF1 is the mammalian homolog to the erect wing (ewg) Drosophila protein that is required for proper development of the central nervous system and indirect flight muscles. In mammals NRF1 functions as a transcription factor that activates the expression of the EIF2S1 (EIF-alpha) gene. This protein links the transcriptional modulation of key metabolic genes to cellular growth and development, and has been implicated in the control of nuclear genes required for respiration, heme biosynthesis and mitochondrialDNA transcription and replication. NRF1 forms a homodimer and binds DNA as a dimer. NRF1 shows a nuclear localization and is expressed widely in embryonic, fetal and adult tissues. Phosphorylation of NRF1 enhances DNA binding.","antibody vendorname":"Abcam","antibody vendorid":"ab55744","control":"IgG-mus","control description":"Input signal from Normal Mouse IgG ChIP-seq.","controlid":"wgEncodeEH000706","replicate":"1","original_filename":"GSM935309_hg19_wgEncodeSydhTfbsGm12878Nrf1IggmusSig.bigWig"},"geolst":["GSM935309"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 ELF1","url":"http://egg.wustl.edu/d/hg19/GSM803496_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24051","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"ELF1_(SC-631)","antibody antibodydescription":"Rabbit polyclonal IgG, epitope mapping at the C-terminus of Elf-1 of human origin.","antibody targetdescription":"This gene encodes an E26 transformation-specific related transcription factor.  The encoded protein is primarily expressed in lymphoid cells and acts as both an enhancer and a repressor to regulate transcription of various genes.  Alternative splicing results in multiple transcript variants. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-631","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v041610.1","protocol description":"2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)","controlid":"SL1613","labexpid":"SL2253","replicate":"1","replicate description":"tier 1","original_filename":"GSM803496_hg19_wgEncodeHaibTfbsGm12878Elf1sc631V0416101RawRep2.bigWig"},"geolst":["GSM803496"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 ELF1","url":"http://egg.wustl.edu/d/hg19/GSM803496_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24051","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"ELF1_(SC-631)","antibody antibodydescription":"Rabbit polyclonal IgG, epitope mapping at the C-terminus of Elf-1 of human origin.","antibody targetdescription":"This gene encodes an E26 transformation-specific related transcription factor.  The encoded protein is primarily expressed in lymphoid cells and acts as both an enhancer and a repressor to regulate transcription of various genes.  Alternative splicing results in multiple transcript variants. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-631","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v041610.1","protocol description":"2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)","controlid":"SL1613","labexpid":"SL2253","replicate":"1","replicate description":"tier 1","original_filename":"GSM803496_hg19_wgEncodeHaibTfbsGm12878Elf1sc631V0416101RawRep1.bigWig"},"geolst":["GSM803496"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 Egr-1","url":"http://egg.wustl.edu/d/hg19/GSM803434_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24050","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"Egr-1","antibody antibodydescription":"Rabbit polyclonal, EGR-1 (588).","antibody targetdescription":"Egr-1, Egr-2, Egr-3 and Egr-4 are nuclear transcription factors belonging to the Egr C2H2-type zinc-finger protein family and containing three C2H2-type zinc fingers. As immediate early proteins, Egr transcription factors are rapidly induced by diverse extracellular stimuli. Egr proteins are subject to tight differential control through diverse mechanisms at several levels of regulation including transcriptional, translational and post-translational (including glyco- sylation, phosphorylation and redox) mechanisms and protein-protein inter- action. Egr-1 binds to the DNA sequence 5'-CGCCCCCGC-3' (EGR-site), there- by activating transcription of target genes whose products are required for mitogenisis and differentiation. Egr-2 binds specific DNA sites located in the promoter region of HoxA4. Egr-2 defects cause congenital hypomyelination neuropathy (also designated Charcot-Marie-tooth disease) and Dejerine- Sottas neuropathology (also designated hereditary motor and sensory neuro- pathy III. Egr-3 is involved in muscle spindle development and is expressed in T cells 20 minutes following activation. EGR-4 binds to the EGR consensus motif GCGTGGGCG, functions as a transcriptional repressor, and displays autoregulatory activities, downregulating its on gene promoter in a dose dependent manner.","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-110","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v041610.1","protocol description":"2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)","controlid":"SL1613","labexpid":"SL3579","replicate":"1","replicate description":"tier 1","original_filename":"GSM803434_hg19_wgEncodeHaibTfbsGm12878Egr1V0416101RawRep2.bigWig"},"geolst":["GSM803434"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 Egr-1","url":"http://egg.wustl.edu/d/hg19/GSM1010730_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24050","30015"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"Rabbit polyclonal, EGR-1 (588). Antibody Target: EGR1","antibody targetdescription":"Egr-1, Egr-2, Egr-3 and Egr-4 are nuclear transcription factors belonging to the Egr C2H2-type zinc-finger protein family and containing three C2H2-type zinc fingers. As immediate early proteins, Egr transcription factors are rapidly induced by diverse extracellular stimuli. Egr proteins are subject to tight differential control through diverse mechanisms at several levels of regulation including transcriptional, translational and post-translational (including glyco- sylation, phosphorylation and redox) mechanisms and protein-protein inter- action. Egr-1 binds to the DNA sequence 5'-CGCCCCCGC-3' (EGR-site), there- by activating transcription of target genes whose products are required for mitogenisis and differentiation. Egr-2 binds specific DNA sites located in the promoter region of HoxA4. Egr-2 defects cause congenital hypomyelination neuropathy (also designated Charcot-Marie-tooth disease) and Dejerine- Sottas neuropathology (also designated hereditary motor and sensory neuro- pathy III. Egr-3 is involved in muscle spindle development and is expressed in T cells 20 minutes following activation. EGR-4 binds to the EGR consensus motif GCGTGGGCG, functions as a transcriptional repressor, and displays autoregulatory activities, downregulating its on gene promoter in a dose dependent manner.","antibody vendorname":"Santa Cruz Biotechnology","antibody vendorid":"sc-110","controlid":"SL218","labexpid":"SL482","softwareversion":"MACS","cell sex":"F","antibody":"Egr-1","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"PCR2x","protocol description":"a 25-cycle round of PCR and an additional 15-cycle round of PCR after gel size selection (Myers)","replicate":"3","original_filename":"GSM1010730_hg19_wgEncodeHaibTfbsGm12878Egr1Pcr2xRawRep3.bigWig"},"geolst":["GSM1010730"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 Egr-1","url":"http://egg.wustl.edu/d/hg19/GSM803434_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24050","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"Egr-1","antibody antibodydescription":"Rabbit polyclonal, EGR-1 (588).","antibody targetdescription":"Egr-1, Egr-2, Egr-3 and Egr-4 are nuclear transcription factors belonging to the Egr C2H2-type zinc-finger protein family and containing three C2H2-type zinc fingers. As immediate early proteins, Egr transcription factors are rapidly induced by diverse extracellular stimuli. Egr proteins are subject to tight differential control through diverse mechanisms at several levels of regulation including transcriptional, translational and post-translational (including glyco- sylation, phosphorylation and redox) mechanisms and protein-protein inter- action. Egr-1 binds to the DNA sequence 5'-CGCCCCCGC-3' (EGR-site), there- by activating transcription of target genes whose products are required for mitogenisis and differentiation. Egr-2 binds specific DNA sites located in the promoter region of HoxA4. Egr-2 defects cause congenital hypomyelination neuropathy (also designated Charcot-Marie-tooth disease) and Dejerine- Sottas neuropathology (also designated hereditary motor and sensory neuro- pathy III. Egr-3 is involved in muscle spindle development and is expressed in T cells 20 minutes following activation. EGR-4 binds to the EGR consensus motif GCGTGGGCG, functions as a transcriptional repressor, and displays autoregulatory activities, downregulating its on gene promoter in a dose dependent manner.","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-110","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v041610.1","protocol description":"2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)","controlid":"SL1613","labexpid":"SL3579","replicate":"1","replicate description":"tier 1","original_filename":"GSM803434_hg19_wgEncodeHaibTfbsGm12878Egr1V0416101RawRep1.bigWig"},"geolst":["GSM803434"]},{"type":"bigWig","name":"Stanford ChipSeq GM12878 MafK","url":"http://egg.wustl.edu/d/hg19/GSM1003616_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24639","30018"],"details":{"lab":"Stanford","lab description":"Snyder - Stanford University","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12878","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"MafK_(ab50322)","antibody antibodydescription":"Rabbit polyclonal. Raised against synthetic peptide: TTNPKPNKALKVKKEA conjugated to KLH by a C-terminal Cysteine residue linker, corresponding to amino acids 2-17 of Human MAFK. Antibody Target: MafK","antibody targetdescription":"NFE2 DNA-binding activity consists of a heterodimer containing an 18-kD Maf protein (MafF, MafG, or MafK) and p45. Both subunits are members of the activator protein-1 superfamily of basic leucine zipper (bZIP)proteins. Since they lack a putative transactivation domain, small Mafs behave as transcriptional repressors when they dimerize among themselves. They serve as transcriptional activators by dimerizing with other (usually larger) bZip proteins and recruiting them to specific DNA-binding sites.","antibody vendorname":"Abcam","antibody vendorid":"ab50322","control":"IgG-mus","control description":"Input signal from Normal Mouse IgG ChIP-seq.","controlid":"wgEncodeEH000706","original_filename":"GSM1003616_hg19_wgEncodeSydhTfbsGm12878MafkIggmusSig.bigWig"},"geolst":["GSM1003616"]},{"type":"bigWig","name":"USC ChipSeq GM12878 TR4","url":"http://egg.wustl.edu/d/hg19/GSM935480_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24644","30016"],"details":{"lab":"USC","lab description":"Farnham - University of Southern California","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12878","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"TR4","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: TR4","antibody targetdescription":"(Also: NR2C2) Members of the nuclear hormone receptor family, such as NR2C2, act as ligand-activated transcription factors. The proteins have an N-terminal transactivation domain, a central DNA-binding domain with 2 zinc fingers, and a ligand-binding domain at the C terminus.","antibody vendorname":"Donated by Dr. J.D.Engel, University of Michigan","antibody vendorid":"TR4","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000625","labversion":"Fragmented using Bioruptor, precipitated with StaphA PeakSeq 1.0 (fdr 0.001), samples were 71% and 72% matching in the top 40% overlap analysis.","replicate":"1","original_filename":"GSM935480_hg19_wgEncodeSydhTfbsGm12878Tr4StdSig.bigWig"},"geolst":["GSM935480"]},{"type":"bigWig","name":"USC ChipSeq GM12878 YY1","url":"http://egg.wustl.edu/d/hg19/GSM935482_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24025","30016"],"details":{"lab":"USC","lab description":"Farnham - University of Southern California","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12878","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"YY1","antibody antibodydescription":"Rabbit polyclonal. Antibody Target: YY1","antibody targetdescription":"YIN YANG 1 transcription factor belongs to the GLI-Kruppel class of zinc finger proteins.","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-1703","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000625","labversion":"Fragmented using Bioruptor, precipitated with Staph A,","replicate":"1","softwareversion":"PeakSeq1.0 (fdr 0.001)","original_filename":"GSM935482_hg19_wgEncodeSydhTfbsGm12878Yy1StdSig.bigWig"},"geolst":["GSM935482"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 YY1","url":"http://egg.wustl.edu/d/hg19/GSM803406_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24025","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"YY1_(SC-281)","antibody antibodydescription":"Rabbit polyclonal IgG, epitope mapping at the C-terminus of YY1 of human origin","antibody targetdescription":"YY1 is a ubiquitously distributed transcription factor belonging to the GLI-Kruppel class of zinc finger proteins.  The protein is involved in repressing and activating a diverse number of promoters.  YY1 may direct histone deacetylases and histone acetyltransferases to a promoter in order to activate or repress the promoter, thus implicating histone modification in the function of YY1","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-281","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"PCR1x","protocol description":"1-cycle of PCR (Myers)","controlid":"SL1394","labexpid":"SL1475","replicate":"1","replicate description":"tier 1","original_filename":"GSM803406_hg19_wgEncodeHaibTfbsGm12878Yy1sc281Pcr1xRawRep1.bigWig"},"geolst":["GSM803406"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 YY1","url":"http://egg.wustl.edu/d/hg19/GSM803406_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24025","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"YY1_(SC-281)","antibody antibodydescription":"Rabbit polyclonal IgG, epitope mapping at the C-terminus of YY1 of human origin","antibody targetdescription":"YY1 is a ubiquitously distributed transcription factor belonging to the GLI-Kruppel class of zinc finger proteins.  The protein is involved in repressing and activating a diverse number of promoters.  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Recommended for detection of RXRalpha of m, r and h origin by WB, IP, IF, IHC(P) and ELISA.","antibody targetdescription":"Retinoid X receptors (RXRs) and retinoic acid receptors (RARs), are nuclear receptors that mediate the biological effects of retinoids by their involvement in retinoic acid-mediated gene activation. These receptors exert their action by binding, as homodimers or heterodimers, to specific sequences in the promoters of target genes and regulating their transcription. The protein encoded by this gene is a member of the steroid and thyroid hormone receptor superfamily of transcriptional regulators.","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-553","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"PCR1x","protocol description":"1-cycle of PCR (Myers)","controlid":"SL1394","labexpid":"SL1063","replicate":"1","replicate description":"tier 1","original_filename":"GSM803341_hg19_wgEncodeHaibTfbsGm12878RxraPcr1xRawRep2.bigWig"},"geolst":["GSM803341"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 RXRA","url":"http://egg.wustl.edu/d/hg19/GSM803341_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24019","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"RXRA","antibody antibodydescription":"RXRa(D-20) is an affinity purified rabbit polyclonal antibody raised against a peptide mapping at the N-terminus of RXRalpha of human origin. Recommended for detection of RXRalpha of m, r and h origin by WB, IP, IF, IHC(P) and ELISA.","antibody targetdescription":"Retinoid X receptors (RXRs) and retinoic acid receptors (RARs), are nuclear receptors that mediate the biological effects of retinoids by their involvement in retinoic acid-mediated gene activation. These receptors exert their action by binding, as homodimers or heterodimers, to specific sequences in the promoters of target genes and regulating their transcription. The protein encoded by this gene is a member of the steroid and thyroid hormone receptor superfamily of transcriptional regulators.","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-553","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"PCR1x","protocol description":"1-cycle of PCR (Myers)","controlid":"SL1394","labexpid":"SL1063","replicate":"1","replicate description":"tier 1","original_filename":"GSM803341_hg19_wgEncodeHaibTfbsGm12878RxraPcr1xRawRep1.bigWig"},"geolst":["GSM803341"]},{"type":"bigWig","name":"Yale ChipSeq GM12878 c-Fos","url":"http://egg.wustl.edu/d/hg19/GSM935409_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24608","30017"],"details":{"lab":"Yale","lab description":"Snyder - Yale University","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12878","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"c-Fos","antibody antibodydescription":"Rabbit polyclonal to amino acids 210-335 mapping at the C-terminus of c-Fos of human origin. Antibody Target: c-Fos","antibody targetdescription":"Heterodimer of Fos and Jun constitute transcription factor AP1.  Proto-oncogene c-Jun is a leucine-zipper.","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-7202","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000625","replicate":"1","original_filename":"GSM935409_hg19_wgEncodeSydhTfbsGm12878CfosStdSig.bigWig"},"geolst":["GSM935409"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 SRF","url":"http://egg.wustl.edu/d/hg19/GSM803477_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24023","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - 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Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"SRF","antibody antibodydescription":"Rabbit polyclonal","antibody targetdescription":"Serum response transcription factor","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-335","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v041610.1","protocol description":"2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)","controlid":"SL1613","labexpid":"SL3578","replicate":"1","replicate description":"tier 1","original_filename":"GSM803477_hg19_wgEncodeHaibTfbsGm12878SrfV0416101RawRep2.bigWig"},"geolst":["GSM803477"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 SRF","url":"http://egg.wustl.edu/d/hg19/GSM803350_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24023","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"SRF","antibody antibodydescription":"Rabbit polyclonal","antibody targetdescription":"Serum response transcription factor","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-335","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"PCR2x","protocol description":"2-cycles of PCR (Myers)","controlid":"SL217","labexpid":"SL291","replicate":"1","replicate description":"tier 1","original_filename":"GSM803350_hg19_wgEncodeHaibTfbsGm12878SrfPcr2xRawRep1.bigWig"},"geolst":["GSM803350"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 SRF","url":"http://egg.wustl.edu/d/hg19/GSM803350_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24023","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - 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Antibody Target: BRCA1","antibody targetdescription":"Nuclear phosphoprotein that plays a role in maintaining genomic stability, and acts as a tumor suppressor. Associates with RNA polymerase II, and through the C-terminal domain, also interacts with histone deacetylase complexes. Plays a role in transcription, DNA repair of double-stranded breaks, and recombination. Mutations in this gene are responsible for approximately 40% of inherited breast cancers and more than 80% of inherited breast and ovarian cancers.","antibody vendorname":"Bethyl Labratories","antibody vendorid":"A300-000A","control":"IgG-mus","control description":"Input signal from Normal Mouse IgG ChIP-seq.","controlid":"wgEncodeEH000706","replicate":"1","original_filename":"GSM935377_hg19_wgEncodeSydhTfbsGm12878Brca1a300IggmusSig.bigWig"},"geolst":["GSM935377"]},{"type":"bigWig","name":"Stanford ChipSeq GM12878 COREST","url":"http://egg.wustl.edu/d/hg19/GSM935583_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24617","30018"],"details":{"lab":"Stanford","lab description":"Snyder - Stanford University","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12878","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"COREST_(sc-30189)","antibody antibodydescription":"Rabbit polyclonal, epitope corresponding to amino acids 246-310 mapping within an internal region of CoREST of human origin recommended for detection of CoREST of mouse, rat and human origin. Antibody Target: COREST (sc30189)","antibody targetdescription":"Essential component of the BHC complex, a corepressor complex that represses transcription of neuron-specific genes in non-neuronal cells.  In the BHC complex, it serves as a molecular beacon for the recruitment of molecular machinery, including MeCP2 and SUV39H1, that imposes silencing across a chromosomal interval. Plays a central role in demethylation of Lys-4 of histone H3 by promoting demethylase activity of KDM1A on core histones and nucleosomal substrates.","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-30189","control":"IgG-mus","control description":"Input signal from Normal Mouse IgG ChIP-seq.","controlid":"wgEncodeEH000706","replicate":"1","original_filename":"GSM935583_hg19_wgEncodeSydhTfbsGm12878Corestsc30189IggmusSig.bigWig"},"geolst":["GSM935583"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 MEF2C","url":"http://egg.wustl.edu/d/hg19/GSM803420_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24053","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"MEF2C_(SC-13268)","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping near the C-terminus of MEF2C of human origin.","antibody targetdescription":"This locus encodes a member of the MADS box transcription enhancer factor 2 (MEF2) family of proteins, which play a role in myogenesis. The encoded protein, MEF2 polypeptide C, has both trans-activating and DNA binding activities.  This protein may play a role in maintaining the differentiated state of muscle cells. Mutations and deletions at this locus have been associated with severe mental retardation, stereotypic movements, epilepsy, and cerebral malformation.  Alternatively spliced transcript variants have been described. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-13268","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v041610.1","protocol description":"2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)","controlid":"SL1613","labexpid":"SL1654","replicate":"1","replicate description":"tier 1","original_filename":"GSM803420_hg19_wgEncodeHaibTfbsGm12878Mef2csc13268V0416101RawRep1.bigWig"},"geolst":["GSM803420"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 MEF2C","url":"http://egg.wustl.edu/d/hg19/GSM803420_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24053","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"MEF2C_(SC-13268)","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping near the C-terminus of MEF2C of human origin.","antibody targetdescription":"This locus encodes a member of the MADS box transcription enhancer factor 2 (MEF2) family of proteins, which play a role in myogenesis. The encoded protein, MEF2 polypeptide C, has both trans-activating and DNA binding activities.  This protein may play a role in maintaining the differentiated state of muscle cells. Mutations and deletions at this locus have been associated with severe mental retardation, stereotypic movements, epilepsy, and cerebral malformation.  Alternatively spliced transcript variants have been described. (provided by RefSeq)","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-13268","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v041610.1","protocol description":"2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)","controlid":"SL1613","labexpid":"SL1654","replicate":"1","replicate description":"tier 1","original_filename":"GSM803420_hg19_wgEncodeHaibTfbsGm12878Mef2csc13268V0416101RawRep2.bigWig"},"geolst":["GSM803420"]},{"type":"bigWig","name":"Stanford Nucleosome GM12878","url":"http://egg.wustl.edu/d/hg19/GSM920558_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","23005","30018"],"details":{"lab":"Stanford","lab description":"Snyder - Stanford University","datatype":"Nucleosome","datatype description":"Nucleosome Position","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","replicate":"1","original_filename":"GSM920558_hg19_wgEncodeSydhNsomeGm12878Sig.bigWig"},"geolst":["GSM920558"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 BCL3","url":"http://egg.wustl.edu/d/hg19/GSM803342_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24020","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"BCL3","antibody antibodydescription":"Bcl-3(C-14) is an affinity purified rabbit polyclonal antibody raised against a peptide mapping at the C-terminus of Bcl-3 of human origin. Recommended for detection of Bcl-3 of m, r and h origin by WB, IP, IF and ELISA.","antibody targetdescription":"This gene is a proto-oncogene candidate. It is identified by its translocation into the immunoglobulin alpha-locus in some cases of B-cell leukemia. The protein encoded by this gene contains seven ankyrin repeats, which are most closely related to those found in I kappa B proteins. This protein functions as a transcriptional co-activator that activates through its association with NF-kappa B homodimers. The expression of this gene can be induced by NF-kappa B, which forms a part of the autoregulatory loop that controls the nuclear residence of p50 NF-kappa B. (Provided by RefSeq).","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-185","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v041610.1","protocol description":"2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)","controlid":"SL1613","labexpid":"SL3728","replicate":"1","replicate description":"tier 1","original_filename":"GSM803342_hg19_wgEncodeHaibTfbsGm12878Bcl3V0416101RawRep1.bigWig"},"geolst":["GSM803342"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 BCL3","url":"http://egg.wustl.edu/d/hg19/GSM803342_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24020","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"BCL3","antibody antibodydescription":"Bcl-3(C-14) is an affinity purified rabbit polyclonal antibody raised against a peptide mapping at the C-terminus of Bcl-3 of human origin. 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(Provided by RefSeq).","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-185","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v041610.1","protocol description":"2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)","controlid":"SL1613","labexpid":"SL3728","replicate":"1","replicate description":"tier 1","original_filename":"GSM803342_hg19_wgEncodeHaibTfbsGm12878Bcl3V0416101RawRep2.bigWig"},"geolst":["GSM803342"]},{"type":"bigWig","name":"Bernstein GM12878 H3K79me2","url":"http://egg.wustl.edu/d/hg19/GSM733736_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":170,"pg":170,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":170,"__pg":170,"__pb":0,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","22022","30003"],"details":{"cell":"GM12878","cell organism":"Human","cell description":"lymphoblastoid","cell karyotype":"relatively normal","cell lineage":"International HapMap Project - CEPH/Utah - European Caucasion","cell sex":"F","antibody":"H3K79me2","antibody description":"Rabbit polyclonal antibody raised against a peptide containing K79 di-methylation","antibody target description":"H3K79me2 is a mark of the transcriptional transition region - the region between the initiation marks (K4me3, etc) and the elongation marks (K36me3).","antibody vendor name":"Active Motif","original_filename":"GSM733736_hg19_wgEncodeBroadHistoneGm12878H3k79me2StdSig.bigWig"},"geolst":["GSM733736"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 BCLAF1","url":"http://egg.wustl.edu/d/hg19/GSM803509_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24064","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"BCLAF1_(SC-101388)","antibody antibodydescription":"Mouse monoclonal IgG, raised against a synthetic peptide corresponding to a.a. 900-909 of BCLAF1 of human origin.","antibody targetdescription":"This gene encodes a transcriptional repressor that interacts with several members of the BCL2 family of proteins. Overexpression of this protein induces apoptosis, which can be suppressed by co-expression of BCL2 proteins (RefSeq).","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-101388","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v041610.1","protocol description":"2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)","controlid":"SL1395","labexpid":"SL1509","replicate":"1","replicate description":"tier 1","original_filename":"GSM803509_hg19_wgEncodeHaibTfbsGm12878Bclaf101388V0416101RawRep2.bigWig"},"geolst":["GSM803509"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 BCLAF1","url":"http://egg.wustl.edu/d/hg19/GSM803509_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24064","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"BCLAF1_(SC-101388)","antibody antibodydescription":"Mouse monoclonal IgG, raised against a synthetic peptide corresponding to a.a. 900-909 of BCLAF1 of human origin.","antibody targetdescription":"This gene encodes a transcriptional repressor that interacts with several members of the BCL2 family of proteins. 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Is associated with enhancers, and downstream of transcription starts.","antibody vendor name":"Abcam","original_filename":"GSM733772_hg19_wgEncodeBroadHistoneGm12878H3k4me1StdSig.bigWig"},"geolst":["GSM733772"]},{"type":"bigWig","name":"Stanford ChipSeq GM12878 STAT1","url":"http://egg.wustl.edu/d/hg19/GSM935612_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24620","30018"],"details":{"lab":"Stanford","lab description":"Snyder - Stanford University","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12878","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"STAT1","antibody antibodydescription":"rabbit polyclonal to STAT1 (alpha) p-91 (C-24). 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NFE2 has been shown to interact with CREB binding protein.","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-22827","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000625","replicate":"1","original_filename":"GSM935652_hg19_wgEncodeSydhTfbsGm12878Nfe2sc22827StdSig.bigWig"},"geolst":["GSM935652"]},{"type":"bigWig","name":"Stanford ChipSeq GM12878 Max","url":"http://egg.wustl.edu/d/hg19/GSM935518_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24066","30018"],"details":{"lab":"Stanford","lab description":"Snyder - Stanford University","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12878","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"Max","antibody antibodydescription":"Rabbit polyclonal IgG, epitope mapping at the C-terminus of Max of human origin. 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Multiple alternatively spliced transcript variants have been described for this gene but the full-length nature for some of them is unknown (RefSeq).","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-197","control":"IgG-mus","control description":"Input signal from Normal Mouse IgG ChIP-seq.","controlid":"wgEncodeEH000706","labversion":"This replaces a previous dataset for the cell line/antibody which was under sequenced due to technical limits at the time.","replicate":"1","original_filename":"GSM935518_hg19_wgEncodeSydhTfbsGm12878MaxIggmusSig.bigWig"},"geolst":["GSM935518"]},{"type":"bigWig","name":"Stanford ChipSeq GM12878 E2F4","url":"http://egg.wustl.edu/d/hg19/GSM935330_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24609","30018"],"details":{"lab":"Stanford","lab description":"Snyder - Stanford University","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12878","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"E2F4","antibody antibodydescription":"rabbit polyclonal. 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The encoded protein can activate transcription through pyrimidine-rich initiator (Inr) elements and E-box motifs (5'-CACGTG-3').","antibody vendorname":"abcam","antibody vendorid":"ab60931","control":"IgG-mus","control description":"Input signal from Normal Mouse IgG ChIP-seq.","controlid":"wgEncodeEH000706","replicate":"1","original_filename":"GSM935558_hg19_wgEncodeSydhTfbsGm12878Usf2IggmusSig.bigWig"},"geolst":["GSM935558"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 IRF4","url":"http://egg.wustl.edu/d/hg19/GSM803390_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24038","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"IRF4_(SC-6059)","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the C-terminus of IRF-4 of mouse origin.","antibody targetdescription":"The protein encoded by this gene belongs to the IRF (interferon regulatory factor) family.  It functions as a lymphocyte specific transcription factor and negatively regulates TLR signaling by selectively competing with IRF5.  A chromosomal translocation involving this gene and the IgH locus, t(6;14)(p25;q32), may be a cause of multiple myeloma (RefSeq).","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-6059","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"PCR1x","protocol description":"1-cycle of PCR (Myers)","controlid":"SL516","labexpid":"SL838","replicate":"1","replicate description":"tier 1","original_filename":"GSM803390_hg19_wgEncodeHaibTfbsGm12878Irf4sc6059Pcr1xRawRep1.bigWig"},"geolst":["GSM803390"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 IRF4","url":"http://egg.wustl.edu/d/hg19/GSM803390_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24038","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"IRF4_(SC-6059)","antibody antibodydescription":"Goat polyclonal IgG, epitope mapping at the C-terminus of IRF-4 of mouse origin.","antibody targetdescription":"The protein encoded by this gene belongs to the IRF (interferon regulatory factor) family.  It functions as a lymphocyte specific transcription factor and negatively regulates TLR signaling by selectively competing with IRF5.  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Also binds to multiple G/C-rich sites within the promoter of the Sp1 family of transcription factors.","antibody vendorname":"Abcam","antibody vendorid":"ab85725","control":"IgG-mus","control description":"Input signal from Normal Mouse IgG ChIP-seq.","controlid":"wgEncodeEH000706","replicate":"1","original_filename":"GSM935283_hg19_wgEncodeSydhTfbsGm12878Mazab85725IggmusSig.bigWig"},"geolst":["GSM935283"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 PAX5-N19","url":"http://egg.wustl.edu/d/hg19/GSM803362_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24026","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"PAX5-N19","antibody antibodydescription":"Goat polyclonal IgG, 200 ?g/ml. 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Marks promoters and enhancers. Most CpG islands are marked by H3K4me2 in primary cells. May be associated also with poised promoters.","antibody vendor name":"Abcam","original_filename":"GSM733769_hg19_wgEncodeBroadHistoneGm12878H3k4me2StdSig.bigWig"},"geolst":["GSM733769"]},{"type":"bigWig","name":"Bernstein GM12878 H3K9ac","url":"http://egg.wustl.edu/d/hg19/GSM733677_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":46,"pg":92,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":46,"__pg":92,"__pb":0,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","22013","30003"],"details":{"cell":"GM12878","cell organism":"Human","cell description":"lymphoblastoid","cell karyotype":"relatively normal","cell lineage":"International HapMap Project - CEPH/Utah - European Caucasion","cell sex":"F","antibody":"H3K9ac","antibody description":"rabbit polyclonal","antibody target description":"Histone H3 (acetyl K9). As with H3K27ac, associated with transcriptional initiation and open chromatin structure.","antibody vendor name":"Abcam","original_filename":"GSM733677_hg19_wgEncodeBroadHistoneGm12878H3k9acStdSig.bigWig"},"geolst":["GSM733677"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 CEBPB","url":"http://egg.wustl.edu/d/hg19/GSM1010850_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24624","30015"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"Rabbit polyclonal IgG, epitope mapping at the C-terminus of CEBPB of rat origin. 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In addition, the encoded protein can bind the promoter and upstream element and stimulate the expression of the collagen type I gene (provided by RefSeq).","antibody vendorname":"Santa Cruz Biotechnology","antibody vendorid":"sc-150","controlid":"SL6022","labexpid":"SL9542,SL8084","softwareversion":"MACS","cell sex":"F","antibody":"CEBPB_(SC-150)","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v042211.1","protocol description":"Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)","replicate":"1,2","original_filename":"GSM1010850_hg19_wgEncodeHaibTfbsGm12878Cebpbsc150V0422111RawRep1.bigWig"},"geolst":["GSM1010850"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 CEBPB","url":"http://egg.wustl.edu/d/hg19/GSM1010850_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24624","30015"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"Rabbit polyclonal IgG, epitope mapping at the C-terminus of CEBPB of rat origin. 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In addition, the encoded protein can bind the promoter and upstream element and stimulate the expression of the collagen type I gene (provided by RefSeq).","antibody vendorname":"Santa Cruz Biotechnology","antibody vendorid":"sc-150","controlid":"SL6022","labexpid":"SL9542,SL8084","softwareversion":"MACS","cell sex":"F","antibody":"CEBPB_(SC-150)","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v042211.1","protocol description":"Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)","replicate":"1,2","original_filename":"GSM1010850_hg19_wgEncodeHaibTfbsGm12878Cebpbsc150V0422111RawRep2.bigWig"},"geolst":["GSM1010850"]},{"type":"bigWig","name":"Harvard ChipSeq GM12878 ZZZ3","url":"http://egg.wustl.edu/d/hg19/GSM935483_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24672","30020"],"details":{"lab":"Harvard","lab description":"Struhl - Harvard University","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12878","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"ZZZ3","antibody antibodydescription":"Rabbit Polyclonal anti-human ZZZ3, Immunogen: Synthetic peptide coupled to Ovalbumin (Name PI130, sequence CGNNNGRTTDLKQQSTRESW). 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The structure of the ZZ domain shows that it belongs to the family of cross-brace zinc finger motifs that include the PHD, RING, and FYVE domains.","antibody vendorname":"Lazlo Tora, Institut de G?n?tique et de Biologie Mol?culaire et Cellulaire","antibody vendorid":"ZZZ3","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000625","replicate":"1","original_filename":"GSM935483_hg19_wgEncodeSydhTfbsGm12878Zzz3StdSig.bigWig"},"geolst":["GSM935483"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 ZBTB33","url":"http://egg.wustl.edu/d/hg19/GSM803392_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24039","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"ZBTB33","antibody antibodydescription":"Kaiso (6F8) Mouse monoclonal IgG1. 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Antibody Target: RFX5","antibody targetdescription":"Activates transcription from class II MHC promoters. Recognizes X-boxes. Mediates cooperative binding betweenRFX and NF-Y. RFX binds the X1 box of MHC-II promoters","antibody vendorname":"Rockland Immunochemicals","antibody vendorid":"200-401-194","control":"IgG-mus","control description":"Input signal from Normal Mouse IgG ChIP-seq.","controlid":"wgEncodeEH000706","replicate":"1","original_filename":"GSM935556_hg19_wgEncodeSydhTfbsGm12878Rfx5200401194IggmusSig.bigWig"},"geolst":["GSM935556"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 FOXM1","url":"http://egg.wustl.edu/d/hg19/GSM1010731_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24692","30015"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"Rabbit polyclonal IgG, epitope mapping at the C-terminus of FOXM1 of human origin. Antibody Target: FOXM1","antibody targetdescription":"The protein encoded by this gene is a transcriptional activator involved in cell proliferation. The encoded protein is phosphorylated in M phase and regulates the expression of several cell cycle genes, such as cyclin B1 and cyclin D1. Several transcript variants encoding different isoforms have been found for this gene. 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Antibody Target: EZH2","antibody targetdescription":"EZH2 (Enhancer of Zeste homolog 2, also designated Enx1 and SETDB1) is a human homolog of the Drosophila Polycomb-group protein Enhancer of Zeste protein. It contains a SET domain that catalyzes the methylation of histone H3 at lysine 27 (Histone H3 Lys27 monomethylated, dimethylated and trimethylated). Polycomb-group proteins repress gene expression by binding to chromatin and locally altering chromatin structure. EZH2, BMI-1 and Suz12 are present in the PRC2 and PRC3 protein complexes that function as mediators of epigenetic transcriptional silencing. EZH2 associates with the embryonic ectoderm development protein, the VAV1 oncoprotein, and the X-linked nuclear protein. EZH2 may play a role in the hematopoietic and central nervous systems. Deregulation of EZH2 is linked to a variety of cancers.","antibody vendorname":"Active Motif","antibody vendorid":"39875","controlid":"GM12878/Input/std","replicate":"1,2","softwareversion":"ScriptureVPaperR3","cell sex":"F","antibody":"EZH2_(39875)","treatment":"None","treatment description":"No special treatment or protocol applies","control":"std","control description":"Standard input signal for most experiments.","original_filename":"GSM1003498_hg19_wgEncodeBroadHistoneGm12878Ezh239875Sig.bigWig"},"geolst":["GSM1003498"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 Pbx3","url":"http://egg.wustl.edu/d/hg19/GSM803532_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24067","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"Pbx3","antibody antibodydescription":"Rabbit Polyclonal IgG","antibody targetdescription":"Pbx 3 (D-17)","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-891","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"PCR1x","protocol description":"1-cycle of PCR (Myers)","controlid":"SL516","labexpid":"SL615","replicate":"1","replicate description":"tier 1","original_filename":"GSM803532_hg19_wgEncodeHaibTfbsGm12878Pbx3Pcr1xRawRep1.bigWig"},"geolst":["GSM803532"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 Pbx3","url":"http://egg.wustl.edu/d/hg19/GSM803532_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24067","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"Pbx3","antibody antibodydescription":"Rabbit Polyclonal IgG","antibody targetdescription":"Pbx 3 (D-17)","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-891","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"PCR1x","protocol description":"1-cycle of PCR (Myers)","controlid":"SL516","labexpid":"SL615","replicate":"1","replicate description":"tier 1","original_filename":"GSM803532_hg19_wgEncodeHaibTfbsGm12878Pbx3Pcr1xRawRep2.bigWig"},"geolst":["GSM803532"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 POU2F2","url":"http://egg.wustl.edu/d/hg19/GSM803534_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24040","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"POU2F2","antibody antibodydescription":"Oct-2(C-20) is an affinity purified rabbit polyclonal antibody raised against a peptide mapping at the C-terminus of Oct-2 of human origin. 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Isoform 5 activates the U2 small nuclear RNA (snRNA) promoter.","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-233","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"PCR1x","protocol description":"1-cycle of PCR (Myers)","controlid":"SL516","labexpid":"SL614","replicate":"1","replicate description":"tier 1","original_filename":"GSM803534_hg19_wgEncodeHaibTfbsGm12878Pou2f2Pcr1xRawRep1.bigWig"},"geolst":["GSM803534"]},{"type":"bigWig","name":"Yale ChipSeq GM12878 Pol3","url":"http://egg.wustl.edu/d/hg19/GSM935316_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24621","30017"],"details":{"lab":"Yale","lab description":"Snyder - Yale University","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12878","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"Pol3","antibody antibodydescription":"mouse monoclonal IgG1. Antibody Target: POL3","antibody targetdescription":"RNA Polymerase III","antibody vendorname":"Santa Cruz Biotech","antibody vendorid":"sc-21754","control":"std","control description":"Standard input signal for most experiments.","controlid":"wgEncodeEH000625","labversion":"Incomplete fastq due to Illumina pipeline version","replicate":"1","original_filename":"GSM935316_hg19_wgEncodeSydhTfbsGm12878Pol3StdSig.bigWig"},"geolst":["GSM935316"]},{"type":"bigWig","name":"Stanford ChipSeq GM12878 Mxi1","url":"http://egg.wustl.edu/d/hg19/GSM935431_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24623","30018"],"details":{"lab":"Stanford","lab description":"Snyder - Stanford University","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12878","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"Mxi1_(AF4185)","antibody antibodydescription":"Goat IgG. Raised against E. coli-derived rhMxi1. Antibody Target: Mxi1","antibody targetdescription":"Transcriptional repressor. Binds with MAX to form recognize the core sequence 5'-CAC[GA]TG-3', antagonizes MYC transcriptional activity by competing for MAX","antibody vendorname":"R&D Systems","antibody vendorid":"AF4185","control":"IgG-mus","control description":"Input signal from Normal Mouse IgG ChIP-seq.","controlid":"wgEncodeEH000706","replicate":"1","original_filename":"GSM935431_hg19_wgEncodeSydhTfbsGm12878Mxi1IggmusSig.bigWig"},"geolst":["GSM935431"]},{"type":"bigWig","name":"Stanford ChipSeq GM12878 SMC3","url":"http://egg.wustl.edu/d/hg19/GSM935376_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24613","30018"],"details":{"lab":"Stanford","lab description":"Snyder - Stanford University","datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","cell":"GM12878","cell organism":"human","cell description":"B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","treatment":"None","treatment description":"No special treatment or protocol applies","antibody":"SMC3_(ab9263)","antibody antibodydescription":"Rabbit polyclonal raised against synthetic peptide representing a portion within the last 100 amino acids of the human Structural Maintenance of Chromosomes-3 conjugated to KLH. 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The cohesin complex is required for the cohesion of sister chromatids after DNA replication.","antibody vendorname":"Abcam","antibody vendorid":"ab9263","control":"IgG-mus","control description":"Input signal from Normal Mouse IgG ChIP-seq.","controlid":"wgEncodeEH000706","replicate":"1","original_filename":"GSM935376_hg19_wgEncodeSydhTfbsGm12878Smc3ab9263IggmusSig.bigWig"},"geolst":["GSM935376"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 USF-1","url":"http://egg.wustl.edu/d/hg19/GSM803347_2.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24022","30015"],"details":{"lab":"HudsonAlpha","lab description":"Myers - Hudson Alpha Institute for Biotechnology","datatype":"ChipSeq","datatype description":"ChIP-Seq","cell":"GM12878","cell organism":"human","cell description":"lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus","cell karyotype":"normal","cell lineage":"mesoderm","cell sex":"F","antibody":"USF-1","antibody antibodydescription":"Rabbit polyclonal, USF-1 (C-20).","antibody targetdescription":"The ubiquitously expressed cellular upstream stimulatory factor (USF) consists of USF-1 and USF-2 polypeptides which independently exhibit site-specific DNA binding and are members of the c-Myc-related family of regulatory factors containing helix-loop-helix domains. 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DsRNA leads to IRF3 phosphorylation on the C-terminal serine/threonine cluster. 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These proteins are individually capable of activating transcription and replication.","antibody vendorname":"Santa Cruz Biotechnology","antibody vendorid":"sc-81335","controlid":"SL6022","labexpid":"SL8083,SL8392","softwareversion":"MACS","cell sex":"F","antibody":"NFIC_(SC-81335)","treatment":"None","treatment description":"No special treatment or protocol applies","protocol":"v042211.1","protocol description":"Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)","replicate":"1,2","original_filename":"GSM1010881_hg19_wgEncodeHaibTfbsGm12878Nficsc81335V0422111RawRep2.bigWig"},"geolst":["GSM1010881"]},{"type":"bigWig","name":"HudsonAlpha ChipSeq GM12878 NFIC","url":"http://egg.wustl.edu/d/hg19/GSM1010881_1.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":0,"pb":230,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":10,"summeth":1,"__pr":0,"__pg":0,"__pb":230,"__nr":255,"__ng":0,"__nb":0},"annotation":["13047","24683","30015"],"details":{"datatype":"ChipSeq","datatype description":"Chromatin IP Sequencing","antibody antibodydescription":"Mouse monoclonal IgG, raised against a recombinant protein corresponding to an internal region of NF-1 of human origin. 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