[{"type":"bigWig","name":"Cortex1","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/MidFrontal_Cortex_GSM1204459.bw","mode":1,"qtc":{"anglescale":1,"pr":102,"pg":102,"pb":102,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1,"bg":null}},{"type":"bigWig","name":"Cortex2","url":"http://wangftp.wustl.edu/~bzhang/Cancer_Enhancer/MidFrontal_Cortex_GSM1204460.bw","mode":1,"qtc":{"anglescale":1,"pr":102,"pg":102,"pb":102,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":0,"thmin":0,"thmax":10,"thpercentile":90,"height":25,"summeth":1,"bg":null}},{"type":"bigWig","name":"MeDIP-Seq of fetal brain","url":"http://egg.wustl.edu/d/hg19/GSM669614.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":153,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":1,"thmin":0,"thmax":60,"thpercentile":90,"height":25,"summeth":1,"smooth":5},"annotation":["12003","21003","30014","40115","60002","70009"],"details":{"sample_alias":"Brain HuFNSC01"," sample_common_name":"Fetal Brain","disease":"None","biomaterial_provider":"Keith Ligon, Harvard","biomaterial_type":"Primary Tissue","tissue_type":"Brain","tissue_depot":"NA","collection_method":"NA","donor_id":"HuFNSC01","donor_age":"17GW","donor_health_status":"Disease Free","donor_sex":"Female","donor_ethnicity":"NA","note":"Twin of HuFNSC02","experiment_type":"DNA Methylation","extraction_protocol":"Costello Lab MeDIP Protocol","extraction_protocol_type_of_sonicator":"Diagenode Bioruptor","extraction_protocol_sonication_cycles":"25min","medip_protocol":"Costello Lab MeDIP Protocol","medip_protocol_dna_amount":"2ug","medip_protocol_bead_type":"Protein A/G","medip_protocol_bead_amount":"100ul","medip_protocol_antibody_amount":"1ug","medip_antibody":"Methylcytidine","medip_antibody_provider":"Eurogentec","medip_antibody_catalog":"BI-MECY-0100","medip_antibody_lot":"80808","original_filename":"GSM669614_UCSF-UBC.Fetal_Brain.MeDIP-Seq.HuFNSC01.bigWig","Embargo end date":"2011-12-31"},"geolst":["GSM669614"]},{"type":"bigWig","name":"MRE-Seq of fetal brain","url":"http://egg.wustl.edu/d/hg19/GSM669604.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":100,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"rgb(0, 128, 0)","nth":"#800000","thtype":1,"thmin":0,"thmax":350,"thpercentile":90,"height":25,"summeth":1},"annotation":["12003","21001","30014","40115","60002","70009"],"details":{"sample_alias":"Brain HuFNSC01"," sample_common_name":"Fetal Brain","disease":"None","biomaterial_provider":"Keith Ligon, Harvard","biomaterial_type":"Primary Tissue","tissue_type":"Brain","tissue_depot":"NA","collection_method":"NA","donor_id":"HuFNSC01","donor_age":"17GW","donor_health_status":"Disease Free","donor_sex":"Female","donor_ethnicity":"NA","note":"Twin of HuFNSC02","experiment_type":"DNA Methylation","mre_protocol":"Costello Lab MRE Protocol","mre_protocol_chromatin_amount":"3ug","mre_protocol_restriction_enzyme":"HpaII, Hin6I, AciI","mre_protocol_size_fraction":"27-281bp","original_filename":"GSM669604_UCSF-UBC.Fetal_Brain.MRE-Seq.HuFNSC01.bigWig","Embargo end date":"2011-12-31"},"geolst":["GSM669604"]},{"type":"bigWig","name":"MeDIP-Seq of fetal brain","url":"http://egg.wustl.edu/d/hg19/GSM669615.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":153,"pg":0,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"#ffff00","nth":"#800000","thtype":1,"thmin":0,"thmax":60,"thpercentile":90,"height":25,"summeth":1,"smooth":5},"annotation":["12003","21003","30014","40116","60002","70009"],"details":{"sample_alias":"Brain HuFNSC02"," sample_common_name":"Fetal Brain","disease":"None","biomaterial_provider":"Keith Ligon, Harvard","biomaterial_type":"Primary Tissue","tissue_type":"Brain","tissue_depot":"NA","collection_method":"NA","donor_id":"HuFNSC02","donor_age":"17GW","donor_health_status":"Disease Free","donor_sex":"Female","donor_ethnicity":"NA","note":"Twin of HuFNSC01","experiment_type":"DNA Methylation","extraction_protocol":"Costello Lab MeDIP Protocol","extraction_protocol_type_of_sonicator":"Diagenode Bioruptor","extraction_protocol_sonication_cycles":"25min","medip_protocol":"Costello Lab MeDIP Protocol","medip_protocol_dna_amount":"2ug","medip_protocol_bead_type":"Protein A/G","medip_protocol_bead_amount":"100ul","medip_protocol_antibody_amount":"1ug","medip_antibody":"Methylcytidine","medip_antibody_provider":"Eurogentec","medip_antibody_catalog":"BI-MECY-0100","medip_antibody_lot":"80808","original_filename":"GSM669615_UCSF-UBC.Fetal_Brain.MeDIP-Seq.HuFNSC02.bigWig","Embargo end date":"2011-12-31"},"geolst":["GSM669615"]},{"type":"bigWig","name":"MRE-Seq of fetal brain","url":"http://egg.wustl.edu/d/hg19/GSM669605.bigWig","public":true,"mode":1,"qtc":{"anglescale":1,"pr":0,"pg":100,"pb":0,"nr":255,"ng":0,"nb":0,"pth":"rgb(0, 128, 0)","nth":"#800000","thtype":1,"thmin":0,"thmax":350,"thpercentile":90,"height":25,"summeth":1},"annotation":["12003","21001","30014","40116","60002","70009"],"details":{"sample_alias":"Brain HuFNSC02"," sample_common_name":"Fetal Brain","disease":"None","biomaterial_provider":"Keith Ligon, Harvard","biomaterial_type":"Primary Tissue","tissue_type":"Brain","tissue_depot":"NA","collection_method":"NA","donor_id":"HuFNSC02","donor_age":"17GW","donor_health_status":"Disease Free","donor_sex":"Female","donor_ethnicity":"NA","note":"Twin of HuFNSC01","experiment_type":"DNA Methylation","mre_protocol":"Costello Lab MRE Protocol","mre_protocol_chromatin_amount":"3ug","mre_protocol_restriction_enzyme":"HpaII, Hin6I, AciI","mre_protocol_size_fraction":"31-267bp","original_filename":"GSM669605_UCSF-UBC.Fetal_Brain.MRE-Seq.HuFNSC02.bigWig","Embargo end date":"2011-12-31"},"geolst":["GSM669605"]},{"type":"BED","name":"450K_Infi","url":"http://wangftp.wustl.edu/~bzhang/SEV/Infi_450k_N.bed.gz","mode":6,"qtc":{"anglescale":1,"pr":0,"pg":77,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"#000000","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"#008000"}},{"type":"native_track","list":[{"name":"rmsk_ensemble","mode":1,"qtc":{"anglescale":1,"height":25},"categories":{"1":["SINE - short interspersed nuclear elements","#cc0000"],"2":["LINE - long interspersed nuclear element","#FF6600"],"3":["LTR - long terminal repeat element","#006600"],"4":["DNA transposon","#4A72E8"],"5":["Simple repeat, micro-satellite","#AB833B"],"6":["Satellite repeat","#660000"],"7":["Low complexity repeat","#663333"],"8":["RNA repeat","#cc33ff"],"9":["Other repeats","#488E8E"],"10":["Unknown","#5C5C5C"],"-1":["no information","transparent"]}},{"name":"refGene","mode":3,"qtc":{"anglescale":1,"pr":0,"pg":77,"pb":0,"nr":0,"ng":0,"nb":230,"pth":"#800000","nth":"#000099","thtype":0,"thmin":0,"thmax":10,"thpercentile":95,"height":50,"summeth":1,"textcolor":"rgb(0,0,0)","fontsize":"8pt","fontfamily":"sans-serif","fontbold":false,"bedcolor":"rgb(0,77,153)"}}]},{"type":"coordinate_override","coord":"chr13,100614950,chr13,100646691"},{"type":"native_metadata_terms","list":["Assay","Sample","Donor Identifier"]}]